Query gi|254780186|ref|YP_003064599.1| glutaminase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 311
No_of_seqs 127 out of 540
Neff 5.0
Searched_HMMs 33803
Date Mon May 23 06:41:07 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780186.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >3czd_A Glutaminase kidney iso 100.0 0 0 879.4 28.8 305 1-308 7-314 (315)
2 >1u60_A Probable glutaminase Y 100.0 0 0 389.6 13.5 141 57-199 1-142 (142)
3 >2pby_A Glutaminase; secsg, ri 100.0 0 0 352.8 17.1 174 1-306 3-176 (176)
4 >2pby_A Glutaminase; secsg, ri 100.0 0 0 353.5 13.7 131 64-195 1-132 (132)
5 >3ih8_A Salt-tolerant glutamin 100.0 0 0 341.3 16.8 176 2-308 4-179 (179)
6 >1mki_A Probable glutaminase Y 100.0 0 0 342.4 13.7 130 64-195 1-132 (132)
7 >3ih8_A Salt-tolerant glutamin 100.0 0 0 332.1 13.8 128 65-194 1-130 (130)
8 >1mki_A Probable glutaminase Y 100.0 0 0 322.4 16.8 174 1-306 15-198 (198)
9 >1u60_A Probable glutaminase Y 100.0 2.8E-45 0 315.2 16.4 163 2-308 6-168 (168)
10 >1vqq_A Saupbp2A, penicillin-b 96.5 0.0004 1.2E-08 47.2 -0.3 164 55-238 4-186 (195)
11 >3g4p_A Beta-lactamase OXA-24; 96.1 0.024 7.2E-07 35.6 6.9 230 2-301 2-241 (244)
12 >3fwm_A Penicillin-binding pro 96.0 0.048 1.4E-06 33.7 7.9 227 37-299 97-375 (381)
13 >3hbr_A OXA-48; class D beta-l 95.3 0.023 6.9E-07 35.7 4.2 207 36-298 40-259 (265)
14 >1k55_A Beta lactamase OXA-10; 95.2 0.018 5.3E-07 36.5 3.3 220 33-303 14-244 (246)
15 >2v2f_F Penicillin binding pro 95.1 0.15 4.4E-06 30.5 8.0 108 193-301 210-363 (390)
16 >3equ_A PBP-2, penicillin-bind 94.3 0.064 1.9E-06 32.9 4.3 150 57-238 7-179 (187)
17 >1k38_A Penicillinase, beta-la 93.8 0.12 3.5E-06 31.2 4.9 208 39-302 22-240 (254)
18 >3isg_A Penicillinase, beta-la 93.3 0.37 1.1E-05 27.9 6.7 218 36-300 15-245 (251)
19 >1w5d_A Penicillin-binding pro 90.8 0.082 2.4E-06 32.2 1.0 52 33-84 21-73 (241)
20 >1nrf_A Regulatory protein BLA 88.5 0.61 1.8E-05 26.5 4.0 130 57-235 4-133 (134)
21 >2iwb_A Methicillin resistance 88.3 0.12 3.5E-06 31.1 0.3 210 33-300 19-242 (246)
22 >1bue_A Protein (imipenem-hydr 84.8 0.37 1.1E-05 27.9 1.3 169 34-240 15-190 (265)
23 >1n9b_A Penicillinase, beta-la 84.3 0.46 1.4E-05 27.3 1.6 43 36-78 17-60 (265)
24 >2wk0_A Beta-lactamase; hydrol 82.9 0.59 1.7E-05 26.6 1.7 227 33-302 14-261 (265)
25 >1alq_A CP254 beta-lactamase; 82.4 0.64 1.9E-05 26.4 1.7 57 21-78 43-100 (266)
26 >3dw0_A Class A carbapenemase 82.3 0.65 1.9E-05 26.3 1.7 65 30-95 36-104 (294)
27 >2qmi_A PBP related beta-lacta 81.4 2.9 8.5E-05 22.1 4.7 83 194-282 235-331 (351)
28 >1o7e_A L2 beta lactamase; hyd 81.1 0.63 1.9E-05 26.4 1.3 227 27-300 20-270 (276)
29 >2bcf_A Probable D-alanyl-D-al 79.9 2 5.9E-05 23.1 3.5 215 30-292 10-248 (276)
30 >1m40_A TEM-1, beta-lactamase 78.8 0.96 2.8E-05 25.2 1.6 62 36-97 17-82 (263)
31 >2wzx_A Beta-lactamase; inhibi 78.3 3.3 9.9E-05 21.7 4.2 110 187-301 216-361 (371)
32 >3c5a_A Class A carbapenemase 78.2 0.75 2.2E-05 25.9 0.9 54 24-78 5-59 (264)
33 >3i7j_A Beta-lactamase MB2281C 77.7 2.4 7.1E-05 22.6 3.4 42 37-78 12-55 (280)
34 >3cg5_A Beta-lactamase, penici 77.7 0.82 2.4E-05 25.7 1.0 211 35-278 14-237 (265)
35 >2cc1_A Beta-lactamase, penici 77.2 1.1 3.4E-05 24.7 1.6 43 35-78 15-58 (262)
36 >1xkz_A Regulatory protein BLA 77.1 1.6 4.7E-05 23.8 2.3 206 34-299 27-248 (255)
37 >1hzo_A Beta-lactamase; mixed 75.9 1.1 3.1E-05 24.9 1.1 58 35-93 18-79 (271)
38 >2ffy_A Beta-lactamase; AMPC, 75.1 2.7 8E-05 22.3 3.0 46 188-235 212-257 (358)
39 >3lez_A Beta-lactamase; antibi 73.6 1.2 3.6E-05 24.6 1.0 201 35-277 13-230 (260)
40 >2dcf_A 6-aminohexanoate-dimer 73.5 3.1 9.1E-05 21.9 3.0 261 37-301 33-340 (343)
41 >1bsg_A Beta lactamase, penici 73.5 1.2 3.5E-05 24.6 0.9 42 36-78 16-58 (266)
42 >1w7f_A Beta-lactamase; hydrol 73.0 1.9 5.7E-05 23.3 1.9 49 29-78 52-101 (307)
43 >2qpn_A Beta-lactamase GES-1; 72.4 1.4 4.2E-05 24.2 1.1 43 35-78 36-79 (287)
44 >2p74_A Beta-lactamase CTX-M-9 70.2 1.8 5.2E-05 23.5 1.1 55 36-91 18-76 (263)
45 >2qz6_A Beta-lactamase; psychr 69.0 8.7 0.00026 19.0 4.9 103 194-301 218-356 (358)
46 >1g6a_A Beta-lactamase PSE-4; 68.6 4.7 0.00014 20.7 3.1 42 36-78 21-63 (271)
47 >2bg1_A PBP1B, penicillin-bind 68.4 8.9 0.00026 18.9 10.7 128 169-299 167-335 (347)
48 >1ei5_A D-aminopeptidase, DAP; 65.5 1.6 4.9E-05 23.7 0.2 75 192-278 156-244 (270)
49 >2jch_A Penicillin-binding pro 64.7 0.44 1.3E-05 27.4 -2.8 68 169-238 136-223 (316)
50 >1ci9_A ESTB, protein (carboxy 60.8 6.9 0.0002 19.6 2.7 85 192-278 239-336 (342)
51 >2wad_A Penicillin-binding pro 52.6 2.9 8.6E-05 22.1 -0.3 98 199-304 212-327 (330)
52 >1zkj_A CMY-10, extended-spect 48.9 13 0.00038 17.9 2.5 108 188-300 217-356 (359)
53 >1msw_D DNA-directed RNA polym 45.8 21 0.00063 16.5 3.3 63 4-68 16-79 (181)
54 >2do9_A NALP10, nacht-, LRR- a 44.3 23 0.00067 16.3 5.0 67 68-143 18-84 (115)
55 >1z6f_A Penicillin-binding pro 41.9 9.8 0.00029 18.7 1.0 24 55-78 1-24 (145)
56 >1pn5_A Nacht-, LRR- and PYD-c 39.3 18 0.00053 17.0 2.0 89 45-143 39-135 (159)
57 >1qme_A Penicillin-binding pro 35.1 16 0.00048 17.3 1.2 24 193-216 210-234 (263)
58 >2po4_A Virion RNA polymerase; 34.5 32 0.00094 15.3 3.6 77 99-176 53-134 (195)
59 >2z3g_A Blasticidin-S deaminas 34.0 33 0.00096 15.3 3.3 45 1-56 1-47 (130)
60 >1fbv_A Signal transduction pr 30.7 37 0.0011 14.9 2.8 39 20-58 18-56 (86)
61 >3hzs_A Monofunctional glycosy 30.3 37 0.0011 14.9 5.2 68 176-245 46-121 (131)
62 >3bux_B E3 ubiquitin-protein l 30.1 38 0.0011 14.9 2.8 39 20-58 18-56 (84)
63 >2yu0_A Interferon-activable p 29.6 23 0.00069 16.2 1.3 64 70-144 10-73 (94)
64 >1lfd_A Ralgds; RAL, effector 29.5 31 0.00092 15.4 1.9 38 31-68 43-80 (87)
65 >1qme_A Penicillin-binding pro 27.9 20 0.0006 16.6 0.7 125 55-182 10-139 (157)
66 >1ti6_A Pyrogallol hydroxytran 27.0 43 0.0013 14.5 3.4 162 106-284 37-218 (234)
67 >1e25_A Extended-spectrum beta 26.7 21 0.00062 16.5 0.6 34 57-90 1-37 (123)
68 >2dbg_A MNDA, myeloid cell nuc 26.0 12 0.00036 18.1 -0.7 73 60-143 7-79 (103)
69 >1xp4_A D-alanyl-D-alanine car 25.6 19 0.00055 16.8 0.2 22 57-78 2-23 (179)
70 >1qlm_A Methenyltetrahydrometh 24.1 37 0.0011 14.9 1.5 33 31-63 135-171 (174)
71 >2ong_A 4S-limonene synthase; 23.5 13 0.00039 17.8 -0.9 77 109-188 9-91 (140)
72 >2olv_A Penicillin-binding pro 23.1 22 0.00065 16.4 0.2 21 58-78 1-22 (101)
73 >3bk2_A RNAse J, metal depende 20.4 51 0.0015 14.0 1.6 24 34-57 22-45 (134)
No 1
>>3czd_A Glutaminase kidney isoform; glutamine, glutamate, K-glutaminase, SGC, structural genomics consortium, alternative splicing, ANK repeat, hydrolase; HET: GLU; 2.40A {Homo sapiens} (A:)
Probab=100.00 E-value=0 Score=879.40 Aligned_cols=305 Identities=36% Similarity=0.621 Sum_probs=295.7
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC-H
Q ss_conf 997999999999997760799999828332059824702899808997887668786401999999999999996112-8
Q gi|254780186|r 1 MDLKKIIDGIYEEIKPQIGQGRVADYIPELAKVRIDHFGMSLALEDGTVYSVGESEFLFSIQSISKVFLLTIALRKFD-E 79 (311)
