HHsearch results for GI: 254780183 and protein with PDBid: 3lgj_A

>3lgj_A Single-stranded DNA-binding protein; niaid, CAT scratch fever, rochalimaea, LYME disease, ALS collaborative crystallography, DNA replication; 2.50A {Bartonella henselae}
Probab=100.00  E-value=3.6e-36  Score=234.42  Aligned_cols=144  Identities=41%  Similarity=0.738  Sum_probs=111.2

Q ss_pred             CCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEE-ECCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             7783799996425886679869998699999983456420268845301124-302110158987722110477159998
Q gi|254780183|r    3 ASLNKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEW-HSVIVFSEELCRIVEQYLRKGSKVYIE   81 (159)
Q Consensus         3 ~~mN~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~-~~v~~~g~~~Ae~~~~~l~KG~~V~V~   81 (159)
                      +-||+|+|+|||++|||||++++|.++++|+||++++|+++.++.|.+.+.| +.|++|+ ++|+++.++|+||++|+|+
T Consensus        21 ~mmN~v~LiGrlg~DPelr~t~sG~~v~~fsvAv~~~~~~~~~~~~~~~t~~~~~v~~~~-~~Ae~~~~~l~KG~~V~V~   99 (169)
T 3lgj_A           21 SMLNKVMLIGYLGDDPESKTMTSGAEVVNFRMATFESYMNKNTHQKVEKTEWHSVVVFNP-HFAKIALQYLHKGSKVYIE   99 (169)
T ss_dssp             CCEEEEEEEEEESSCCEEEECTTSCEEEEEEEEEEC------------CEEEEEEEECCH-HHHHHHHHHCCTTCEEEEE
T ss_pred             CEEEEEEEEEECCCCCEEEECCCCCEEEEEEEEECCCEECCCCCCCCCCCEEEEEEEEEC-HHHHHHHHHCCCCCEEEEE
T ss_conf             644789999986779889987899879999998714410134310267851899999961-4778998650248689999


Q ss_pred             ECCCCCCCCCCCCCEEEEEEEEEEEE----EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             41333332046883768899999776----98466777666677777777667776556666667654456778774557
Q gi|254780183|r   82 GSLQTRKWQDQSGNNRYTTEIIMRSM----VMLDGRRDSLQGEEQRSEQHSNNLKENVVGNRYSSPREESVFSDELDDEI  157 (159)
Q Consensus        82 Grl~~~~~~~kdG~~r~~~~V~a~~i----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dDdi  157 (159)
                      |+|++++|++++|++|+.++|+|+.+    .+++++............            +..+.+..........||||
T Consensus       100 G~l~~~~~~dkdG~~r~~~eI~a~~~~~~~~~l~~k~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~dDdi  167 (169)
T 3lgj_A          100 GKLQTRKWQDKNGHDRYTTEIVLPQYKGELHLLDAKKEQSASSSSVTS------------QSYAIASGADDYGISAHDSM  167 (169)
T ss_dssp             EEEEEECC--------CEEEEEECTTCCEEEEECC---------------------------------------------
T ss_pred             EEEEEEEEECCCCCEEEEEEEEEEEECCCEEECCCCCCCCCCCCCCCC------------CCCCCCCCCCCCCCCCCCCC
T ss_conf             687746788079957999999998403727887778777778888788------------88777788877788877899


Q ss_pred             CC
Q ss_conf             98
Q gi|254780183|r  158 PF  159 (159)
Q Consensus       158 PF  159 (159)
                      ||
T Consensus       168 PF  169 (169)
T 3lgj_A          168 PF  169 (169)
T ss_dssp             --
T ss_pred             CC
T ss_conf             98