HHsearch results for GI: 254780183 and protein with PDBid: 3k81_C
>3k81_C MP18 RNA editing complex protein; krepa6, single domain antibody, immune system, RNA BIND protein; 3.40A {Trypanosoma brucei}
Probab=99.97 E-value=1.6e-31 Score=206.75 Aligned_cols=111 Identities=21% Similarity=0.316 Sum_probs=98.2
Q ss_pred CCCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 87783799996425886679869998699999983456420268845301124302110158987722110477159998
Q gi|254780183|r 2 VASLNKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVYIE 81 (159)
Q Consensus 2 m~~mN~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~V~ 81 (159)
+.++|+|+|+||| .|||+++. +|.+|++|+||++++|+++.+++++++|+||+|+|||+.+|+.+.+||+||++|+|+
T Consensus 19 ~rsvNkV~LiG~v-~d~e~~~~-~~~~V~~FslAt~~~~~~~~~ge~~e~Tewh~Vv~fg~~lae~~~~yl~KG~~V~Ve 96 (164)
T 3k81_C 19 CKSVNSVTLVGVV-HDIQSGFV-YEDAVTQFTLTTTSIDTTHPTQEVVVEKDHHTIRCFGELFSAEVKQKVKEGNVVCVN 96 (164)
T ss_dssp -CCEEEEEEEEEE-ECCCCEES-SSCEECCEEEEECCC--------CCCCCEEEEEEECCHHHHHHHHHHCCTTCEEEEC
T ss_pred CCCCCEEEEEEEC-CCCCCCCC-CCCCEEEEEEECCCCEEECCCCCEEEEEEEEEEEEECHHHHHHHHHHHCCCCEEEEE
T ss_conf 3774189999836-99532242-897379999850565030789741000107999998879999999870689999999
Q ss_pred ECCCCCCCCCCCCCEEEEEEEE-EE----EEEECCCCC
Q ss_conf 4133333204688376889999-97----769846677
Q gi|254780183|r 82 GSLQTRKWQDQSGNNRYTTEII-MR----SMVMLDGRR 114 (159)
Q Consensus 82 Grl~~~~~~~kdG~~r~~~~V~-a~----~i~~l~~~~ 114 (159)
|+|++++|+|++|.++|+++++ +. .+.+|.+..
T Consensus 97 G~Lrtr~~~D~~g~k~~~~~~I~v~~~~g~~~~l~~~~ 134 (164)
T 3k81_C 97 GRLRLSPQLEPSCNKHFYFPYIQVQPPHGQVAVIHGDR 134 (164)
T ss_dssp CEEEEECCCCSSCSCCCCEEEEEECTTTCCEEEECC--
T ss_pred EEEEEEEEECCCCCEEEEEEEEEEECCCCEEEEECCCC
T ss_conf 99886757868999898989999967888077813888