Q Consensus 1 md~~~~l~~~~~~~~~~~~~G~vA~YIP~La~vdp~~fgiai~t~dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G-~ 79 (311)
|++++.|+++++++|+. .+||||||||+||+|||++|||||||+||++|++||++++||||||||||+|++||+++| |
T Consensus 7 ~~~~~~l~~~~~~~~~~-~~G~va~YIP~La~vdp~~~giai~t~dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~~ 85 (315)
T 3czd_A 7 MSFTSHIDELYESAKKQ-SGGKVADYIPQLAKFSPDLWGVSVCTVDGQRHSTGDTKVPFCLQSCVKPLKYAIAVNDLGTE 85 (315)
T ss_dssp HHHHHHHHHHHHHHHTC-CCCEECCSSHHHHTSCTTCCEEEEEETTSCEEEEESTTSCEECGGGGHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHCCCHHHCEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCHH
T ss_conf 99999999999995014-79977871577627793680899992799889527989966259899999999999987989
Q ss_pred HHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf 99999465765677204442011489847631113799999864488888999999999999872899862478999985
Q gi|254780186|r 80 EIWKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSE 159 (311)
Q Consensus 80 ~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE 159 (311)
+||+|||+||||+||||+.++| +|+|||||||||||++||||++..+.++||+++++|+++++|++.+.+|++||+||
T Consensus 86 ~V~~~VG~EPSg~~FNsl~~~e--~~~P~NPmINaGAI~~~sli~~~~~~~~r~~~il~~~~~l~g~~~i~~d~~v~~SE 163 (315)
T 3czd_A 86 YVHRYVGKEPSGLRFNKLFLNE--DDKPHNPMVNAGAIVVTSLIKQGVNNAEKFDYVMQFLNKMAGNEYVGFSNATFQSE 163 (315)
T ss_dssp HHHTTSCSSCCSCC---CCCCT--TSSCSCTTSHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHTTTCCCEECHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 9998718898999876630035--79999940206899999986149986999999999999983899875379999997
Q ss_pred HCCCHHHHHHHHHHHHCCCCCC--CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHH
Q ss_conf 1124127999999982788889--98999999998730000799999999998259707778875518999977554454
Q gi|254780186|r 160 IETGYRNFALANFVRSYGNIRY--KIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVML 237 (311)
Q Consensus 160 ~~t~~rN~ala~~Lk~~g~~~~--dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~ 237 (311)
++|++|||||||+||++|+|++ |++++||+||||||+++||+|||+||+||||+|+||+||+|+++++++|+++++|+
T Consensus 164 ~~t~~rN~AlA~~Lk~~g~i~~~~d~~~~Ld~Y~~~Csi~~t~~dLA~~~a~LAn~G~~P~tg~~vl~~~~~r~v~s~M~ 243 (315)
T 3czd_A 164 RESGDRNFAIGYYLKEKKCFPEGTDMVGILDFYFQLCSIEVTCESASVMAATLANGGFCPITGERVLSPEAVRNTLSLMH 243 (315)
T ss_dssp HHHCHHHHHHHHHHHHTTCSCTTCCHHHHHHHHHHHHTEEECHHHHHHHHHHHHTTTBCTTTCCBCSCHHHHHHHHHHHH
T ss_pred HHCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHH
T ss_conf 50118999999999977997999988999999999847730099999999999758958998885268999999999997
Q ss_pred HCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 11331256678987078715652211033437851799875320778984899999999999948656486
Q gi|254780186|r 238 TCGHYDHSGDFAYRVGFPGKSGVGGGILAIVPSKASIAVWSPGLDNSGNSLLGAKALELLAIRTGWSIFDP 308 (311)
Q Consensus 238 TcGmYd~SG~fa~~VGlPaKSGVgGgilavvPg~~gIav~SP~LD~~GNSv~G~~~le~ls~~l~l~iF~~ 308 (311)
||||||+||+|||+||||||||||||||+||||++|||||||+||++||||||+++||.|+++|+||+||.
T Consensus 244 tcGmYd~SG~fa~~VGlPaKSGVgGgIlavvPg~~gIav~SP~LD~~GNSv~G~~~le~ls~~~~l~~fd~ 314 (315)
T 3czd_A 244 SCGMYDFSGQFAFHVGLPAKSGVAGGILLVVPNVMGMMCWSPPLDKMGNSVKGIHFCHDLVSLCNFHNYDN 314 (315)
T ss_dssp HHTTGGGHHHHHHHTCSCEEECTTSEEEEEETTTEEEEEECSEECTTSSBHHHHHHHHHHHHHHCCCTTCC
T ss_pred HCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 73998218889999198412566662799937960899989886888885999999999999709532467
No 2
>>1u60_A Probable glutaminase YBAS; structural genomics, APC5046, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.61A {Escherichia coli} (A:60-201)
Probab=100.00 E-value=0 Score=389.63 Aligned_cols=141 Identities=30% Similarity=0.539 Sum_probs=136.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHCC-HHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 6401999999999999996112-899999465765677204442011489847631113799999864488888999999
Q gi|254780186|r 57 FLFSIQSISKVFLLTIALRKFD-EEIWKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVSDAVLGSSSADDAIEN 135 (311)
Q Consensus 57 ~~FsiqSisK~f~l~~al~~~G-~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~ 135 (311)
++||||||||||+|++||+++| |+||+|||+||||+||||+.+||.++|+|||||||||||++||||.+ ...++||++
T Consensus 1 ~~F~iQSisK~f~~~lAl~~~G~e~V~~~VG~ePsG~~FNsi~~le~~~g~P~NPmiNaGAI~~~sLi~~-~~~~~~~~~ 79 (142)
T 1u60_A 1 YRFALESISKVCTLALALEDVGPQAVQDKIGADPTGLPFNSVIALELHGGKPLSPLVNAGAIATTSLINA-ENVEQRWQR 79 (142)
T ss_dssp CCEECGGGHHHHHHHHHHHHHCHHHHHHHTCSCCCSSCTTCHHHHHHTTTCCCCTTSHHHHHHHHHHSCC-SSHHHHHHH
T ss_pred CCEEHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHCC-CCHHHHHHH
T ss_conf 8770799999999999997669899999857688878985166520369997895354347887675406-882799999
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 9999998728998624789999851124127999999982788889989999999987300007
Q gi|254780186|r 136 FLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDVLKFYFHQCSLMMN 199 (311)
Q Consensus 136 i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~~Csi~~t 199 (311)
|++++++++| +++.+|++||+||++|++|||||||+||++|+|++||+++||+||||||++||
T Consensus 80 i~~~~~~~~g-~~l~~d~~v~~SE~~t~~rNralAy~Lk~~g~i~~d~~~~Ld~Yf~~CSi~vt 142 (142)
T 1u60_A 80 ILHIQQQLAG-EQVALSDEVNQSEQTTNFHNRAIAWLLYSAGYLYCDAMEACDVYTRQCSTLLN 142 (142)
T ss_dssp HHHHHHHHHC-TTCEECHHHHHHHHTTCHHHHHHHHHHHHHTCCCSCHHHHHHHHHHHTTEEEC
T ss_pred HHHHHHHHCC-CCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 9999999649-98865889999987433899999999997799889999999999998523500
No 3
>>2pby_A Glutaminase; secsg, riken, structural genomics, PSI, protein structure initiative; 2.07A {Geobacillus kaustophilus HTA426} (A:1-65,A:198-308)
Probab=100.00 E-value=0 Score=352.75 Aligned_cols=174 Identities=39% Similarity=0.651 Sum_probs=170.9
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHH
Q ss_conf 99799999999999776079999982833205982470289980899788766878640199999999999999611289
Q gi|254780186|r 1 MDLKKIIDGIYEEIKPQIGQGRVADYIPELAKVRIDHFGMSLALEDGTVYSVGESEFLFSIQSISKVFLLTIALRKFDEE 80 (311)
Q Consensus 1 md~~~~l~~~~~~~~~~~~~G~vA~YIP~La~vdp~~fgiai~t~dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~~ 80 (311)
|+++++|++|++++|+++++|+||||||+||+|||++|||||||+||++|++||++++|||||
T Consensus 3 ~~~~~~l~~~~~~~~~~~~~G~va~YIP~La~~~~~~fgi~i~~~dg~~~~~Gd~~~~FsiqS----------------- 65 (176)
T 2pby_A 3 VYNQEELVRFVEEAKQYARYGKVADYIPALGKANPNELSIAIYTPDDEVVSAGDVTVKVTLQS----------------- 65 (176)
T ss_dssp CCCHHHHHHHHHHHHTTGGGCBCCCSSGGGGGSCTTCCEEEEEETTTEEEEEESTTCCEECTT-----------------
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHCEEEEEECCCCEEEECCCCCCCCHHH-----------------
T ss_conf 676999999999988765899988716876088958928999927997896079998783899-----------------
Q ss_pred HHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 99994657656772044420114898476311137999998644888889999999999998728998624789999851
Q gi|254780186|r 81 IWKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEI 160 (311)
