HHsearch alignment of GI: 254780185 and MMDB domain: 1r8g_A_

>1r8g_A (A:) Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli}
Probab=98.44  E-value=8.3e-06  Score=55.52  Aligned_cols=201  Identities=14%  Similarity=0.138  Sum_probs=114.5

Q ss_pred             CCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC--CC
Q ss_conf             5225773133089970677777865477666765457777775003655455635524446899999999998605--41
Q gi|254780185|r  123 GDTLLLGITTEFFVFDNVHCTISPIKSGFALESTEFLQNGNNKGYDSHAKSSYTLPPQDKLHDMRSEIVSALNNIG--VQ  200 (458)
Q Consensus       123 G~~~~~g~E~EF~Lf~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~~~~~~~~~~~~ei~~~l~~~G--i~  200 (458)
                      +-...+|+|.|+++++.......+.                                          .-..+..+|  ..
T Consensus         9 ~~~~~~GiE~E~~~Vd~~~~~~~~~------------------------------------------~~~ll~~l~~~~~   46 (372)
T 1r8g_A            9 SEPFTLGIELEXQVVNPPGYDLSQD------------------------------------------SSXLIDAVKNKIT   46 (372)
T ss_dssp             CCTTCEEEEEEEEEEETTTTEECSC------------------------------------------CHHHHTTTSSSCS
T ss_pred             CCCCCEEEEEEEEEECCCCCCCCCC------------------------------------------HHHHHHHHHCCCC
T ss_conf             9998348887663267998776775------------------------------------------6999997323246


Q ss_pred             CCCCCCCCCCHHHCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHCCCEEE---EEE-----------EEC-----------
Q ss_conf             12221335621210365556-6888776999999999999874497544---412-----------101-----------
Q gi|254780185|r  201 ITKYHNQINDAQHSFGLQSE-SLLHASDNLQKYKYSVHQVANSYCKIAT---FMP-----------KPI-----------  254 (458)
Q Consensus       201 ie~~h~E~gpGQ~Ei~~~~~-~~l~aAD~~~~~k~~ik~iA~~~G~~AT---Fmp-----------KP~-----------  254 (458)
                      -..+..|.+..|+|++..|. +.-.+.+.+...+..+.+++.++|+...   +.|           ||.           
T Consensus        47 ~~~i~~E~~~~~iEl~t~p~~~~~~~~~~l~~~~~~l~~~~~~~g~~l~~~g~~P~~~~~~~~~~~~~rY~~~~~~~~~~  126 (372)
T 1r8g_A           47 AGEVKHDITESXLELATDVCRDINQAAGQFSAXQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYL  126 (372)
T ss_dssp             SSEEEECSSSSEEEEECCSBSSHHHHHHHHHHHHHHHHHHHHHTTCEEECCSBCSSCCC----------------CCGGG
T ss_pred             CCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCH
T ss_conf             88611037773699748787999999999999999999987651661243578978983213467607899999860528


Q ss_pred             -CCCCCCHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCC---------HHHHHHCCCCCCCE
Q ss_conf             -45686012011111146763122155565789999999999988641000006670---------01443188852120
Q gi|254780185|r  255 -ASHNGSGMYLNMSIHKGEKAIFTGNQHDRVSLKGLYYLGGIIKHAKSLNALTNAST---------NSYKRLLTDSQSPT  324 (458)
Q Consensus       255 -~~~~GsG~Hih~Sl~~~~~n~f~~~~~~~ls~~~~~fiaGil~h~~al~a~~~Ptv---------NSYkRl~p~~~ap~  324 (458)
                       ....-+|+|||+|+-+.              +..-.-+..+..+.|.+.||++.+.         -|||-..-+.+-..
T Consensus       127 ~~~~~~~g~hvn~~~~~~--------------~~~~~~~~~~~~~~p~l~aL~anSP~~~G~~tg~~S~R~~~~~~~~~~  192 (372)
T 1r8g_A          127 IQQATVFGQHVHVGCASG--------------DDAIYLLHGLSRFVPHFIALSAASPYXQGTDTRFASSRPNIFSAFPDN  192 (372)
T ss_dssp             GCSCCBCEEEEEEECSSH--------------HHHHHHHHHHHTTHHHHHHHHCCBCEETTEECSCSBCGGGGGTTSTTC
T ss_pred             HHHHHHCCCEEECCCCCH--------------HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf             877400152475588999--------------999999999999989999986389000599885431057887218676


Q ss_pred             EEEECCCCCCC------------EEE------CCCCCCCCCCEEEECCCCCCCCH--HHHHHHHHHHHHHHHHHC
Q ss_conf             10113688764------------010------25788765412440467532127--999999999999878855
Q gi|254780185|r  325 KLTYSTHNHSA------------SCR------IPYENKSDNKSIEIRFPDLSANP--YLAPAAILMAGLDGIAKK  379 (458)
Q Consensus       325 ~~~WG~~NR~a------------~iR------ip~~~~~~~~riE~R~~da~aNP--YL~lAailaAgl~Gi~~~  379 (458)
                      ...+-+++...            .+.      .+.-..+...+||+|+.|....+  +.+.++.+.+-+..+-..
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vr~~~~~~~iE~R~~D~~p~~~~~~~~~af~~~l~~~~~~~  267 (372)
T 1r8g_A          193 GPXPWVSNWQQFEALFRCLSYTTXIDSIKDLHWDIRPSPHFGTVEVRVXDTPLTLSHAVNXAGLIQATAHWLLTE  267 (372)
T ss_dssp             SSCCCCSSHHHHHHHHHHHTTSSSCSSGGGCCCSEEEETTTTEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHCCEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             887545663778999998752460113554122057776666453346789998899999999999999999871