HHsearch results for GI: 254780185 and protein with PDBid: 3fky_A
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae}
Probab=100.00 E-value=0 Score=592.55 Aligned_cols=353 Identities=19% Similarity=0.234 Sum_probs=278.7
Q ss_pred CHHHHHHHHHHC-CCCE-EEEEEECCCCCEEEEEEEHHHHHHHHH-HCCCCCCCCCHHCCCCCCCCEEEEEECCCCEECC
Q ss_conf 989999999857-9839-999997899825237877878305588-4598456651002468998889996411058775
Q gi|254780185|r 4 KATSIIQKIAQE-KVKF-IDLRFTDLQGKFRHISMNVSLFNENTL-LNGITFDSSSIDGWHSKHPNLLLIPDIETMHMDP 80 (458)
Q Consensus 4 ~~~~i~~~l~~~-~I~~-V~~~~~Dl~G~~R~k~ip~~~f~~~~~-~~G~~fd~s~i~g~~~~~~D~~l~PD~~T~~~~P 80 (458)
+..-+.++++-+ ..|+ +..+|+|.+|.+|||+........+.- ..-++|||||+.++...++|++|+|| |++++|
T Consensus 8 ~~~~~~~~~~~~~~~k~~~eYiWid~~~~~RsK~k~~~~~~~~~~~~p~w~FDGSSt~qa~~~~SD~~L~P~--~~~~dP 85 (370)
T 3fky_A 8 KTQILQKYLELDQRGRIIAEYVWIDGTGNLRSKGRTLKKRITSIDQLPEWNFDGSSTNQAPGHDSDIYLKPV--AYYPDP 85 (370)
T ss_dssp -------------CCCEEEEEEEECSSSCEEEEEEEESSCCCSGGGSCCEEECGGGTTSSCCCC--EEEEEE--EEEECT
T ss_pred HHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEECCCCCCCHHHCCCEECCCCCCCCEECCCCEEEEECC--EEECCC
T ss_conf 578999985788678079999998898888765167357889976698352257766860468853999617--140589
Q ss_pred CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 68972279985201475448530255532355679987303452257731330899706777778654776667654577
Q gi|254780185|r 81 FYAQSTVAFICNVYDPITLQPYNRDPRYTAQKAIDYLQTTDIGDTLLLGITTEFFVFDNVHCTISPIKSGFALESTEFLQ 160 (458)
Q Consensus 81 w~~~~~~~v~~d~~~~~~g~P~~~~PR~~Lk~~~~~l~~~~~G~~~~~g~E~EF~Lf~~~~~~~~p~~~~~~~~~~~~~~ 160 (458)
|...+++.|+||++++ +|+|++.|||++|+++++++++. | +++|+|+|||+|+..........
T Consensus 86 f~~~~t~lvlCdv~~~-DG~P~~~~pR~~Lkk~~~~~~~~--g--~~~g~E~Ef~~f~~~~~~~~~~~------------ 148 (370)
T 3fky_A 86 FRRGDNIVVLAACYNN-DGTPNKFNHRHEAAKLFAAHKDE--E--IWFGLEQEYTLFDMYDDVYGWPK------------ 148 (370)
T ss_dssp TTCTTCEEEEEEEECT-TSSBCTTCCHHHHHHHHHHTGGG--C--CEEEEEEEEEEECTTSSBTTCCT------------
T ss_pred CCCCCCEEEEEEEECC-CCCCCCCCCHHHHHHHHHHHHHC--C--CEEEEEEEEEEEEECCCCCCCCC------------
T ss_conf 9899988999999889-99998878699999999888756--8--47812104899970367556877------------
Q ss_pred CCCCCEECCCCCCCCCCCHHH--HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 777750036554556355244--468999999999986054112221335621210365556688877699999999999
Q gi|254780185|r 161 NGNNKGYDSHAKSSYTLPPQD--KLHDMRSEIVSALNNIGVQITKYHNQINDAQHSFGLQSESLLHASDNLQKYKYSVHQ 238 (458)