Q Consensus 81 V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~ 160 (311)
T Consensus 66 -------------------------------------------------------------------------------- 65 (176)
T 2pby_A 66 -------------------------------------------------------------------------------- 65 (176)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCC
Q ss_conf 12412799999998278888998999999998730000799999999998259707778875518999977554454113
Q gi|254780186|r 161 ETGYRNFALANFVRSYGNIRYKIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCG 240 (311)
Q Consensus 161 ~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcG 240 (311)
+++|+.|||+++++|||+|++|.+++||+++++++.++++|.+||
T Consensus 66 -----------------------------------i~vt~~qLA~~~a~lANgG~~P~~~~~Vis~~~a~~i~~~M~~~~ 110 (176)
T 2pby_A 66 -----------------------------------IEMTCIDLARIGLVLALDGRDPHSSEPLMPLDVARICKTFMVTCG 110 (176)
T ss_dssp -----------------------------------BEECHHHHHHHHHHHHTTTBCTTTCCBSSCHHHHHHHHHHHHHSS
T ss_pred -----------------------------------CCCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCC
T ss_conf -----------------------------------404499999999999678927998896468899899999987637
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 312566789870787156522110334378517998753207789848999999999999486564
Q gi|254780186|r 241 HYDHSGDFAYRVGFPGKSGVGGGILAIVPSKASIAVWSPGLDNSGNSLLGAKALELLAIRTGWSIF 306 (311)
Q Consensus 241 mYd~SG~fa~~VGlPaKSGVgGgilavvPg~~gIav~SP~LD~~GNSv~G~~~le~ls~~l~l~iF 306 (311)
+||.||+|++++|+|+||||+|++++++|+.+++++|||+||.+|||++|..++|.+++.+++|+|
T Consensus 111 ~~~~sg~~a~~~gi~gKTGTag~~v~~~P~~~~~~~~~p~~~~~Gns~ag~~~~~~l~~~l~~~iF 176 (176)
T 2pby_A 111 MYNSSGEFAIKVGIPAKSGVSGGILAAVPGRCGIGVFGPALDDKGNSLTGVKLLERLSKTYSLSIF 176 (176)
T ss_dssp STTCHHHHHHHTCSCEEECTTSEEEEEETTTEEEEEECCCBCTTSSBHHHHHHHHHHHHHHTCCCC
T ss_pred CCCCHHHHHHHCCCCEEECCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 731002258862861210577538999579607999898768888869999999999998487769
No 4
>>2pby_A Glutaminase; secsg, riken, structural genomics, PSI, protein structure initiative; 2.07A {Geobacillus kaustophilus HTA426} (A:66-197)
Probab=100.00 E-value=0 Score=353.49 Aligned_cols=131 Identities=36% Similarity=0.641 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHHCC-HHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 999999999996112-8999994657656772044420114898476311137999998644888889999999999998
Q gi|254780186|r 64 ISKVFLLTIALRKFD-EEIWKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENFLNFMRG 142 (311)
Q Consensus 64 isK~f~l~~al~~~G-~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~~ 142 (311)
|||||+|++||+++| |+||+|||+||||+|||||++||.++|+|||||||||||++||||.+ ...++||+++++|+++
T Consensus 1 IsK~f~~~lAl~~~G~~~V~~~VG~ePsg~~FNSi~~le~~~g~P~NPmINaGAI~~~sll~~-~~~~~r~~~il~~~~~ 79 (132)
T 2pby_A 1 ISKIIALALVLIDRGEDEVFHKVGMEPTDYPFHSIAKLEEKPAKPLNPMINAGALVVTSMIQG-GSVSERLERLLAFVRR 79 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHBCSCC----------------CCBCTTSHHHHHHHHTTSCS-SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC-CCHHHHHHHHHHHHHH
T ss_conf 999999999999879899999956688878972045400358998995104659999871136-8868999999999999
Q ss_pred HHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 72899862478999985112412799999998278888998999999998730
Q gi|254780186|r 143 IAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDVLKFYFHQCS 195 (311)
Q Consensus 143 lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~~Cs 195 (311)
+||++++.+|++||+||++|++||||||||||++|+|++||+++||+||||||
T Consensus 80 lag~~~i~~de~v~~SE~~t~~rN~AiAy~Lks~g~i~~d~~~~Ld~Yf~qCS 132 (132)
T 2pby_A 80 LAGNERISYSDEVARSEFETAFLNRSLCYFLKQHRIIDEDVEELMELYTKQCA 132 (132)
T ss_dssp HHTCTTCCBCHHHHHHHHHHCHHHHHHHHHHHHTTSCCSCHHHHHHHHHHHHT
T ss_pred HHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
T ss_conf 74899876579999866405499999999999559978899999999999817
No 5
>>3ih8_A Salt-tolerant glutaminase; hydrolase; 2.30A {Micrococcus luteus} PDB: 3if5_A 3ih9_A 3iha_A* 3ihb_A 2dfw_A (A:1-65,A:196-309)
Probab=100.00 E-value=0 Score=341.28 Aligned_cols=176 Identities=33% Similarity=0.564 Sum_probs=171.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 97999999999997760799999828332059824702899808997887668786401999999999999996112899
Q gi|254780186|r 2 DLKKIIDGIYEEIKPQIGQGRVADYIPELAKVRIDHFGMSLALEDGTVYSVGESEFLFSIQSISKVFLLTIALRKFDEEI 81 (311)
Q Consensus 2 d~~~~l~~~~~~~~~~~~~G~vA~YIP~La~vdp~~fgiai~t~dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~~V 81 (311)
+++++|+++++++|+. .+|+||+|||+||+|||++||||||++||++|++||++++|+||||
T Consensus 4 ~~~~~l~~~~~~~~~~-~~G~~a~YIP~La~~~~~~~~~~~~~~~g~~~~~gd~~~~f~~qsi----------------- 65 (179)
T 3ih8_A 4 PIPDYLASLVTELGAV-NPGETAQYIPVLAEADPDRFGIALATPTGRLHCAGDADVEFTIQSA----------------- 65 (179)
T ss_dssp HHHHHHHHHHHHHHTC-CCSBCCTTSHHHHSSCSCCCEEEEECSSSCEEEEESTTCCEECGGG-----------------
T ss_pred CHHHHHHHHHHHCCCC-CCCCCCCCCHHHCCCCHHHCEEEEEECCCCEEECCCCCCCEEEEHH-----------------
T ss_conf 5699999999963338-8998887267650889478489999259988955788996720017-----------------
Q ss_pred HHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC
Q ss_conf 99946576567720444201148984763111379999986448888899999999999987289986247899998511
Q gi|254780186|r 82 WKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIE 161 (311)
Q Consensus 82 ~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~ 161 (311)
T Consensus 66 -------------------------------------------------------------------------------- 65 (179)
T 3ih8_A 66 -------------------------------------------------------------------------------- 65 (179)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCC
Q ss_conf 24127999999982788889989999999987300007999999999982597077788755189999775544541133
Q gi|254780186|r 162 TGYRNFALANFVRSYGNIRYKIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGH 241 (311)
Q Consensus 162 t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGm 241 (311)
|+++|+.+||.++++|||+|++|.+++||+++++++.++++|.+||+
T Consensus 66 ---------------------------------si~vt~~qLA~a~a~lAN~G~~P~~~~~Vis~~~a~~i~~~M~~v~~ 112 (179)
T 3ih8_A 66 ---------------------------------AVLVTVKDLAVMGACLATGGIHPMTGERMLPSIVARRVVSVMTSSGM 112 (179)
T ss_dssp ---------------------------------TBEECHHHHHHHHHHHHTTSBCTTTCCBCSCHHHHHHHHHHHHHHTT
T ss_pred ---------------------------------CCCCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCC
T ss_conf ---------------------------------73266999999999997699489988975688999999999864688
Q ss_pred CHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 1256678987078715652211033437851799875320778984899999999999948656486
Q gi|254780186|r 242 YDHSGDFAYRVGFPGKSGVGGGILAIVPSKASIAVWSPGLDNSGNSLLGAKALELLAIRTGWSIFDP 308 (311)
Q Consensus 242 Yd~SG~fa~~VGlPaKSGVgGgilavvPg~~gIav~SP~LD~~GNSv~G~~~le~ls~~l~l~iF~~ 308 (311)
|+.||+|++++|+|+|||++|++++++|++++|++|+|++|.+|||++|..+++.+++.+++|+||.
