HHsearch results for GI: 254780183 and protein with PDBid: 3f2b_A
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=95.45 E-value=0.13 Score=28.61 Aligned_cols=87 Identities=22% Similarity=0.345 Sum_probs=61.1
Q ss_pred CCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHH--HHHHHHHHHCCCCCEEEE
Q ss_conf 778379999642588667986999869999998345642026884530112430211015--898772211047715999
Q gi|254780183|r 3 ASLNKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSE--ELCRIVEQYLRKGSKVYI 80 (159)
Q Consensus 3 ~~mN~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~--~~Ae~~~~~l~KG~~V~V 80 (159)
..+++|++-|.|-. .|.|.+.+|+.+.+|.|. |.|+=+.|+.|-+ ...+.+ ..++||+-|.|
T Consensus 15 ~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~--------------d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 78 (1041)
T 3f2b_A 15 EEERRVVVQGYVFD-AEVSELKSGRTLLTMKIT--------------DYTNSILVKMFSRDKEDAELM-SGVKKGMWVKV 78 (1041)
T ss_dssp SCEEEEEEEEEEEE-EEEEECTTSCEEEEEEEE--------------CSSCEEEEEEECSSHHHHHHH-HTCCTTCEEEE
T ss_pred CCCCEEEEEEEEEE-EEEEEECCCCEEEEEEEE--------------ECCCCEEEEEECCCCCHHHHH-HCCCCCCEEEE
T ss_conf 73666999999998-776860489889999998--------------268868999955874408898-40679968999
Q ss_pred EECCCCCCCCCCCCCEEEEEEEEEEEEEECCC
Q ss_conf 84133333204688376889999977698466
Q gi|254780183|r 81 EGSLQTRKWQDQSGNNRYTTEIIMRSMVMLDG 112 (159)
Q Consensus 81 ~Grl~~~~~~~kdG~~r~~~~V~a~~i~~l~~ 112 (159)
.|.+..++|. + .+.+.+..+..+..
T Consensus 79 ~g~~~~~~~~-~------~~~~~~~~~~~~~~ 103 (1041)
T 3f2b_A 79 RGSVQNDTFV-R------DLVIIANDLNEIAA 103 (1041)
T ss_dssp EEEEEEETTT-T------EEEEEEEEEEEECC
T ss_pred EEEEECCCCC-C------CEEEEEEEEEECCC
T ss_conf 9988515777-7------41797101365577