HHsearch results for GI: 254780183 and protein with PDBid: 2hpi_A
>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=94.86 E-value=0.057 Score=30.78 Aligned_cols=80 Identities=16% Similarity=0.267 Sum_probs=56.1
Q ss_pred CEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 37999964258866798699986999999834564202688453011243021101589877221104771599984133
Q gi|254780183|r 6 NKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVYIEGSLQ 85 (159)
Q Consensus 6 N~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~V~Grl~ 85 (159)
..|.+.|-|.. ...+.|.+|..++-++| .|.+.-+.|++|.+.+ +.....|+.|..|+|+|++.
T Consensus 1043 ~~v~vaG~I~~-v~~~~TKkG~~maf~tl--------------eD~tG~iev~vF~~~y-~~~~~~L~~~~~l~v~G~v~ 1106 (1220)
T 2hpi_A 1043 PKVLLSGMVEE-VVRKPTRSGGMMARFTL--------------SDETGALEVVVFGRAY-EGVSPKLKEDIPLLVLAEVE 1106 (1220)
T ss_dssp CEEEEEEEECC-C------------CEEE--------------EETTEEEEEC--------------CTTCEEEEEEEEC
T ss_pred CEEEEEEEEEE-EEECCCCCCCEEEEEEE--------------EECCCCEEEEECHHHH-HHHHHHHCCCCEEEEEEEEE
T ss_conf 88999999978-89732799996999999--------------9899988999837999-99988753598799999999
Q ss_pred CCCCCCCCCCEEEEEEEEEEEEEECC
Q ss_conf 33320468837688999997769846
Q gi|254780183|r 86 TRKWQDQSGNNRYTTEIIMRSMVMLD 111 (159)
Q Consensus 86 ~~~~~~kdG~~r~~~~V~a~~i~~l~ 111 (159)
. .+| +.|+|++|.-|+
T Consensus 1107 ~-----~~~-----~~i~~~~i~~L~ 1122 (1220)
T 2hpi_A 1107 K-----GEE-----LRVLAQAVWTLE 1122 (1220)
T ss_dssp ---------------CEEEEEEEEHH
T ss_pred E-----CCC-----EEEEEEECCCHH
T ss_conf 8-----994-----489983515599