T Consensus 113 ~~~sg~~a~~~gi~gKTGTsgw~vg~~P~~~~i~~~~p~~~~~G~s~ag~~~~~~l~~~l~~~~f~~ 179 (179)
T 3ih8_A 113 YDAAGQWLADVGIPAKSGVAGGVLGALPGRVGIGVFSPRLDEVGNSARGVLACRRLSEDFRLHLMDG 179 (179)
T ss_dssp GGGHHHHHHHTCCCEEECTTSEEEEEETTTEEEEEECCCBCTTSSBHHHHHHHHHHHHHHTCCTTCC
T ss_pred CCCHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 6223448998097400267761799937963899988876888887999999999999829620479
No 6
>>1mki_A Probable glutaminase YBGJ; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; HET: SEP; 2.00A {Bacillus subtilis} (A:78-209)
Probab=100.00 E-value=0 Score=342.38 Aligned_cols=130 Identities=34% Similarity=0.520 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHCC-HHHHHHHCCCCCCCCCHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 999999999996112-899999465765677204442011-489847631113799999864488888999999999999
Q gi|254780186|r 64 ISKVFLLTIALRKFD-EEIWKRVGREPSGSSFDSIVQLEN-ENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENFLNFMR 141 (311)
Q Consensus 64 isK~f~l~~al~~~G-~~V~~~VG~ePSg~~FNSi~~Le~-~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~ 141 (311)
|||||+|++||+++| |+||+|||+||||+||||+++||. ++|+|+|||||||||++||||.+ ...+++|++++.+++
T Consensus 1 ISK~f~~~lAl~~~G~~~V~~~VG~EPSG~~FNsi~~le~~~~g~P~NP~iNaGAI~~~sli~~-~~~~~r~~~i~~~~~ 79 (132)
T 1mki_A 1 ISKVISFIAACXSRGIPYVLDRVDVEPTGDAFNSIIRLEINKPGKPFNPXINAGALTIASILPG-ESAYEKLEFLYSVXE 79 (132)
T ss_dssp GHHHHHHHHHHHHHCHHHHHTTCCCCCCSSCTTCCHHHHHSTTCCCSCSSSHHHHHHHHHHSSS-SSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC-CCHHHHHHHHHHHHH
T ss_conf 8999999999998797999998487888999850877750379997885344559999885148-987899999999999
Q ss_pred HHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 872899862478999985112412799999998278888998999999998730
Q gi|254780186|r 142 GIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDVLKFYFHQCS 195 (311)
Q Consensus 142 ~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~~Cs 195 (311)
.++| +++.+|++||+||++|++||||||||||++|+|++||+++||+||||||
T Consensus 80 ~~~~-~~l~~d~~v~~SE~~t~~rNraiAy~Lks~g~i~~d~~~~Ld~Yf~qCS 132 (132)
T 1mki_A 80 TLIG-KRPRIHEEVFRSEWETAHRNRALAYYLKETNFLEAEVEETLEVYLKQCA 132 (132)
T ss_dssp HHHS-SCCCBCHHHHHHHHHHCHHHHHHHHHHHHTTCCSSCHHHHHHHHHHHHT
T ss_pred HHCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
T ss_conf 9649-9886578999998861599999999999779978899999999999827
No 7
>>3ih8_A Salt-tolerant glutaminase; hydrolase; 2.30A {Micrococcus luteus} PDB: 3if5_A 3ih9_A 3iha_A* 3ihb_A 2dfw_A (A:66-195)
Probab=100.00 E-value=0 Score=332.10 Aligned_cols=128 Identities=32% Similarity=0.547 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHCC-HHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHH
Q ss_conf 99999999996112-899999465765677204442011489847631113799999864488-8889999999999998
Q gi|254780186|r 65 SKVFLLTIALRKFD-EEIWKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVSDAVLGS-SSADDAIENFLNFMRG 142 (311)
Q Consensus 65 sK~f~l~~al~~~G-~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~sli~~~-~~~~~~~~~i~~~~~~ 142 (311)
||||+|++||+++| |+||+|||+||||+||||| +||.++|+|+|||||||||++||||.+. .+.++||+++++++++
T Consensus 1 SK~~~~~lAl~~~G~~~V~~~VG~ePSg~~FNsi-~l~~~~g~P~NPmiNaGAI~~~sll~~~~~~~~~r~~~i~~~~~~ 79 (130)
T 3ih8_A 1 SKPFTYAAALVDRGFAAVDRQVGLNPSGEAFNEL-SLEAESHRPDNAMINAGALAVHQLLVGPEASRKERLDRAVEIMSL 79 (130)
T ss_dssp GHHHHHHHHHHHHHHHHHHTTCCCCCCCSSCBTH-HHHTTTTCCSCTTSHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCE-EECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 9999999999877989999871889899997310-004568998796155439999998726899999999999999998
Q ss_pred HHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 7289986247899998511241279999999827888899899999999873
Q gi|254780186|r 143 IAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDVLKFYFHQC 194 (311)
Q Consensus 143 lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~~C 194 (311)
++| +++.+|++||+||++|++||||||||||++|+|++||+++||+|||||
T Consensus 80 ~~g-~~i~~d~~v~~SE~~t~~rN~aiAy~Lks~g~i~~d~~~~Ld~Yf~qC 130 (130)
T 3ih8_A 80 LAG-RRLSVDWETYESEMAVSDRNLSLAHMLRSYGVLQDSAEEIVAGYVAQC 130 (130)
T ss_dssp HHT-SCCCBCHHHHHHHHTTCHHHHHHHHHHHHTTSCCSCHHHHHHHHHHHH
T ss_pred HCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 369-987758899999865159999999999977998998899999999970
No 8
>>1mki_A Probable glutaminase YBGJ; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; HET: SEP; 2.00A {Bacillus subtilis} (A:1-77,A:210-330)
Probab=100.00 E-value=0 Score=322.37 Aligned_cols=174 Identities=35% Similarity=0.580 Sum_probs=169.6
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHH
Q ss_conf 99799999999999776079999982833205982470289980899788766878640199999999999999611289
Q gi|254780186|r 1 MDLKKIIDGIYEEIKPQIGQGRVADYIPELAKVRIDHFGMSLALEDGTVYSVGESEFLFSIQSISKVFLLTIALRKFDEE 80 (311)
Q Consensus 1 md~~~~l~~~~~~~~~~~~~G~vA~YIP~La~vdp~~fgiai~t~dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~~ 80 (311)
||++++|++|++++|+..++|+||+|||+||+|||++||||||++||++|++||++++|||||
T Consensus 15 ~~~~~~l~~~~~~~~~~~~~G~va~YIP~La~~dp~~~gi~i~~~~g~~~~~Gd~~~~F~iqS----------------- 77 (198)
T 1mki_A 15 INPALQLHDWVEYYRPFAANGQSANYIPALGKVNDSQLGICVLEPDGTXIHAGDWNVSFTXQX----------------- 77 (198)
T ss_dssp -CHHHHHHHHHHHHGGGGGGCBCCC---------TTCCEEEEECTTSCEEEEESTTCCEECGG-----------------
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHCEEEEEECCCCEEECCCCCCCEEHHH-----------------
T ss_conf 270757999999964551699887706776087937868999937997896688688644799-----------------
Q ss_pred HHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 99994657656772044420114898476311137999998644888889999999999998728998624789999851
Q gi|254780186|r 81 IWKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEI 160 (311)
Q Consensus 81 V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~ 160 (311)
T Consensus 78 -------------------------------------------------------------------------------- 77 (198)
T 1mki_A 78 -------------------------------------------------------------------------------- 77 (198)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCC
Q ss_conf 12412799999998278888998999999998730000799999999998259707778875518999977554454113
Q gi|254780186|r 161 ETGYRNFALANFVRSYGNIRYKIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCG 240 (311)
Q Consensus 161 ~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcG 240 (311)
+++|+.|||+++++|||+|++|.+++||++++++++++++|.+||
T Consensus 78 -----------------------------------~~vTplqlA~~~a~lANgGv~P~~~~~Vis~~~a~~v~~~m~~~~ 122 (198)
T 1mki_A 78 -----------------------------------XESTTEDIALIGLILAHDGYHPIRHEQVIPKDVAKLAKALXLTCG 122 (198)
T ss_dssp -----------------------------------BEECHHHHHHHHHHHHTTTEETTTTEECSCHHHHHHHHHHHHHHT
T ss_pred -----------------------------------CCCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCC
T ss_conf -----------------------------------326699999999999779968998880068899999999987348
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCEEEEEECCC----------CEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 3125667898707871565221103343785----------17998753207789848999999999999486564
Q gi|254780186|r 241 HYDHSGDFAYRVGFPGKSGVGGGILAIVPSK----------ASIAVWSPGLDNSGNSLLGAKALELLAIRTGWSIF 306 (311)
Q Consensus 241 mYd~SG~fa~~VGlPaKSGVgGgilavvPg~----------~gIav~SP~LD~~GNSv~G~~~le~ls~~l~l~iF 306 (311)
+||.||+|++++|+|+||++|+++.++.|+. ++|++|||++|.+|||++|..++|.+++.+++|||
T Consensus 123 ~~~gtg~~a~~~G~p~agKTGTa~~~~~~~~~g~~~~~~~~~~i~~~~p~~d~~Gns~ag~~~~~~~~~~~~~~if 198 (198)
T 1mki_A 123 XYNASGKYAAFVGVPAKSGVSGGIXALVPPSARREQPFQSGCGIGIYGPAIDEYGNSLTGGXLLKHXAQEWELSIF 198 (198)
T ss_dssp TGGGHHHHHHHTCSCEEECTTSEEEEEECTTTTCSSTTTTCEEEEEECSCBCTTSSBHHHHHHHHHHHHHHTCCCC
T ss_pred CCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 6100344899808740126777149996786664544677606999888767888859999999999998587769
No 9
>>1u60_A Probable glutaminase YBAS; structural genomics, APC5046, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.61A {Escherichia coli} (A:1-59,A:202-310)
Probab=100.00 E-value=2.8e-45 Score=315.15 Aligned_cols=163 Identities=42% Similarity=0.684 Sum_probs=157.5
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 97999999999997760799999828332059824702899808997887668786401999999999999996112899
Q gi|254780186|r 2 DLKKIIDGIYEEIKPQIGQGRVADYIPELAKVRIDHFGMSLALEDGTVYSVGESEFLFSIQSISKVFLLTIALRKFDEEI 81 (311)
Q Consensus 2 d~~~~l~~~~~~~~~~~~~G~vA~YIP~La~vdp~~fgiai~t~dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~~V 81 (311)
+++++|+++++++|+. .+|+||||||+||+|||++||||||++||++|++||+|
T Consensus 6 ~~~~~l~~~~~~~~~~-~~G~vA~YIP~La~~dp~~fgi~~~~~~g~~~~~gd~~------------------------- 59 (168)
T 1u60_A 6 KLQQAVDQAYTQFHSL-NGGQNADYIPFLANVPGQLAAVAIVTCDGNVYSAGDSD------------------------- 59 (168)
T ss_dssp HHHHHHHHHHHHHTTC-CCCBCCCSSHHHHTSCTTCCEEEEEETTSCEEEEESTT-------------------------
T ss_pred HHHHHHHHHHHHHCCC-CCCCCCCCCHHHHCCCHHHEEEEEEECCCCEEECCCCC-------------------------
T ss_conf 9999999999981548-89978871676508881784999996799289557859-------------------------
Q ss_pred HHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC
Q ss_conf 99946576567720444201148984763111379999986448888899999999999987289986247899998511
Q gi|254780186|r 82 WKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIE 161 (311)
Q Consensus 82 ~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~ 161 (311)
T Consensus 60 -------------------------------------------------------------------------------- 59 (168)
T 1u60_A 60 -------------------------------------------------------------------------------- 59 (168)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCC
Q ss_conf 24127999999982788889989999999987300007999999999982597077788755189999775544541133
Q gi|254780186|r 162 TGYRNFALANFVRSYGNIRYKIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGH 241 (311)
Q Consensus 162 t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGm 241 (311)
|.|||.++++|||+|++|.+++|+++++++++++++|.+||+
T Consensus 60 --------------------------------------p~qlA~~~atlAN~G~~P~~~~rvis~~~a~~i~~~M~~v~~ 101 (168)
T 1u60_A 60 --------------------------------------TIELATLGATLAAGGVNPLTHKRVLQADNVPYILAEMMMEGL 101 (168)
T ss_dssp --------------------------------------HHHHHHHHHHHHTTSEETTTTEECSCGGGHHHHHHHHHHHTT
T ss_pred --------------------------------------HHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCC
T ss_conf --------------------------------------999999999997699188887734478899999999875377
Q ss_pred CHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 1256678987078715652211033437851799875320778984899999999999948656486
Q gi|254780186|r 242 YDHSGDFAYRVGFPGKSGVGGGILAIVPSKASIAVWSPGLDNSGNSLLGAKALELLAIRTGWSIFDP 308 (311)
Q Consensus 242 Yd~SG~fa~~VGlPaKSGVgGgilavvPg~~gIav~SP~LD~~GNSv~G~~~le~ls~~l~l~iF~~ 308 (311)
||.||+|++++|+|+||||+|++++++|++++|++|||++|.+|||++|..+++.+++.++||+||.
