HHsearch alignment of GI: 254780186 and MMDB domain: 3equ_A_259-445

>3equ_A (A:259-445) PBP-2, penicillin-binding protein 2; class B transpeptidase, cell division, cell inner membrane, cell membrane, cell shape; HET: SEP; 2.40A {Neisseria gonorrhoeae} PDB: 3eqv_A*
Probab=94.25  E-value=0.064  Score=32.87  Aligned_cols=150  Identities=14%  Similarity=0.042  Sum_probs=83.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCC---HHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHH------HHHCCCC
Q ss_conf             6401999999999999996112---899999465765677204442011489847631113799999------8644888
Q gi|254780186|r   57 FLFSIQSISKVFLLTIALRKFD---EEIWKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVS------DAVLGSS  127 (311)
Q Consensus        57 ~~FsiqSisK~f~l~~al~~~G---~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~------sli~~~~  127 (311)
                      ..|+--|+-|||+++.|||..-   +.++..-+..+.+.        .......+.+.-=..|+..+      .+.. +.
T Consensus         7 ~~~~PGSTfKp~t~~aaLe~G~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~l~~al~~S~N~~f~~l~~-~~   77 (187)
T 3equ_A            7 DXIEPGSAIKPFVIAKALDAGKTDLNERLNTQPYKIGPS--------PVRDTHVYPSLDVRGIXQKSSNVGTSKLSA-RF   77 (187)
T ss_dssp             CCBCCGGGGHHHHHHHHHHHTSSCTTCEEECCCEEETTE--------EECCSSCCSEEEHHHHHHHTCHHHHHHHHT-TS
T ss_pred             CCCCCCCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCC--------CCCCCCCCCCCCHHHHHHHCCCCCCHHHHH-HC
T ss_conf             553665433521111001258743220110112222211--------122346767322999866056630013234-32


Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH----HHHHHCCHHHH
Q ss_conf             88999999999999872899862478999985112412799999998278888998999999998----73000079999
Q gi|254780186|r  128 SADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDVLKFYFH----QCSLMMNCVQL  203 (311)
Q Consensus       128 ~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~----~Csi~~t~~dL  203 (311)
                      ..    +++.+.++++--+.++.++..-                   +..-+..++....+.+..    +=++.+|.-+|
T Consensus        78 g~----~~~~~~~~~~G~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~g~~~~~tpl~l  134 (187)
T 3equ_A           78 GA----EEXYDFYHELGIGVRXHSGFPG-------------------ETAGLLRNWRRWRPIEQATXSFGYGLQLSLLQL  134 (187)
T ss_dssp             CH----HHHHHHHHHTTTTSCCCCSCTT-------------------CCCCBCCCGGGCCHHHHHHHHTTCSCBBCHHHH
T ss_pred             CC----HHHHHHHHHCCCCCCCCCCCCC-------------------CCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHH
T ss_conf             82----7789999874964236889986-------------------311255552235630012212577756788999


Q ss_pred             HHHHHHHHCCCCCC----------CCCCEECCHHHHHHHHHHHHH
Q ss_conf             99999982597077----------788755189999775544541
Q gi|254780186|r  204 AKSGLYLAFRGYNS----------LTNQSVISPLQSRCVNAVMLT  238 (311)
Q Consensus       204 A~~~a~LAn~G~~P----------~t~~~vi~~~~~~~v~s~M~T  238 (311)
                      |.+.+++||+|+-.          ..++|+++++++..++.+|..
T Consensus       135 a~~~atiAn~G~~~~p~~i~~v~~~~g~~v~s~~~a~~l~~~l~~  179 (187)
T 3equ_A          135 ARAYTALTHDGVLLPLSFEKQAVAPQGKRIFKEXTAREVRNLXVS  179 (187)
T ss_dssp             HHHHHHHHTTTEECCCBSBCCSSCCCCEECSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             765520024770333101001457767523347789999989985