Q Consensus 161 ~~~~~g~~~~~~~~y~~~~~~--~~~~~~~ei~~~l~~~Gi~ie~~h~E~gpGQ~Ei~~~~~~~l~aAD~~~~~k~~ik~ 238 (458)
.++......+|.....+ ...++++++++.|..+||+++++|+|+|||||||++.|.++|+|||+++++|++||+
T Consensus 149 ----~~~~~~~g~y~~~~~~~~~~~~d~~~~~~~~l~~~gi~ie~~~~E~~pGQ~Ei~~~~~~~l~aAD~~~~~K~ivk~ 224 (370)
T 3fky_A 149 ----GGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHR 224 (370)
T ss_dssp ----TSBCSCSSSCTTCCSTTTCSCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCHHHCCHHHHHHHHHHHH
T ss_conf ----8878888875656787502468999999999986697068874366788468720213022112689999999999
Q ss_pred HHHHCCCEEEEEEEECCC-CCCCHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHC
Q ss_conf 987449754441210145-6860120111111467631221555657899999999999886410000066700144318
Q gi|254780185|r 239 VANSYCKIATFMPKPIAS-HNGSGMYLNMSIHKGEKAIFTGNQHDRVSLKGLYYLGGIIKHAKSLNALTNASTNSYKRLL 317 (458)
Q Consensus 239 iA~~~G~~ATFmpKP~~~-~~GsG~Hih~Sl~~~~~n~f~~~~~~~ls~~~~~fiaGil~h~~al~a~~~PtvNSYkRl~ 317 (458)
||.+||++|||||||+.+ .+|||||+|+|+|+.++ +.+.+.....+.++++.|+. ++++||+||||||+
T Consensus 225 iA~~~G~~aTFmPKP~~gd~~GsG~H~h~S~~~~~~-------~~g~~~~~~~~~~~~~~~~~---~~~~~~~nsy~Rl~ 294 (370)
T 3fky_A 225 VAEEFGIKISFHPKPLKGDWNGAGCHANVSTKEMRQ-------PGGTKYIEQAIEKLSKRHAE---HIKLYGSDNDMRLT 294 (370)
T ss_dssp HHHTTTCEEECCSCSSSSSSCCCBEEEEEECHHHHS-------SSTHHHHHHHHHHHHHTHHH---HHHSSCTTGGGC--
T ss_pred HHHHHCCCEEEECCCCCCCCCCCCEEEEECCCCCCC-------CCCHHHHHHHHHHHHHHHHH---HHCCCCCCCHHHCC
T ss_conf 999969818983344678767885046543343668-------88579999999988888887---63336753022214
Q ss_pred CCCCCCEEE--EECCCCCCCEEECCCCC-CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 885212010--11368876401025788-76541244046753212799999999999987885599986655788
Q gi|254780185|r 318 TDSQSPTKL--TYSTHNHSASCRIPYEN-KSDNKSIEIRFPDLSANPYLAPAAILMAGLDGIAKKIHPGKNIDELS 390 (458)
Q Consensus 318 p~~~ap~~~--~WG~~NR~a~iRip~~~-~~~~~riE~R~~da~aNPYL~lAailaAgl~Gi~~~l~p~~~~~~~~ 390 (458)
|++|||+.. |||.+||+|+||||... +++++|||+|+||++|||||++||+|+|||+||+++ +|++|++.++
T Consensus 295 ~~~eap~~~~~swG~~NR~a~iRIP~~~~~~~~~r~E~R~pd~~aNPYl~~aa~l~agl~Gi~~~-~p~~p~~~~~ 369 (370)
T 3fky_A 295 GRHETASMTAFSSGVANRGSSIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDNA-DMTKEFERES 369 (370)
T ss_dssp ------CCSCCCEEESCTTSSEEECHHHHHHTCCCEEECCCBTTCCHHHHHHHHHHHHHCCBTTB-CTTTCCC---
T ss_pred CCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC-CCCCCCCCCC
T ss_conf 77647664123554678746799687778888618997577778688999999999998787548-9998567778