T Consensus 102 ~~~sg~~a~~~gi~gKTGTsg~~~a~~P~~~~i~v~~p~~d~~Gns~ag~~~~~~l~~~l~~~if~~ 168 (168)
T 1u60_A 102 YGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGIAAFSPPLDEDGNSVRGQKMVASVAKQLGYNVFKG 168 (168)
T ss_dssp GGGHHHHHHHTCSCEEECTTSEEEEEETTTEEEEEECSCBCTTSCBHHHHHHHHHHHHHHTCCTTCC
T ss_pred CCCHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 3231338998287111577761699947960899989887988887999999999999838343488
No 10
>>1vqq_A Saupbp2A, penicillin-binding protein MECA, low-affinity; beta-lactam, D- transpeptidase, D-carboxypeptidase, biosynthetic protein; 1.80A {Staphylococcus aureus} (A:370-564)
Probab=96.53 E-value=0.0004 Score=47.17 Aligned_cols=164 Identities=15% Similarity=0.020 Sum_probs=96.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCC---CC-CCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC-CCCH
Q ss_conf 78640199999999999999611289999946576---56-7720444201148984763111379999986448-8888
Q gi|254780186|r 55 SEFLFSIQSISKVFLLTIALRKFDEEIWKRVGREP---SG-SSFDSIVQLENENGIPRNPFVNAGAIVVSDAVLG-SSSA 129 (311)
Q Consensus 55 ~~~~FsiqSisK~f~l~~al~~~G~~V~~~VG~eP---Sg-~~FNSi~~Le~~~g~P~NPmiNAGAI~~~sli~~-~~~~ 129 (311)
+...|+--|+-|||+++.||++..-...+.+...+ .+ ..++.- ..+..+..+.++-=+-|+..++=+.- +...
T Consensus 4 a~~~~~pGStfK~~t~~aale~g~~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~g~~~l~~Al~~S~N~~f~~l~~ 81 (195)
T 1vqq_A 4 FQITTSPGSTQKILTAMIGLNNKTLDDKTSYKIDGKGWQKDKSWGGY--NVTRYEVVNGNIDLKQAIESSDNIFFARVAL 81 (195)
T ss_dssp TTSCBCCGGGHHHHHHHHHHHTTSSCTTCEEEECSSEECSSGGGTTC--CEECSSCCCEEEEHHHHHHTTCHHHHHHHHH
T ss_pred HCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC--EECCCCCCCCCEEEEEHHHCCCCEEEEEEEC
T ss_conf 10320000111222211232322322342001222311102465532--0125568997053310132176068999721
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCC---CCHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 999999999999872899862478999985112412799999998278888---99899999999873000079999999
Q gi|254780186|r 130 DDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIR---YKIEDVLKFYFHQCSLMMNCVQLAKS 206 (311)
Q Consensus 130 ~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~---~dv~~~Ld~Yf~~Csi~~t~~dLA~~ 206 (311)
+--.+.+.++++++=-..+..++..-- ..+.++ .+.......++-+-.+.+|.-++|.+
T Consensus 82 ~lg~~~~~~~~~~~G~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~g~~~~tplq~a~~ 143 (195)
T 1vqq_A 82 ELGSKKFEKGMKKLGVGEDIPSDYPFY------------------NAQISNKNLDNEILLADSGYGQGEILINPVQILSI 143 (195)
T ss_dssp HHCHHHHHHHHHHTTTTSCCCCSSCCC------------------CCBSCSSCCCSHHHHHHHHTTCSSCBBCHHHHHHH
T ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCC------------------CCCCCCCCCCCCCCEEECCCCCCEEEECHHHHHHH
T ss_conf 322222110000256444578631233------------------34467754566420000035652073269999999
Q ss_pred HHHHHCCC-----------CCCCCCCEECCHHHHHHHHHHHHH
Q ss_conf 99982597-----------077788755189999775544541
Q gi|254780186|r 207 GLYLAFRG-----------YNSLTNQSVISPLQSRCVNAVMLT 238 (311)
Q Consensus 207 ~a~LAn~G-----------~~P~t~~~vi~~~~~~~v~s~M~T 238 (311)
.+++||+| .++..++|+++++.+..+...|..
T Consensus 144 ~a~ian~G~~~~P~~i~~v~d~~~~~~~~~~~~~~~l~~~m~~ 186 (195)
T 1vqq_A 144 YSALENNGNINAPHLLKDTKNKVWKKNIISKENINLLTDGMQQ 186 (195)
T ss_dssp HHGGGTTTCEECCBCBTTSCCCEEECCCSCHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 9999749808511899557887677778999999999999999
No 11
>>3g4p_A Beta-lactamase OXA-24; plasmid, B-lactamases, enzyme mechanism, carbapenem, resistance, hydrolase; HET: KCX; 1.97A {Acinetobacter baumannii} PDB: 2jc7_A* 3fyz_A* 3fzc_A* 3fv7_A* (A:)
Probab=96.11 E-value=0.024 Score=35.60 Aligned_cols=230 Identities=10% Similarity=-0.054 Sum_probs=122.8
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHCEEEEEECCCCEEE-ECC-CCCCCCHHHHHHHHHHHHHHHHCCH
Q ss_conf 97999999999997760799999828332059824702899808997887-668-7864019999999999999961128
Q gi|254780186|r 2 DLKKIIDGIYEEIKPQIGQGRVADYIPELAKVRIDHFGMSLALEDGTVYS-VGE-SEFLFSIQSISKVFLLTIALRKFDE 79 (311)
Q Consensus 2 d~~~~l~~~~~~~~~~~~~G~vA~YIP~La~vdp~~fgiai~t~dG~~~~-~GD-~~~~FsiqSisK~f~l~~al~~~G~ 79 (311)
.+|..+++..++..+..+ .+. -.|++-..+|++.. .++ +..+|+.-|+-|||+++.||+..-
T Consensus 2 ~~Q~~~~~~l~~~~~~~~-~~g--------------a~vv~d~~tG~vlA~~~n~~~~~~~pGStfK~~~~~~ale~g~- 65 (244)
T 3g4p_A 2 ISSQQHEKAIKSYFDEAQ-TQG--------------VIIIKEGKNLSTYGNALARANKEYVPASTFXMLNALIGLENHK- 65 (244)
T ss_dssp CCHHHHHHHHHHHHHHTT-CCE--------------EEEEEETTEEEEEESCGGGGGCCBCCGGGHHHHHHHHHHHTTS-
T ss_pred CCHHHHHHHHHHHHHCCC-CCC--------------EEEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCC-
T ss_conf 315889999999973137-684--------------7999948987630464435518879974799999999998599-
Q ss_pred HHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf 99999465765677204442011489847631113799999864488888999999999999872899862478999985
Q gi|254780186|r 80 EIWKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSE 159 (311)
Q Consensus 80 ~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE 159 (311)
-+....++.-.. ......-+.++--..||.-++ .-.| .+...++ |-
T Consensus 66 --------~~~~~~~~~~~~-~~~~~~~~g~~~l~~al~~S~--------N~~~---~~l~~~i-G~------------- 111 (244)
T 3g4p_A 66 --------ATTNEIFKWDGK-KRTYPMWEKDMTLGEAMALSA--------VPVY---QELARRT-GL------------- 111 (244)
T ss_dssp --------CCSSCCBCCCSC-CCSSGGGSSCBCHHHHHHTTC--------HHHH---HHHHHHH-CH-------------
T ss_pred --------CCCCEEEEECCC-CCCCCCCCCCCCHHHHHHHCC--------HHHH---HHHHHHH-CC-------------
T ss_conf --------646406866994-102798898838999998558--------1999---9999983-92-------------
Q ss_pred HCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHC
Q ss_conf 11241279999999827888899899999999873000079999999999825970777887551899997755445411
Q gi|254780186|r 160 IETGYRNFALANFVRSYGNIRYKIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTC 239 (311)
Q Consensus 160 ~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~Tc 239 (311)
-.+.-+++.+|.-..+.++......-+-++.+|..++|.+.++|||+|. ..++..++.+...|-.-
T Consensus 112 -------~~~~~~~~~~G~~~~~~~~~~~~~~~~g~~~vsp~~~a~~~~~ian~g~-------~~~p~~~~~i~~~~~~~ 177 (244)
T 3g4p_A 112 -------ELMQKEVKRVNFGNTNIGTQVDNFWLVGPLKITPVQEVNFADDLAHNRL-------PFKLETQEEVKKMLLIK 177 (244)
T ss_dssp -------HHHHHHHHHHTCTTCCCTTCTTTHHHHSSCCBCHHHHHHHHHHHHTTCS-------SSCHHHHHHHHHTTEEE
T ss_pred -------HHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCC-------CCCHHHHHHHHHHHHHH
T ss_conf -------7889999987999888886541255458743029999999999973996-------34788999998777652
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCC-----EEEEEECCCCEEEEECCCCCCCCCCHHHHH---HHHHHHHHH
Q ss_conf 33125667898707871565221-----103343785179987532077898489999---999999994
Q gi|254780186|r 240 GHYDHSGDFAYRVGFPGKSGVGG-----GILAIVPSKASIAVWSPGLDNSGNSLLGAK---ALELLAIRT 301 (311)
Q Consensus 240 GmYd~SG~fa~~VGlPaKSGVgG-----gilavvPg~~gIav~SP~LD~~GNSv~G~~---~le~ls~~l 301 (311)
-.+. ..+....|+|-.+ -.++..|....--.+.-..++.|..+.+-. +++.+-+.+
T Consensus 178 ~~~~------~~~~~~~~tg~~~~~~~~wf~G~~p~~~~~~~~~~~~~~~g~~~a~~i~~~i~~~~~~~~ 241 (244)
T 3g4p_A 178 EVNG------SKIYAKSGWGMGVTPQVGWLTGWVEQANGKKIPFSLNLEMKEGMSGSIRNEITYKSLENL 241 (244)
T ss_dssp EETT------EEEEEEEEEECSSSSEEEEEEEEEECTTSCEEEEEEEEEECTTCCTHHHHHHHHHHHHHT
T ss_pred CCCC------CCCCCCEEECCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 2454------434432245323899878999987869997899999961799766289999999999974
No 12
>>3fwm_A Penicillin-binding protein 1B; bacterial cell WALL synthesis, antibiotics design, transferase, hydrolase; HET: M0E; 2.16A {Escherichia coli} PDB: 3fwl_A* (A:46-56,A:146-155,A:343-702)
Probab=95.96 E-value=0.048 Score=33.66 Aligned_cols=227 Identities=14% Similarity=0.064 Sum_probs=120.1
Q ss_pred HCEEEEEE-CCCCEEEEC---CC---------CCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHCCCCCCCC------CHH
Q ss_conf 70289980-899788766---87---------86401999999999999996112-899999465765677------204
Q gi|254780186|r 37 HFGMSLAL-EDGTVYSVG---ES---------EFLFSIQSISKVFLLTIALRKFD-EEIWKRVGREPSGSS------FDS 96 (311)
Q Consensus 37 ~fgiai~t-~dG~~~~~G---D~---------~~~FsiqSisK~f~l~~al~~~G-~~V~~~VG~ePSg~~------FNS 96 (311)
+-++.+.+ ..|++...- |. +..++.-|+-|||+++.||++.. -....++...|.... ++.
