HHSEARCH alignment of GI: 254780183 and SCOP domain: d1se8a_

Alignment
>d1se8a_ b.40.4.3 (A:) ssDNA-binding protein {Deinococcus radiodurans [TaxId: 1299]}
Probab=100.00  E-value=3.2e-33  Score=215.46  Aligned_cols=120  Identities=24%  Similarity=0.409  Sum_probs=103.2

Q ss_pred             CCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHH-HHCCCCCEEEEE
Q ss_conf             7783799996425886679869998699999983456420268845301124302110158987722-110477159998
Q gi|254780183|r    3 ASLNKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVE-QYLRKGSKVYIE   81 (159)
Q Consensus         3 ~~mN~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~-~~l~KG~~V~V~   81 (159)
                      .+||+|+|+|||++|||+|++++|.++++|+||++++|+++. +++++.|+||+|++||+ +|++++ .||+||++|+|+
T Consensus         1 r~mN~v~l~G~l~~dpe~r~t~~G~~~~~f~lA~~~~~~~~~-g~~~~~t~~~~v~~~g~-~Ae~~~~~~l~KG~~V~V~   78 (231)
T d1se8a_           1 RGMNHVYLIGALARDPELRYTGNGMAVFEATVAGEDRVIGND-GRERNLPWYHRVSILGK-PAEWQAERNLKGGDAVVVE   78 (231)
T ss_dssp             CCEEEEEEEEEESSCCEEEECTTSCEEEEEEEEEEEEC--------CEEEEEEEEEEESH-HHHHHHHTCCCTTCEEEEE
T ss_pred             CCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCEECCC-CCEEEEEEEEEEEEECC-HHHHHHHHCCCCCCEEEEE
T ss_conf             984499999997769889987999889999999789678799-87986200566888670-4655023116899999999


Q ss_pred             ECCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCC
Q ss_conf             4133333204688376889999977698466777666677777
Q gi|254780183|r   82 GSLQTRKWQDQSGNNRYTTEIIMRSMVMLDGRRDSLQGEEQRS  124 (159)
Q Consensus        82 Grl~~~~~~~kdG~~r~~~~V~a~~i~~l~~~~~~~~~~~~~~  124 (159)
                      |+|+.++|+++||++|+.++|+|++|.||+++..........+
T Consensus        79 G~l~~~~~~~~dG~~r~~~~i~a~~v~~l~~~~~~~~~~~~~~  121 (231)
T d1se8a_          79 GTLEYRQWEAPEGGKRSAVNVKALRMEQLGTQPELIQDAGGGV  121 (231)
T ss_dssp             EEEEEEEEC-----CEEEEEEEEEEEEECSSCCCEEECTTSCE
T ss_pred             EEEEEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCC
T ss_conf             9978503699999899999999999999358721133544554


SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Single strand DNA-binding domain, SSB
domain: ssDNA-binding protein
species: Deinococcus radiodurans [TaxId: 1299]