HHsearch results for GI: 254780185 and protein with PDBid: 2j9i_A
>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}
Probab=100.00 E-value=0 Score=847.39 Aligned_cols=416 Identities=19% Similarity=0.250 Sum_probs=370.5
Q ss_pred CHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCHHCCCC-CCCCEEEEEECCCCEECCCC
Q ss_conf 98999999985798399999978998252378778783055884598456651002468-99888999641105877568
Q gi|254780185|r 4 KATSIIQKIAQEKVKFIDLRFTDLQGKFRHISMNVSLFNENTLLNGITFDSSSIDGWHS-KHPNLLLIPDIETMHMDPFY 82 (458)
Q Consensus 4 ~~~~i~~~l~~~~I~~V~~~~~Dl~G~~R~k~ip~~~f~~~~~~~G~~fd~s~i~g~~~-~~~D~~l~PD~~T~~~~Pw~ 82 (458)
++++|+++|++++|+||+++|+|++|++|||.||++.|.+.+..+|+.||++++.|+.. +++|++++||++|+.++||+
T Consensus 1 s~e~v~~~l~~~~I~~vr~~~~Dl~G~~Rgk~vp~~~~~~~~~~~g~~~dgs~~~g~~~~~~sD~~l~PD~~T~~~~~~~ 80 (421)
T 2j9i_A 1 SAEHVLTMLNEHAAAFVRFEATDAAGASRSKSIPAQFFEKVIHARGYLEDGEVNAGAAGAAASDIVLMPELSTAAVAAAA 80 (421)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEECSSSCEEEEEEEGGGCCTTHHHHCEEECGGGSTTTCCTTCCCEEEEECSSCCEECTTS
T ss_pred CHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
T ss_conf 98999999997899399999898999866899809999999756987157764267666888888999888976433334
Q ss_pred CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97227998520147544853025553235567998730345225773133089970677777865477666765457777
Q gi|254780185|r 83 AQSTVAFICNVYDPITLQPYNRDPRYTAQKAIDYLQTTDIGDTLLLGITTEFFVFDNVHCTISPIKSGFALESTEFLQNG 162 (458)
Q Consensus 83 ~~~~~~v~~d~~~~~~g~P~~~~PR~~Lk~~~~~l~~~~~G~~~~~g~E~EF~Lf~~~~~~~~p~~~~~~~~~~~~~~~~ 162 (458)
...+++|+|+ +|+|++.|||++||++++++++.+++..+.+|+|+|||+|+.......
T Consensus 81 ~~~~~~v~~~-----dG~p~~~~PR~iLkr~~~~l~~~G~~~~~~~~~E~Ef~l~~~~~~~~~----------------- 138 (421)
T 2j9i_A 81 AAATAAVICD-----GGAAAAASPRYIARAALAQLQAAGAAAGLLSAFIADFCIFGVPEVINS----------------- 138 (421)
T ss_dssp SSSEEEEEEE-----EESSCSCCHHHHHHHHHHHHHHTTSCSEECCEECCCCEEESCCEEEEC-----------------
T ss_pred CCCCEEEEEC-----CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCC-----------------
T ss_conf 4432179968-----999768698999999999875329873787504789886488866667-----------------
Q ss_pred CCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCC-CCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 775003655455635524446899999999998605411222133562121036555-6688877699999999999987
Q gi|254780185|r 163 NNKGYDSHAKSSYTLPPQDKLHDMRSEIVSALNNIGVQITKYHNQINDAQHSFGLQS-ESLLHASDNLQKYKYSVHQVAN 241 (458)
Q Consensus 163 ~~~g~~~~~~~~y~~~~~~~~~~~~~ei~~~l~~~Gi~ie~~h~E~gpGQ~Ei~~~~-~~~l~aAD~~~~~k~~ik~iA~ 241 (458)
..++|...+.+....+ .+++..++.+||+++++|+|+||||||+++.+ .++|+|||+++++|++||+||+
T Consensus 139 --------~~~~~~~~~~~~~~~~-~~~~~~l~~~gi~v~~~~~E~~pGQ~Ei~~~~~~~~l~aAD~~~~~K~~ik~iA~ 209 (421)
T 2j9i_A 139 --------KTISFPASTTAAAADQ-PQEAAAGGAAGAAAGAAGGAAAAGAAEICFLPEAAGAAAADNAFTLRTGLQEVAR 209 (421)
