HHsearch results for GI: 254780183 and protein with PDBid: 3lgj_A
>3lgj_A Single-stranded DNA-binding protein; niaid, CAT scratch fever, rochalimaea, LYME disease, ALS collaborative crystallography, DNA replication; 2.50A {Bartonella henselae}
Probab=100.00 E-value=3.6e-36 Score=234.42 Aligned_cols=144 Identities=41% Similarity=0.738 Sum_probs=111.2
Q ss_pred CCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEE-ECCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 7783799996425886679869998699999983456420268845301124-302110158987722110477159998
Q gi|254780183|r 3 ASLNKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEW-HSVIVFSEELCRIVEQYLRKGSKVYIE 81 (159)
Q Consensus 3 ~~mN~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~-~~v~~~g~~~Ae~~~~~l~KG~~V~V~ 81 (159)
+-||+|+|+|||++|||||++++|.++++|+||++++|+++.++.|.+.+.| +.|++|+ ++|+++.++|+||++|+|+
T Consensus 21 ~mmN~v~LiGrlg~DPelr~t~sG~~v~~fsvAv~~~~~~~~~~~~~~~t~~~~~v~~~~-~~Ae~~~~~l~KG~~V~V~ 99 (169)
T 3lgj_A 21 SMLNKVMLIGYLGDDPESKTMTSGAEVVNFRMATFESYMNKNTHQKVEKTEWHSVVVFNP-HFAKIALQYLHKGSKVYIE 99 (169)
T ss_dssp CCEEEEEEEEEESSCCEEEECTTSCEEEEEEEEEEC------------CEEEEEEEECCH-HHHHHHHHHCCTTCEEEEE
T ss_pred CEEEEEEEEEECCCCCEEEECCCCCEEEEEEEEECCCEECCCCCCCCCCCEEEEEEEEEC-HHHHHHHHHCCCCCEEEEE
T ss_conf 644789999986779889987899879999998714410134310267851899999961-4778998650248689999
Q ss_pred ECCCCCCCCCCCCCEEEEEEEEEEEE----EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 41333332046883768899999776----98466777666677777777667776556666667654456778774557
Q gi|254780183|r 82 GSLQTRKWQDQSGNNRYTTEIIMRSM----VMLDGRRDSLQGEEQRSEQHSNNLKENVVGNRYSSPREESVFSDELDDEI 157 (159)
Q Consensus 82 Grl~~~~~~~kdG~~r~~~~V~a~~i----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dDdi 157 (159)
|+|++++|++++|++|+.++|+|+.+ .+++++............ +..+.+..........||||
T Consensus 100 G~l~~~~~~dkdG~~r~~~eI~a~~~~~~~~~l~~k~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~dDdi 167 (169)
T 3lgj_A 100 GKLQTRKWQDKNGHDRYTTEIVLPQYKGELHLLDAKKEQSASSSSVTS------------QSYAIASGADDYGISAHDSM 167 (169)
T ss_dssp EEEEEECC--------CEEEEEECTTCCEEEEECC---------------------------------------------
T ss_pred EEEEEEEEECCCCCEEEEEEEEEEEECCCEEECCCCCCCCCCCCCCCC------------CCCCCCCCCCCCCCCCCCCC
T ss_conf 687746788079957999999998403727887778777778888788------------88777788877788877899
Q ss_pred CC
Q ss_conf 98
Q gi|254780183|r 158 PF 159 (159)
Q Consensus 158 PF 159 (159)
||
T Consensus 168 PF 169 (169)
T 3lgj_A 168 PF 169 (169)
T ss_dssp --
T ss_pred CC
T ss_conf 98