>gnl|CDD|72996 cd03237, ABC_RNaseL_inhibitor_domain2, The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.. Length = 246

 Score = 45.3 bits (107), Expect = 9e-05
 Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 16/166 (9%)

Query: 794 IRFKDKSIADVLSMTVDESLDFFAAIPTIHNKLTT--LKEVGLGYIKIGQSANTLSGGES 851
           + +K + I      TV + L         H    T   K + +  I + +    LSGGE 
Sbjct: 63  VSYKPQYIKADYEGTVRDLLSSITKDFYTHPYFKTEIAKPLQIEQI-LDREVPELSGGEL 121

Query: 852 QRVKLAKELSKQATGNTLYILDEPTTGLHYHDIAKLLNILHTLVDRGNS-IIVIEHNLEV 910
           QRV +A  LSK A    +Y+LDEP+  L          ++    +       V+EH++ +
Sbjct: 122 QRVAIAACLSKDA---DIYLLDEPSAYLDVEQRLMASKVIRRFAENNEKTAFVVEHDIIM 178

Query: 911 IK-TADWILDFGPEGGDGGGEIIASGPPEAIAKEPLSYTGKFLKSI 955
           I   AD ++ F  E    G     + PP+++     S   +FLK++
Sbjct: 179 IDYLADRLIVFEGEPSVNG----VANPPQSL----RSGMNRFLKNL 216