T Consensus 97 ~~a~vv~d~~TGeIlA~~g~~d~~~~~~n~a~~~~~~pGStfKp~~~aaal~~g~~~~~~~~~~d~p~~~~~~~~~~~~~ 176 (381)
T 3fwm_A 97 ETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGQVWSP 176 (381)
T ss_dssp EEEEEEEETTTCBEEEEECSSSCSSCSSCHHHHCCEECGGGGHHHHHHHHHTCTTTCCTTCEEECSCCCEECSSSCEECC
T ss_pred CCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCEEECCCCCCCCC
T ss_conf 42279886599988999614413445655111342343321103567888863875335427427771686699853477
Q ss_pred HHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHC
Q ss_conf 44201148984763111379999986448888899999999999987289986247899998511241279999999827
Q gi|254780186|r 97 IVQLENENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSY 176 (311)
Q Consensus 97 i~~Le~~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~ 176 (311)
...+...+.+.++-=..||+-++ .-.|-++ ..++ | ...+..+++.+
T Consensus 177 --~~~~~~~~~~G~itl~~al~~S~--------N~~~~~l---~~~l-g--------------------~~~~~~~~~~~ 222 (381)
T 3fwm_A 177 --QNDDRRYSESGRVMLVDALTRSM--------NVPTVNL---GMAL-G--------------------LPAVTETWIKL 222 (381)
T ss_dssp --CCTTSCCCTTSEEEHHHHHHTTC--------HHHHHHH---HHHH-C--------------------HHHHHHHHHHH
T ss_pred --CCCCCCCCCCCCEEHHHHHHCCC--------CEEEEEE---ECCC-C--------------------HHHHHHHHHHH
T ss_conf --66665446765232665542245--------2158873---2002-3--------------------02589999971
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC--------------------CCCCCEECCHHHHHHHHHHH
Q ss_conf 8888998999999998730000799999999998259707--------------------77887551899997755445
Q gi|254780186|r 177 GNIRYKIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYN--------------------SLTNQSVISPLQSRCVNAVM 236 (311)
Q Consensus 177 g~~~~dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~--------------------P~t~~~vi~~~~~~~v~s~M 236 (311)
|.-..+..... -.-+=.+.+|..+||.+.+++||+|+- ....+|+++++.+..+..+|
T Consensus 223 G~~~~~~~~~~--~~~~G~~~vtplqla~aya~iaN~G~~~~P~~i~~v~d~~G~~~~~~~~~~~~v~~~~~a~~~~~~l 300 (381)
T 3fwm_A 223 GVPKDQLHPVP--AMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTM 300 (381)
T ss_dssp TCCGGGCCCSG--GGGGTCCEECHHHHHHHHHHHHTTSEECCCBSEEEEECTTSCEEEECCCCCEECSCHHHHHHHHHHH
T ss_pred CCCCCCCCCCC--HHHCCCCCCCHHHHHHHHHHHHCCCEEECCEEEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 98854567881--5423888898889988998873498772678777798899988614799776167999999999999
Q ss_pred HHCCCCHHHHHHHHHH-C--CCCCCCCCCE----EEEEECCCCEEEEECCCC-----CCCCCCHHHHHHHHHHHH
Q ss_conf 4113312566789870-7--8715652211----033437851799875320-----778984899999999999
Q gi|254780186|r 237 LTCGHYDHSGDFAYRV-G--FPGKSGVGGG----ILAIVPSKASIAVWSPGL-----DNSGNSLLGAKALELLAI 299 (311)
Q Consensus 237 ~TcGmYd~SG~fa~~V-G--lPaKSGVgGg----ilavvPg~~gIav~SP~L-----D~~GNSv~G~~~le~ls~ 299 (311)
..---......+..++ | +=+|+|-+-+ -..---.++.++||-.-- ...|-+.++-.+-+.+.+
T Consensus 301 ~~vv~~Gt~~~~~~~~~~~~vaGKTGTs~~~~d~Wf~g~~p~~~~av~vg~d~~~~~~~~g~~~A~pi~~~im~~ 375 (381)
T 3fwm_A 301 QQVVQRGTGRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPTKLYGASGAMSIYQRYLAN 375 (381)
T ss_dssp HHHHHTSTTHHHHHHSGGGCCEEEEEECGGGSEEEEEEECSSEEEEEEEECTTCCCCCCCTTHHHHHHHHHHHHS
T ss_pred HHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 988655674120024999869998963789716999973799699999976799978782669999999999960
No 13
>>3hbr_A OXA-48; class D beta-lactamase, antibiotic, dimer, hydrolase; HET: KCX; 1.90A {Klebsiella pneumoniae} (A:)
Probab=95.28 E-value=0.023 Score=35.71 Aligned_cols=207 Identities=15% Similarity=0.022 Sum_probs=123.7
Q ss_pred HHCEEEEEE-CCCCEEEE--CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCH
Q ss_conf 470289980-89978876--687864019999999999999961128999994657656772044420114898476311
Q gi|254780186|r 36 DHFGMSLAL-EDGTVYSV--GESEFLFSIQSISKVFLLTIALRKFDEEIWKRVGREPSGSSFDSIVQLENENGIPRNPFV 112 (311)
Q Consensus 36 ~~fgiai~t-~dG~~~~~--GD~~~~FsiqSisK~f~l~~al~~~G~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmi 112 (311)
.+-++.+.. ..|++... +.+...|+.-|+-|||+++.||+..- -+....++.--......++.+.++-
T Consensus 40 ~~~~~v~~d~~tg~i~a~~~nr~~~~~~PGSt~K~~~~~~al~~g~---------~~~~~~~~~~~~~~~~~~~~~g~i~ 110 (265)
T 3hbr_A 40 SQGVVVLWNENKQQGFTNNLKRANQAFLPASTFXIPNSLIALDLGV---------VKDEHQVFKWDGQTRDIATWNRDHN 110 (265)
T ss_dssp CCEEEEEEETTTTEEEESCHHHHTCEECCGGGGHHHHHHHHHHTTS---------SCCTTCCBCCCSCCCSSGGGSSCBC
T ss_pred CCEEEEEEECCCCCEEECCHHHHCCCCCCCCHHHHHHHHHHHHCCC---------CCCCCCEEECCCCCCCCCCCCCCCC
T ss_conf 7469999978999577416334427989974599999999998599---------7997843406993533687689979
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 13799999864488888999999999999872899862478999985112412799999998278888998999999998
Q gi|254780186|r 113 NAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDVLKFYFH 192 (311)
Q Consensus 113 NAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~ 192 (311)
=..|++.++ .-.|.++ .+++ |. ..+..+++.+|.-..+....+....-
T Consensus 111 l~~al~~S~--------N~~~~~l---~~~i-g~--------------------~~~~~~l~~~G~~~~~~~~~~~~~~~ 158 (265)
T 3hbr_A 111 LITAMKYSV--------VPVYQEF---ARQI-GE--------------------ARMSKMLHAFDYGNEDISGNVDSFWL 158 (265)
T ss_dssp HHHHHHTTC--------HHHHHHH---HHHH-CH--------------------HHHHHHHHHHTCTTCCC-CCTTTHHH
T ss_pred HHHHHHHHC--------HHHHHHH---HHHC-CC--------------------HHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 999999708--------5999999---7761-94--------------------26799999779999888888776504
Q ss_pred HHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC-------CEEE
Q ss_conf 730000799999999998259707778875518999977554454113312566789870787156522-------1103
Q gi|254780186|r 193 QCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFPGKSGVG-------GGIL 265 (311)
Q Consensus 193 ~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlPaKSGVg-------Ggil 265 (311)
+-++.+|..++|.+.++|||+|+ .+++..++.+...+-..--.. ...+.|.|-+ +-..
