>gnl|CDD|72996 cd03237, ABC_RNaseL_inhibitor_domain2, The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.. Length = 246

 Score = 43.4 bits (102), Expect = 3e-04
 Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 15/135 (11%)

Query: 462 PTQITQKANKISESILKEIQKRI----HFLVEI----GLDYLTLSRNSNMLSNGESQRIR 513
           P  I          +L  I K      +F  EI     ++ + L R    LS GE QR+ 
Sbjct: 67  PQYIKADYEGTVRDLLSSITKDFYTHPYFKTEIAKPLQIEQI-LDREVPELSGGELQRVA 125

Query: 514 LASQIGSALTGVLYILDEPSIGLHQRDNTKLINTLKHLRDTGN-TVIVVEHD--EETMLA 570
           +A+ +       +Y+LDEPS  L           ++   +    T  VVEHD      L 
Sbjct: 126 IAACLSK--DADIYLLDEPSAYLDVEQRLMASKVIRRFAENNEKTAFVVEHDIIMIDYL- 182

Query: 571 ADHIVDIGPEAGING 585
           AD ++    E  +NG
Sbjct: 183 ADRLIVFEGEPSVNG 197