T ss_dssp --------SSCEEEECCCTTCTTG-GGSCCTTCCCSCCCBTTBCCCCCSSCCTTTTTTTCCSCTTTHHHHHHHHHHHHHH
T ss_pred --------CCCCCCCCCCCCHHHH-HHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf --------7877777753100128-9999988635788611356565543022057522133401089999999999999
Q ss_pred HCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHCCCCC
Q ss_conf 44975444121014568601201111114676312215556578999999999998864100000667001443188852
Q gi|254780185|r 242 SYCKIATFMPKPIASHNGSGMYLNMSIHKGEKAIFTGNQHDRVSLKGLYYLGGIIKHAKSLNALTNASTNSYKRLLTDSQ 321 (458)
Q Consensus 242 ~~G~~ATFmpKP~~~~~GsG~Hih~Sl~~~~~n~f~~~~~~~ls~~~~~fiaGil~h~~al~a~~~PtvNSYkRl~p~~~ 321 (458)
+||+.|||||||+.+.+|||||+|+|||++|+|+|.++++.+||+.++|||||||+|+++++++++||+|||||+.|++|
T Consensus 210 ~hG~~atFmpkP~~~~~Gsg~H~h~Sl~~~g~n~f~~~~~~~ls~~~~~~iaGll~~~~~~~~~~~p~~nsy~r~~~~~~ 289 (421)
T 2j9i_A 210 RYNAIASAAAAAAAAAAGAGSHSIWDVGAAGTNAFAGASGARATLTGAKWLAGLLAAAAAAAAAAAAAAAAAAAAAAGAA 289 (421)
T ss_dssp TTTCEEECCTTSSTTSCCCBCCEEECEEETTEESSCSSSGGGCCHHHHHHHHHHHHHHHHHHHHHTCSHHHHHHTSSSTT
T ss_pred HCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 85996433321111124234069984489997265799976533999986388762123221111111111111111111
Q ss_pred CCEEEEECCCCCCCEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCC
Q ss_conf 12010113688764010257887654124404675321279999999999998788559998665578877771320001
Q gi|254780185|r 322 SPTKLTYSTHNHSASCRIPYENKSDNKSIEIRFPDLSANPYLAPAAILMAGLDGIAKKIHPGKNIDELSLEEQNTIPRIC 401 (458)
Q Consensus 322 ap~~~~WG~~NR~a~iRip~~~~~~~~riE~R~~da~aNPYL~lAailaAgl~Gi~~~l~p~~~~~~~~~~~~~~~~~LP 401 (458)
||+++|||.+||+++||||..+.++++|||+|++|++|||||++||+|+|||+||+++++|++|..++.+.... ++||
T Consensus 290 ap~~~~WG~~nR~~~iRv~~~~~~~~~riE~R~~d~~aNPYL~lAa~l~Agl~Gi~~~~~~~~~~~~~~~~~~~--~~LP 367 (421)
T 2j9i_A 290 AAAATAWGAAAAACALNIAAAAAAKGAQIENKAGAAAANPYLVLAATVAAGLDGIQSAGAAAGAAAADAAAAAP--SEIP 367 (421)
T ss_dssp CCCEEEEESSCTTEEEEEECCSSGGGCEEEECSCBTTSCHHHHHHHHHHHHHHHHHHTCCCCSCBCSSSSCSSC--CCCC
T ss_pred CCCCEEECCCCCEEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH--HHCC
T ss_conf 10130424766617999840357877568834899887989999999999999987089998976777455673--2318
Q ss_pred CCHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
Q ss_conf 79899999987398989841337889999999999999999965999789986357
Q gi|254780185|r 402 ISLRESLENLDKDREFLKVGNVFDDDQIDAFINLKMKEVLKLESSPSPVEFEMYCS 457 (458)
Q Consensus 402 ~~L~eAl~~l~~d~~~~~~~~~lG~~~v~~~~~~K~~E~~~~~~~vt~wE~~~Y~~ 457 (458)
+||+|||++|++|+++ ++++||++|++.|+++||+||++| +|+||+++||+
T Consensus 368 ~tL~eAl~~l~~d~~~--l~~~lg~~~~~~~~~~K~~E~~~~---~t~~e~~ey~~ 418 (421)
T 2j9i_A 368 GKMEDALAALEQDAEC--LKAGLGEAFIRAAVAAAKYELENE---ETDAEGNKFLE 418 (421)
T ss_dssp SSHHHHHHHHTTCCSS--SSCSCCCHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCHHH--HHHHCCHHHHHHHHHHHHHHHHHH---CCCHHHHHHHH
T ss_conf 8999999999858599--998768999999999999999996---58257999988