HHsearch alignment for GI: 254780186 and conserved domain: PRK11240
>PRK11240 penicillin-binding protein 1C; Provisional.
Probab=92.93 E-value=0.66 Score=26.71 Aligned_cols=102 Identities=15% Similarity=0.169 Sum_probs=69.1
Q ss_pred HHHCCHHHHHHHHHHHHCCCC---------CCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCE--
Q ss_conf 000079999999999825970---------777887551899997755445411331256678987078715652211--
Q gi|254780186|r 195 SLMMNCVQLAKSGLYLAFRGY---------NSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFPGKSGVGGG-- 263 (311)
Q Consensus 195 si~~t~~dLA~~~a~LAn~G~---------~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlPaKSGVgGg-- 263 (311)
T Consensus 440 g~evtl~eLa~aYa~~An~G~~~~~~~~~~~~~~~~~v~s~~aa~~~~~iL~~~~r~~~~~~l~~~~pvAgKTGTS~g~R 519 (770)
T PRK11240 440 GAGARLEDMAAAYSAFARHGKAAKLRLQPDDPLLERPLMSPGAAWIIRRIMADEAQPLPDAALPRVVPLAWKTGTSYGYR 519 (770)
T ss_pred CCCCCHHHHHHHHHHHHCCCEECCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEECCCCCCCCC
T ss_conf 76888999999999997798433517715886332136888889999999875044430110023776244346788873
Q ss_pred ---EEEEECCCCEEEEEC------CCCCCCCCCHHHHHHHHHH
Q ss_conf ---033437851799875------3207789848999999999
Q gi|254780186|r 264 ---ILAIVPSKASIAVWS------PGLDNSGNSLLGAKALELL 297 (311)
Q Consensus 264 ---ilavvPg~~gIav~S------P~LD~~GNSv~G~~~le~l 297 (311)
T Consensus 520 DaWfvG~-tp~ytvgVWvGn~Dg~p~~~~~G~~~AaPllf~i~ 561 (770)
T PRK11240 520 DAWAIGV-NARYVIGIWTGRPDGTPVVGQFGFASAVPLLNQVN 561 (770)
T ss_pred CEEEEEE-CCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 3389863-59859999986899993877406023587999999