HHsearch results for GI: 254780183 and protein with PDBid: 2hpi_A

>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=94.86  E-value=0.057  Score=30.78  Aligned_cols=80  Identities=16%  Similarity=0.267  Sum_probs=56.1

Q ss_pred             CEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf             37999964258866798699986999999834564202688453011243021101589877221104771599984133
Q gi|254780183|r    6 NKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVYIEGSLQ   85 (159)
Q Consensus         6 N~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~V~Grl~   85 (159)
                      ..|.+.|-|.. ...+.|.+|..++-++|              .|.+.-+.|++|.+.+ +.....|+.|..|+|+|++.
T Consensus      1043 ~~v~vaG~I~~-v~~~~TKkG~~maf~tl--------------eD~tG~iev~vF~~~y-~~~~~~L~~~~~l~v~G~v~ 1106 (1220)
T 2hpi_A         1043 PKVLLSGMVEE-VVRKPTRSGGMMARFTL--------------SDETGALEVVVFGRAY-EGVSPKLKEDIPLLVLAEVE 1106 (1220)
T ss_dssp             CEEEEEEEECC-C------------CEEE--------------EETTEEEEEC--------------CTTCEEEEEEEEC
T ss_pred             CEEEEEEEEEE-EEECCCCCCCEEEEEEE--------------EECCCCEEEEECHHHH-HHHHHHHCCCCEEEEEEEEE
T ss_conf             88999999978-89732799996999999--------------9899988999837999-99988753598799999999


Q ss_pred             CCCCCCCCCCEEEEEEEEEEEEEECC
Q ss_conf             33320468837688999997769846
Q gi|254780183|r   86 TRKWQDQSGNNRYTTEIIMRSMVMLD  111 (159)
Q Consensus        86 ~~~~~~kdG~~r~~~~V~a~~i~~l~  111 (159)
                      .     .+|     +.|+|++|.-|+
T Consensus      1107 ~-----~~~-----~~i~~~~i~~L~ 1122 (1220)
T 2hpi_A         1107 K-----GEE-----LRVLAQAVWTLE 1122 (1220)
T ss_dssp             ---------------CEEEEEEEEHH
T ss_pred             E-----CCC-----EEEEEEECCCHH
T ss_conf             8-----994-----489983515599