T Consensus 159 ~g~~~~tplq~a~~y~~ian~G~-------~~~p~~i~~i~~~~~~~~~~~--------~~~~~k~~T~~~~~~~~~wf~ 223 (265)
T 3hbr_A 159 DGGIRISATEQISFLRKLYHNKL-------HVSERSQRIVKQAMLTEANGD--------YIIRAKTGYSTRIEPKIGWWV 223 (265)
T ss_dssp HSSCCEEHHHHHHHHHHHHTTCS-------SSCHHHHHHHHHHTEEEECSS--------CEEEEEEEEECSSSSCEEEEE
T ss_pred CCCEEEEHHHHHHHHHHHHCCCC-------CCCHHHHHHHHHHHHHHHCCC--------CEEEEEEEEECCCCCCCEEEE
T ss_conf 78701228999999999975996-------788899999999987502179--------247754157304899968999
Q ss_pred EEECC---CCEEEEECCCCCCCCCCHHHHHHHHHHH
Q ss_conf 34378---5179987532077898489999999999
Q gi|254780186|r 266 AIVPS---KASIAVWSPGLDNSGNSLLGAKALELLA 298 (311)
Q Consensus 266 avvPg---~~gIav~SP~LD~~GNSv~G~~~le~ls 298 (311)
+..|. +..+++|-+.=+..|-.+++-.+-+.+-
T Consensus 224 G~~p~~~~~~~v~v~v~~~~~~g~~~aa~i~~~i~~ 259 (265)
T 3hbr_A 224 GWVELDDNVWFFAMNMDMPTSDGLGLRQAITKEVLK 259 (265)
T ss_dssp EEEECSSCEEEEEEEEECSSGGGTTHHHHHHHHHHH
T ss_pred EEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 999869986999999757998866999999999999
No 14
>>1k55_A Beta lactamase OXA-10; antibiotic resistance, carbamylation, hydrolase; HET: KCX SO4; 1.39A {Pseudomonas aeruginosa} (A:)
Probab=95.17 E-value=0.018 Score=36.47 Aligned_cols=220 Identities=10% Similarity=-0.043 Sum_probs=126.2
Q ss_pred CCHHHCEEEEEE-CCCCEEE-EC-CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCC
Q ss_conf 982470289980-8997887-66-87864019999999999999961128999994657656772044420114898476
Q gi|254780186|r 33 VRIDHFGMSLAL-EDGTVYS-VG-ESEFLFSIQSISKVFLLTIALRKFDEEIWKRVGREPSGSSFDSIVQLENENGIPRN 109 (311)
Q Consensus 33 vdp~~fgiai~t-~dG~~~~-~G-D~~~~FsiqSisK~f~l~~al~~~G~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~N 109 (311)
++..+-++.+++ .+|++.. ++ -+...|+.-|+-|||+++.||+..- -+....++.--.........+-
T Consensus 14 ~~~~~~~~v~~d~~tG~ila~~~n~a~~~~~pGStfK~~t~~aal~~g~---------~~~~~~~~~~~~~~~~~~~~~~ 84 (246)
T 1k55_A 14 AEAVNGVFVLCKSSSKSCATNDLARASKEYLPASTFXIPNAIIGLETGV---------IKNEHQVFKWDGKPRAMKQWER 84 (246)
T ss_dssp TTTCCEEEEEEESSTTSEEESCHHHHTCCBCCGGGGHHHHHHHHHHTTS---------SCSTTCEECCCSCCCSSGGGSS
T ss_pred HCCCCEEEEEEECCCCCEEEECHHHHHCCCCCCCHHHHHHHHHHHHCCC---------CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 5279468999989999687417646517889964799999999998499---------8997754048981334574189
Q ss_pred CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 31113799999864488888999999999999872899862478999985112412799999998278888998999999
Q gi|254780186|r 110 PFVNAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDVLKF 189 (311)
Q Consensus 110 PmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~ 189 (311)
++--..||.-+ . .-.|.++. +++ |. ..+..+++.+|.-..+..+.+..
T Consensus 85 ~~~~~~Al~~S-------~-N~~~~~l~---~~l-G~--------------------~~~~~~~~~~G~~~~~~~~~~~~ 132 (246)
T 1k55_A 85 DLTLRGAIQVS-------A-VPVFQQIA---REV-GE--------------------VRMQKYLKKFSYGNQNISGGIDK 132 (246)
T ss_dssp CEEHHHHHHTT-------C-HHHHHHHH---HHH-CH--------------------HHHHHHHHHTTCTTCCCCSCTTT
T ss_pred CCCHHHHHHHC-------C-CHHHHHHH---HHH-CC--------------------HHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 98999999975-------8-09999999---982-94--------------------67899999879999878998773
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCE-----E
Q ss_conf 99873000079999999999825970777887551899997755445411331256678987078715652211-----0
Q gi|254780186|r 190 YFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFPGKSGVGGG-----I 264 (311)
Q Consensus 190 Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlPaKSGVgGg-----i 264 (311)
....=...+|..+++.+.+++||+|+ ..+|..++.+...+-+. .+.... ....-+-+|+|-+.. .
T Consensus 133 ~~~~~~~~~tp~~~a~a~~~ian~G~-------~~~p~~~~~i~d~~~~~-~~~~~~--~~~~~~~gKTGT~~~~~~~~f 202 (246)
T 1k55_A 133 FWLEGQLRISAVNQVEFLESLYLNKL-------SASKENQLIVKEALVTE-AAPEYL--VHSKTGFSGVGTESNPGVAWW 202 (246)
T ss_dssp TTTTSSCCBCHHHHHHHHHHHHTTCS-------SSCHHHHHHHHHHTEEE-EETTEE--EEEEEEECCCCCSSSCEEEEE
T ss_pred CHHCCCCCCCHHHHHHHHHHHHCCCC-------CCCHHHHHHHHHHHHHH-HHHCEE--EEEEEEECEECCCCCCCCEEE
T ss_conf 02149855379999999999975997-------66488999999999998-861857--999982032268899864899
Q ss_pred EEEEC---CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 33437---8517998753207789848999999999999486
Q gi|254780186|r 265 LAIVP---SKASIAVWSPGLDNSGNSLLGAKALELLAIRTGW 303 (311)
Q Consensus 265 lavvP---g~~gIav~SP~LD~~GNSv~G~~~le~ls~~l~l 303 (311)
++..| .+..+++|-..=+..|-++++-.+-+.+.+.+.+
T Consensus 203 vG~~p~~~p~~~~~v~v~~~~~~g~~~a~~i~~~i~~~~~~l 244 (246)
T 1k55_A 203 VGWVEKETEVYFFAFNMDIDNESKLPLRKSIPTKIMESEGII 244 (246)
T ss_dssp EEEEEETTEEEEEEEEEEESCGGGTTHHHHHHHHHHHHTTCC
T ss_pred EEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 999887998599999997699886488999999999972661
No 15
>>2v2f_F Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc6_B* 2zc5_B* 2c6w_B 2c5w_B* (F:)
Probab=95.12 E-value=0.15 Score=30.47 Aligned_cols=108 Identities=16% Similarity=0.131 Sum_probs=70.7
Q ss_pred HHHHHCCHHHHHHHHHHHHCCCCCC-------------------CCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHC
Q ss_conf 7300007999999999982597077-------------------788755189999775544541133125667898707
Q gi|254780186|r 193 QCSLMMNCVQLAKSGLYLAFRGYNS-------------------LTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVG 253 (311)
Q Consensus 193 ~Csi~~t~~dLA~~~a~LAn~G~~P-------------------~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VG 253 (311)
+=..++|..+||.+.++|||+|+-. ...+|+++++.+..++.+|..--- +..+.-+...|
T Consensus 210 ~g~~~vtplqla~aya~ian~G~~~~P~~i~~i~d~~g~~~~~~~~~~~~~~~~~a~~~~~~l~~vv~-~g~~~~~~~~~ 288 (390)
T 2v2f_F 210 NKQYGASSEKMAAAYAAFANGGIYHKPMYINKVVFSDGSKKEFSDVGTRAMKETTAYMMTEMMKTVLA-YGTGRGAYLPW 288 (390)
T ss_dssp CTTSSCCHHHHHHHHHHHHTTSEECCCBCEEEEEETTSCEEECCCCCEECSCHHHHHHHHHHHHHHHH-TSTTGGGCCTT
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCEECCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCCC
T ss_conf 86414589999998764417973541354023333323321012232346889999999998754221-24542013689
Q ss_pred C--CCCCCCCC-------------------EEEEEECCCCEEEEECC------CCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 8--71565221-------------------10334378517998753------2077898489999999999994
Q gi|254780186|r 254 F--PGKSGVGG-------------------GILAIVPSKASIAVWSP------GLDNSGNSLLGAKALELLAIRT 301 (311)
Q Consensus 254 l--PaKSGVgG-------------------gilavvPg~~gIav~SP------~LD~~GNSv~G~~~le~ls~~l 301 (311)
. -+|+|-+- +....--.++.++||-. ..+..|...++-.+-+.+.+-+
T Consensus 289 ~~vaGKTGTa~~~~~~~~~~~~~~~~~~f~~~~~~~~p~~~~~v~v~~~~~~~~~~~~G~~~a~pi~~~i~~~~~ 363 (390)
T 2v2f_F 289 LAQAGKTGTSNYTDDEIEKHIKNTGYVAPDEMFVGYTRKYSMAVWTGYSNRLTPIVGDGFLVAAKVYRSMITYLS 363 (390)
T ss_dssp SCCEEEEEECCCCC-----------CCBSEEEEEEECSSEEEEEEEECSSTTSCBCGGGGGHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 525557257566666644334556666663599985798799999930788887588740789999999999996
No 16
>>3equ_A PBP-2, penicillin-binding protein 2; class B transpeptidase, cell division, cell inner membrane, cell membrane, cell shape; HET: SEP; 2.40A {Neisseria gonorrhoeae} PDB: 3eqv_A* (A:259-445)
Probab=94.25 E-value=0.064 Score=32.87 Aligned_cols=150 Identities=14% Similarity=0.042 Sum_probs=83.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHCC---HHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHH------HHHCCCC
Q ss_conf 6401999999999999996112---899999465765677204442011489847631113799999------8644888
Q gi|254780186|r 57 FLFSIQSISKVFLLTIALRKFD---EEIWKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVS------DAVLGSS 127 (311)
Q Consensus 57 ~~FsiqSisK~f~l~~al~~~G---~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~------sli~~~~ 127 (311)
..|+--|+-|||+++.|||..- +.++..-+..+.+. .......+.+.-=..|+..+ .+.. +.
