HHsearch alignment of GI: 254780186 and MMDB domain: 3equ_A_259-445
>3equ_A (A:259-445) PBP-2, penicillin-binding protein 2; class B transpeptidase, cell division, cell inner membrane, cell membrane, cell shape; HET: SEP; 2.40A {Neisseria gonorrhoeae} PDB: 3eqv_A*
Probab=94.25 E-value=0.064 Score=32.87 Aligned_cols=150 Identities=14% Similarity=0.042 Sum_probs=83.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHCC---HHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHH------HHHCCCC
Q ss_conf 6401999999999999996112---899999465765677204442011489847631113799999------8644888
Q gi|254780186|r 57 FLFSIQSISKVFLLTIALRKFD---EEIWKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVS------DAVLGSS 127 (311)
Q Consensus 57 ~~FsiqSisK~f~l~~al~~~G---~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~------sli~~~~ 127 (311)
..|+--|+-|||+++.|||..- +.++..-+..+.+. .......+.+.-=..|+..+ .+.. +.
T Consensus 7 ~~~~PGSTfKp~t~~aaLe~G~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~l~~al~~S~N~~f~~l~~-~~ 77 (187)
T 3equ_A 7 DXIEPGSAIKPFVIAKALDAGKTDLNERLNTQPYKIGPS--------PVRDTHVYPSLDVRGIXQKSSNVGTSKLSA-RF 77 (187)
T ss_dssp CCBCCGGGGHHHHHHHHHHHTSSCTTCEEECCCEEETTE--------EECCSSCCSEEEHHHHHHHTCHHHHHHHHT-TS
T ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCC--------CCCCCCCCCCCCHHHHHHHCCCCCCHHHHH-HC
T ss_conf 553665433521111001258743220110112222211--------122346767322999866056630013234-32
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH----HHHHHCCHHHH
Q ss_conf 88999999999999872899862478999985112412799999998278888998999999998----73000079999
Q gi|254780186|r 128 SADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDVLKFYFH----QCSLMMNCVQL 203 (311)
Q Consensus 128 ~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~----~Csi~~t~~dL 203 (311)
.. +++.+.++++--+.++.++..- +..-+..++....+.+.. +=++.+|.-+|
T Consensus 78 g~----~~~~~~~~~~G~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~g~~~~~tpl~l 134 (187)
T 3equ_A 78 GA----EEXYDFYHELGIGVRXHSGFPG-------------------ETAGLLRNWRRWRPIEQATXSFGYGLQLSLLQL 134 (187)
T ss_dssp CH----HHHHHHHHHTTTTSCCCCSCTT-------------------CCCCBCCCGGGCCHHHHHHHHTTCSCBBCHHHH
T ss_pred CC----HHHHHHHHHCCCCCCCCCCCCC-------------------CCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHH
T ss_conf 82----7789999874964236889986-------------------311255552235630012212577756788999
Q ss_pred HHHHHHHHCCCCCC----------CCCCEECCHHHHHHHHHHHHH
Q ss_conf 99999982597077----------788755189999775544541
Q gi|254780186|r 204 AKSGLYLAFRGYNS----------LTNQSVISPLQSRCVNAVMLT 238 (311)
Q Consensus 204 A~~~a~LAn~G~~P----------~t~~~vi~~~~~~~v~s~M~T 238 (311)
|.+.+++||+|+-. ..++|+++++++..++.+|..
T Consensus 135 a~~~atiAn~G~~~~p~~i~~v~~~~g~~v~s~~~a~~l~~~l~~ 179 (187)
T 3equ_A 135 ARAYTALTHDGVLLPLSFEKQAVAPQGKRIFKEXTAREVRNLXVS 179 (187)
T ss_dssp HHHHHHHHTTTEECCCBSBCCSSCCCCEECSCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 765520024770333101001457767523347789999989985