HHsearch alignment of GI: 254780186 and MMDB domain: 1k38_A_
>1k38_A (A:) Penicillinase, beta-lactamase OXA-2; serine beta-lactamase, hydrolase, antibiotic resistance, carbamylated lysine; HET: KCX; 1.50A {Salmonella typhimurium}
Probab=93.80 E-value=0.12 Score=31.17 Aligned_cols=208 Identities=13% Similarity=-0.044 Sum_probs=112.5
Q ss_pred EEEEEEC-CCCEE-EECC---CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHH
Q ss_conf 2899808-99788-7668---78640199999999999999611289999946576567720444201148984763111
Q gi|254780186|r 39 GMSLALE-DGTVY-SVGE---SEFLFSIQSISKVFLLTIALRKFDEEIWKRVGREPSGSSFDSIVQLENENGIPRNPFVN 113 (311)
Q Consensus 39 giai~t~-dG~~~-~~GD---~~~~FsiqSisK~f~l~~al~~~G~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiN 113 (311)
++.+... +|++. -+|+ +...|+.-|+-|||+++.||+..- -+...-|+.--.......+.+.++-=
T Consensus 22 ~~v~~~~~tg~i~a~~~~~n~a~~~~~pGStfKp~~~aaAl~~g~---------~~~~~~~~~~~~~~~~~~~~~g~itl 92 (254)
T 1k38_A 22 TIVVADERQADRAMLVFDPVRSKKRYSPASTFXIPHTLFALDAGA---------VRDEFQIFRWDGVNRGFAGHNQDQDL 92 (254)
T ss_dssp EEEEEECSSSSCCCEEESHHHHTCCBCCGGGGHHHHHHHHHHHTS---------CCSTTCCBCCCSCCCSCTTTSSCBCH
T ss_pred EEEEEECCCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHCCC---------CCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 999998999977887319888668779971899999999998699---------66774034799866478888998499
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 37999998644888889999999999998728998624789999851124127999999982788889989999999987
Q gi|254780186|r 114 AGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDVLKFYFHQ 193 (311)
Q Consensus 114 AGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~~ 193 (311)
..|+.-++= -.| .+..+++ |.+ .+..+++.+|.-.....+......-+
T Consensus 93 ~~Al~~S~N--------~~~---~~l~~~l-G~~--------------------~~~~~~~~~G~~~~~~~~~~~~~~~~ 140 (254)
T 1k38_A 93 RSAMRNSTV--------WVY---ELFAKEI-GDD--------------------KARRYLKKIDYGNADPSTSNGDYWIE 140 (254)
T ss_dssp HHHHHTTCH--------HHH---HHHHHHH-CHH--------------------HHHHHHHHTTCTTCCCCC--CCTTTT
T ss_pred HHHHHHCCH--------HHH---HHHHHHC-CHH--------------------HHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 999997496--------999---9999973-928--------------------89999997799999888775541027
Q ss_pred HHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC---EEEEEECC
Q ss_conf 300007999999999982597077788755189999775544541133125667898707871565221---10334378
Q gi|254780186|r 194 CSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFPGKSGVGG---GILAIVPS 270 (311)
Q Consensus 194 Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlPaKSGVgG---gilavvPg 270 (311)
=++.+|..+||.+.+++||+|+ .+++..++.+...|-.- .++ ...+-+|+|.+- -.++-.|.
T Consensus 141 g~~~~tp~~ma~~~~~ian~G~-------~~~p~~v~~i~d~~~~~-~~~-------~~~~~gktGTa~~~~wf~G~~p~ 205 (254)
T 1k38_A 141 GSLAISAQEQIAFLRKLYRNEL-------PFRVEHQRLVKDLMIVE-AGR-------NWILRAKTGWEGRMGWWVGWVEW 205 (254)
T ss_dssp SSCCBCHHHHHHHHHHHHTTCS-------SSCHHHHHHHHHHTEEE-EET-------TEEEEEEEEESSSEEEEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHCCCC-------CCCHHHHHHHHHHHHHH-HHC-------CCCCCCEECCCCCCEEEEEEEEC
T ss_conf 8753669999999999985992-------27867999999999886-625-------87775620268875689999977
Q ss_pred ---CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf ---51799875320778984899999999999948
Q gi|254780186|r 271 ---KASIAVWSPGLDNSGNSLLGAKALELLAIRTG 302 (311)
Q Consensus 271 ---~~gIav~SP~LD~~GNSv~G~~~le~ls~~l~ 302 (311)
+.-+++|-..=+..-.+.....+.+.+-+.+.
T Consensus 206 ~~~~~~~~v~v~~~~~~~g~~~a~~i~~~il~~l~ 240 (254)
T 1k38_A 206 PTGSVFFALNIDTPNRMDDLFKREAIVRAILRSIE 240 (254)
T ss_dssp TTEEEEEEEEEECTTGGGGTHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 99869999999779986627899999999999758