HHsearch alignment of GI: 254780186 and MMDB domain: 3fwm_A_46-56_146-155_343-702
>3fwm_A (A:46-56,A:146-155,A:343-702) Penicillin-binding protein 1B; bacterial cell WALL synthesis, antibiotics design, transferase, hydrolase; HET: M0E; 2.16A {Escherichia coli} PDB: 3fwl_A*
Probab=95.96 E-value=0.048 Score=33.66 Aligned_cols=227 Identities=14% Similarity=0.064 Sum_probs=120.1
Q ss_pred HCEEEEEE-CCCCEEEEC---CC---------CCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHCCCCCCCC------CHH
Q ss_conf 70289980-899788766---87---------86401999999999999996112-899999465765677------204
Q gi|254780186|r 37 HFGMSLAL-EDGTVYSVG---ES---------EFLFSIQSISKVFLLTIALRKFD-EEIWKRVGREPSGSS------FDS 96 (311)
Q Consensus 37 ~fgiai~t-~dG~~~~~G---D~---------~~~FsiqSisK~f~l~~al~~~G-~~V~~~VG~ePSg~~------FNS 96 (311)
+-++.+.+ ..|++...- |. +..++.-|+-|||+++.||++.. -....++...|.... ++.
T Consensus 97 ~~a~vv~d~~TGeIlA~~g~~d~~~~~~n~a~~~~~~pGStfKp~~~aaal~~g~~~~~~~~~~d~p~~~~~~~~~~~~~ 176 (381)
T 3fwm_A 97 ETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGQVWSP 176 (381)
T ss_dssp EEEEEEEETTTCBEEEEECSSSCSSCSSCHHHHCCEECGGGGHHHHHHHHHTCTTTCCTTCEEECSCCCEECSSSCEECC
T ss_pred CCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCEEECCCCCCCCC
T ss_conf 42279886599988999614413445655111342343321103567888863875335427427771686699853477
Q ss_pred HHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHC
Q ss_conf 44201148984763111379999986448888899999999999987289986247899998511241279999999827
Q gi|254780186|r 97 IVQLENENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSY 176 (311)
Q Consensus 97 i~~Le~~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~ 176 (311)
...+...+.+.++-=..||+-++ .-.|-++ ..++ | ...+..+++.+
T Consensus 177 --~~~~~~~~~~G~itl~~al~~S~--------N~~~~~l---~~~l-g--------------------~~~~~~~~~~~ 222 (381)
T 3fwm_A 177 --QNDDRRYSESGRVMLVDALTRSM--------NVPTVNL---GMAL-G--------------------LPAVTETWIKL 222 (381)
T ss_dssp --CCTTSCCCTTSEEEHHHHHHTTC--------HHHHHHH---HHHH-C--------------------HHHHHHHHHHH
T ss_pred --CCCCCCCCCCCCEEHHHHHHCCC--------CEEEEEE---ECCC-C--------------------HHHHHHHHHHH
T ss_conf --66665446765232665542245--------2158873---2002-3--------------------02589999971
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC--------------------CCCCCEECCHHHHHHHHHHH
Q ss_conf 8888998999999998730000799999999998259707--------------------77887551899997755445
Q gi|254780186|r 177 GNIRYKIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYN--------------------SLTNQSVISPLQSRCVNAVM 236 (311)
Q Consensus 177 g~~~~dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~--------------------P~t~~~vi~~~~~~~v~s~M 236 (311)
|.-..+..... -.-+=.+.+|..+||.+.+++||+|+- ....+|+++++.+..+..+|
T Consensus 223 G~~~~~~~~~~--~~~~G~~~vtplqla~aya~iaN~G~~~~P~~i~~v~d~~G~~~~~~~~~~~~v~~~~~a~~~~~~l 300 (381)
T 3fwm_A 223 GVPKDQLHPVP--AMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTM 300 (381)
T ss_dssp TCCGGGCCCSG--GGGGTCCEECHHHHHHHHHHHHTTSEECCCBSEEEEECTTSCEEEECCCCCEECSCHHHHHHHHHHH
T ss_pred CCCCCCCCCCC--HHHCCCCCCCHHHHHHHHHHHHCCCEEECCEEEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 98854567881--5423888898889988998873498772678777798899988614799776167999999999999
Q ss_pred HHCCCCHHHHHHHHHH-C--CCCCCCCCCE----EEEEECCCCEEEEECCCC-----CCCCCCHHHHHHHHHHHH
Q ss_conf 4113312566789870-7--8715652211----033437851799875320-----778984899999999999
Q gi|254780186|r 237 LTCGHYDHSGDFAYRV-G--FPGKSGVGGG----ILAIVPSKASIAVWSPGL-----DNSGNSLLGAKALELLAI 299 (311)
Q Consensus 237 ~TcGmYd~SG~fa~~V-G--lPaKSGVgGg----ilavvPg~~gIav~SP~L-----D~~GNSv~G~~~le~ls~ 299 (311)
..---......+..++ | +=+|+|-+-+ -..---.++.++||-.-- ...|-+.++-.+-+.+.+
T Consensus 301 ~~vv~~Gt~~~~~~~~~~~~vaGKTGTs~~~~d~Wf~g~~p~~~~av~vg~d~~~~~~~~g~~~A~pi~~~im~~ 375 (381)
T 3fwm_A 301 QQVVQRGTGRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPTKLYGASGAMSIYQRYLAN 375 (381)
T ss_dssp HHHHHTSTTHHHHHHSGGGCCEEEEEECGGGSEEEEEEECSSEEEEEEEECTTCCCCCCCTTHHHHHHHHHHHHS
T ss_pred HHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 988655674120024999869998963789716999973799699999976799978782669999999999960