RPSBLAST alignment for GI: 254780184 and conserved domain: cd03224
>gnl|CDD|72983 cd03224, ABC_TM1139_LivF_branched, LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.. Length = 222
Score = 59.3 bits (144), Expect = 5e-09
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 20/146 (13%)
Query: 806 SMTVDESLDFFAAIPTIHNKLTTLKEVGLGYI-----KIGQSANTLSGGESQRVKLAKEL 860
+TV+E+L A + L+ V + Q A TLSGGE Q + +A+ L
Sbjct: 89 ELTVEENLLLGAYARRRAKRKARLERV-YELFPRLKERRKQLAGTLSGGEQQMLAIARAL 147
Query: 861 SKQATGNTLYILDEPTTGLHYHDIAKLLNILHTLVDRGNSIIVIEHNLEVI-KTAD--WI 917
+ L +LDEP+ GL + ++ + L D G +I+++E N + AD ++
Sbjct: 148 ---MSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYV 204
Query: 918 LDFGPEGGDGGGEIIASGPPEAIAKE 943
L+ G ++ G + +
Sbjct: 205 LE--------RGRVVLEGTAAELLAD 222