RPSBLAST alignment for GI: 254780184 and conserved domain: PRK00635

>gnl|CDD|167016 PRK00635, PRK00635, excinuclease ABC subunit A; Provisional. Length = 1809
 Score =  618 bits (1595), Expect = e-177
 Identities = 346/938 (36%), Positives = 526/938 (56%), Gaps = 47/938 (5%)

Query: 7   ISIRGAREHNLQNISIELPRNKLIVMTGVSGSGKSSLAFDTIHAEGQRRYVESLSTYARQ 66
           + + G    NL+NISIE    +++++TGVSGSGKSSLAFDTI+A G++RY+ +L ++   
Sbjct: 6   VRLSGITVRNLKNISIEFCPREIVLLTGVSGSGKSSLAFDTIYAAGRKRYLSTLPSFFAT 65

Query: 67  FLGTIKKPDVEQIDGLSPTISIEQKNTSHNPRSTVGTITEIHDYLRLLFARIGIPHSPTT 126
            L ++  P VE+I+GLSPTI+++Q + S +  +TVG+ TE++ +L LLF+  G    P T
Sbjct: 66  TLDSLPDPSVEKIEGLSPTIAVKQNHFSQHSHATVGSTTELNSHLALLFSLEGQARDPVT 125

Query: 127 GLPIESQTISQMADRLLSFEQGTRMYLLAPIVRNRKGEYKKELAEILKKGFQRVQIDGVF 186
             P+   +  ++   + +   GT++ LLAP+           + E L++GF +V+IDG  
Sbjct: 126 LHPLTLYSKEKILSTIAAIPDGTQITLLAPLPAKDI----LAIRECLRQGFTKVRIDGEI 181

Query: 187 YHISDAPDLDKKYKHTIEVVVDRIVVHENIRERIVNSLRTCLQLTNGLAIATIADSTFHN 246
             I             +++VVD ++ +E+   R+  SL T L + +G       + + H 
Sbjct: 182 SPIYKFLTSGIPEDVPVDIVVDTLIKNESNTARLKVSLFTALDIGHG-------ECSLHF 234

Query: 247 DEKTSPNLSHNSSDHILFSENLSCPVSGFSIAEIEPRIFSFNNPAGACHHCDGLGTRQKV 306
           D +              FS   + P +  +   + P++FS ++    C  C G G    +
Sbjct: 235 DNQKR-----------TFSTQATIPETQQTYTPLTPQLFSPHSLEDRCPQCQGSGIFISI 283

Query: 307 DEKLVIPNSKLALNNGAIAPWSNPLSAYHTNILTALGKDLGFSINDSWDLLSNENQQILL 366
           D+  +I  +     N      +     YHT I  +L   LGFS++  W  LS E Q I L
Sbjct: 284 DDPSLIQQNLSIEENCCPFAGNCSTYLYHT-IYQSLADSLGFSLSTPWKDLSPEIQNIFL 342

Query: 367 YGTKKNSIALARHK----KSSYSNLSFRGIIPTL-EK-RWSEADSSLLQEIIQRYMSSSP 420
           YG +   + +        K + ++  +RG++  + EK R+S   S  L +      S++ 
Sbjct: 343 YGKEGLVLPVRLFDGTLGKKTLTHKVWRGVLNEIGEKVRYSNKPSRYLPK----GTSATS 398

Query: 421 CTICHGYRLKDESLAVKIAGKHIGEIADMSIKKAQIWFEQLPTQITQKANKISESILKEI 480
           C  C G  L D + A    GK   E   MS+++  I+  QLP+    K+  I E +L+ +
Sbjct: 399 CPRCQGTGLGDYANAATWHGKTFAEFQQMSLQELFIFLSQLPS----KSLSIEE-VLQGL 453

Query: 481 QKRIHFLVEIGLDYLTLSRNSNMLSNGESQRIRLASQIGSALTGVLYILDEPSIGLHQRD 540
           + R+  L+++GL YLT  R    LS GE +R  LA  +G+ L G+ YILDEPSIGLH +D
Sbjct: 454 KSRLSILIDLGLPYLTPERALATLSGGEQERTALAKHLGAELIGITYILDEPSIGLHPQD 513

Query: 541 NTKLINTLKHLRDTGNTVIVVEHDEETMLAADHIVDIGPEAGINGGKIVAEGSPSQIIAH 600
             KLIN +K LRD GNTV++VEHDE+ +  AD I+DIGP AGI GG+++  GSP + +A 
Sbjct: 514 THKLINVIKKLRDQGNTVLLVEHDEQMISLADRIIDIGPGAGIFGGEVLFNGSPREFLAK 573

Query: 601 PTSLTGKYMSGKMSIKIPEKRRQYNPNRMIHVINARSNNLKNVTGSIPLGLFTAITGISG 660
             SLT KY+  +++I IPEKR   N    + +  A  +NLK++T S+PLG  T +TG+SG
Sbjct: 574 SDSLTAKYLRQELTIPIPEKRT--NSLGTLTLSKATKHNLKDLTISLPLGRLTVVTGVSG 631

Query: 661 GGKSTFLISTLYKAAARIIMGSKYNPGIYDRIDGLEYIDKVVSINQSPIGHTPRSNPATY 720
            GKS+ +  TL  A    I     +      I     I ++V I +   G + RS P TY
Sbjct: 632 SGKSSLINDTLVPAVEEFIEQGFCS---NLSIQWGA-ISRLVHITRDLPGRSQRSIPLTY 687

Query: 721 VGAFTPIRDLFSNLPESKACGYKAGCFSFNVKGGRCEVCEGNGVIKIAMHFLPDVYITCD 780
           + AF  +R+LF+  P SK  G     FSFN   G C  C+G G I    +      I C 
Sbjct: 688 IKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTS---IPCP 744

Query: 781 VCQGQRYNPETLQIRFKDKSIADVLSMTVDESLDFFAAIPTIHNKLTTLKEVGLGYIKIG 840
            C G+R+ P+ L++R+K K+IAD+L MT  E+  FF   P+IH K+  L  +GL Y+ +G
Sbjct: 745 SCLGKRFLPQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKIHALCSLGLDYLPLG 804

Query: 841 QSANTLSGGESQRVKLAKELSKQATGNTLYILDEPTTGLHYHDIAKLLNILHTLVDRGNS 900
           +  ++LSGGE QR+KLA EL   +   TLY+LDEPTTGLH HDI  L+ +L +L  +G++
Sbjct: 805 RPLSSLSGGEIQRLKLAYELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHT 864

Query: 901 IIVIEHNLEVIKTADWILDFGPEGGDGGGEIIASGPPE 938
           +++IEHN+ V+K AD++L+ GPEGG+ GG ++AS  PE
Sbjct: 865 VVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSPE 902