T Consensus 7 ~~~~PGSTfKp~t~~aaLe~G~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~l~~al~~S~N~~f~~l~~-~~ 77 (187)
T 3equ_A 7 DXIEPGSAIKPFVIAKALDAGKTDLNERLNTQPYKIGPS--------PVRDTHVYPSLDVRGIXQKSSNVGTSKLSA-RF 77 (187)
T ss_dssp CCBCCGGGGHHHHHHHHHHHTSSCTTCEEECCCEEETTE--------EECCSSCCSEEEHHHHHHHTCHHHHHHHHT-TS
T ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCC--------CCCCCCCCCCCCHHHHHHHCCCCCCHHHHH-HC
T ss_conf 553665433521111001258743220110112222211--------122346767322999866056630013234-32
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH----HHHHHCCHHHH
Q ss_conf 88999999999999872899862478999985112412799999998278888998999999998----73000079999
Q gi|254780186|r 128 SADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDVLKFYFH----QCSLMMNCVQL 203 (311)
Q Consensus 128 ~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~----~Csi~~t~~dL 203 (311)
.. +++.+.++++--+.++.++..- +..-+..++....+.+.. +=++.+|.-+|
T Consensus 78 g~----~~~~~~~~~~G~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~g~~~~~tpl~l 134 (187)
T 3equ_A 78 GA----EEXYDFYHELGIGVRXHSGFPG-------------------ETAGLLRNWRRWRPIEQATXSFGYGLQLSLLQL 134 (187)
T ss_dssp CH----HHHHHHHHHTTTTSCCCCSCTT-------------------CCCCBCCCGGGCCHHHHHHHHTTCSCBBCHHHH
T ss_pred CC----HHHHHHHHHCCCCCCCCCCCCC-------------------CCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHH
T ss_conf 82----7789999874964236889986-------------------311255552235630012212577756788999
Q ss_pred HHHHHHHHCCCCCC----------CCCCEECCHHHHHHHHHHHHH
Q ss_conf 99999982597077----------788755189999775544541
Q gi|254780186|r 204 AKSGLYLAFRGYNS----------LTNQSVISPLQSRCVNAVMLT 238 (311)
Q Consensus 204 A~~~a~LAn~G~~P----------~t~~~vi~~~~~~~v~s~M~T 238 (311)
|.+.+++||+|+-. ..++|+++++++..++.+|..
T Consensus 135 a~~~atiAn~G~~~~p~~i~~v~~~~g~~v~s~~~a~~l~~~l~~ 179 (187)
T 3equ_A 135 ARAYTALTHDGVLLPLSFEKQAVAPQGKRIFKEXTAREVRNLXVS 179 (187)
T ss_dssp HHHHHHHHTTTEECCCBSBCCSSCCCCEECSCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 765520024770333101001457767523347789999989985
No 17
>>1k38_A Penicillinase, beta-lactamase OXA-2; serine beta-lactamase, hydrolase, antibiotic resistance, carbamylated lysine; HET: KCX; 1.50A {Salmonella typhimurium} (A:)
Probab=93.80 E-value=0.12 Score=31.17 Aligned_cols=208 Identities=13% Similarity=-0.044 Sum_probs=112.5
Q ss_pred EEEEEEC-CCCEE-EECC---CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHH
Q ss_conf 2899808-99788-7668---78640199999999999999611289999946576567720444201148984763111
Q gi|254780186|r 39 GMSLALE-DGTVY-SVGE---SEFLFSIQSISKVFLLTIALRKFDEEIWKRVGREPSGSSFDSIVQLENENGIPRNPFVN 113 (311)
Q Consensus 39 giai~t~-dG~~~-~~GD---~~~~FsiqSisK~f~l~~al~~~G~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiN 113 (311)
++.+... +|++. -+|+ +...|+.-|+-|||+++.||+..- -+...-|+.--.......+.+.++-=
T Consensus 22 ~~v~~~~~tg~i~a~~~~~n~a~~~~~pGStfKp~~~aaAl~~g~---------~~~~~~~~~~~~~~~~~~~~~g~itl 92 (254)
T 1k38_A 22 TIVVADERQADRAMLVFDPVRSKKRYSPASTFXIPHTLFALDAGA---------VRDEFQIFRWDGVNRGFAGHNQDQDL 92 (254)
T ss_dssp EEEEEECSSSSCCCEEESHHHHTCCBCCGGGGHHHHHHHHHHHTS---------CCSTTCCBCCCSCCCSCTTTSSCBCH
T ss_pred EEEEEECCCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHCCC---------CCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 999998999977887319888668779971899999999998699---------66774034799866478888998499
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 37999998644888889999999999998728998624789999851124127999999982788889989999999987
Q gi|254780186|r 114 AGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDVLKFYFHQ 193 (311)
Q Consensus 114 AGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~~ 193 (311)
..|+.-++= -.| .+..+++ |.+ .+..+++.+|.-.....+......-+
T Consensus 93 ~~Al~~S~N--------~~~---~~l~~~l-G~~--------------------~~~~~~~~~G~~~~~~~~~~~~~~~~ 140 (254)
T 1k38_A 93 RSAMRNSTV--------WVY---ELFAKEI-GDD--------------------KARRYLKKIDYGNADPSTSNGDYWIE 140 (254)
T ss_dssp HHHHHTTCH--------HHH---HHHHHHH-CHH--------------------HHHHHHHHTTCTTCCCCC--CCTTTT
T ss_pred HHHHHHCCH--------HHH---HHHHHHC-CHH--------------------HHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 999997496--------999---9999973-928--------------------89999997799999888775541027
Q ss_pred HHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC---EEEEEECC
Q ss_conf 300007999999999982597077788755189999775544541133125667898707871565221---10334378
Q gi|254780186|r 194 CSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFPGKSGVGG---GILAIVPS 270 (311)
Q Consensus 194 Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlPaKSGVgG---gilavvPg 270 (311)
=++.+|..+||.+.+++||+|+ .+++..++.+...|-.- .++ ...+-+|+|.+- -.++-.|.
T Consensus 141 g~~~~tp~~ma~~~~~ian~G~-------~~~p~~v~~i~d~~~~~-~~~-------~~~~~gktGTa~~~~wf~G~~p~ 205 (254)
T 1k38_A 141 GSLAISAQEQIAFLRKLYRNEL-------PFRVEHQRLVKDLMIVE-AGR-------NWILRAKTGWEGRMGWWVGWVEW 205 (254)
T ss_dssp SSCCBCHHHHHHHHHHHHTTCS-------SSCHHHHHHHHHHTEEE-EET-------TEEEEEEEEESSSEEEEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHCCCC-------CCCHHHHHHHHHHHHHH-HHC-------CCCCCCEECCCCCCEEEEEEEEC
T ss_conf 8753669999999999985992-------27867999999999886-625-------87775620268875689999977
Q ss_pred ---CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf ---51799875320778984899999999999948
Q gi|254780186|r 271 ---KASIAVWSPGLDNSGNSLLGAKALELLAIRTG 302 (311)
Q Consensus 271 ---~~gIav~SP~LD~~GNSv~G~~~le~ls~~l~ 302 (311)
+.-+++|-..=+..-.+.....+.+.+-+.+.
T Consensus 206 ~~~~~~~~v~v~~~~~~~g~~~a~~i~~~il~~l~ 240 (254)
T 1k38_A 206 PTGSVFFALNIDTPNRMDDLFKREAIVRAILRSIE 240 (254)
T ss_dssp TTEEEEEEEEEECTTGGGGTHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 99869999999779986627899999999999758
No 18
>>3isg_A Penicillinase, beta-lactamase OXA-1; hydrolase, lysine carboxylation, antibiotic resistance, plasmid, transposable element; HET: KCX DRW; 1.40A {Escherichia coli} PDB: 1m6k_A* (A:)
Probab=93.26 E-value=0.37 Score=27.93 Aligned_cols=218 Identities=9% Similarity=-0.062 Sum_probs=111.4
Q ss_pred HHCEEEEEE-CCCCEE---EECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 470289980-899788---7668786401999999999999996112899999465765677204442011489847631
Q gi|254780186|r 36 DHFGMSLAL-EDGTVY---SVGESEFLFSIQSISKVFLLTIALRKFDEEIWKRVGREPSGSSFDSIVQLENENGIPRNPF 111 (311)
Q Consensus 36 ~~fgiai~t-~dG~~~---~~GD~~~~FsiqSisK~f~l~~al~~~G~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPm 111 (311)
.+-++.+.+ .+|++. +-.+++..|+--|+-|||+++.+|+... -+....|+.- .-....++.+-++
T Consensus 15 ~~ga~vv~d~~tG~Vla~~~~~~~~~~~~PGStfK~~t~~~aLe~g~---------~~~~~~~~~~-~~~~~~~~~~g~~ 84 (251)
T 3isg_A 15 TEGCFLLYDASTNAEIAQFNKAKCATQMAPDSTFXIALSLMAFDAEI---------IDQKTIFKWD-KTPKGMEIWNSNH 84 (251)
T ss_dssp EEEEEEEEETTTCCEEEEECHHHHTCCBCCGGGHHHHHHHHHHHTTS---------CCTTCCBCCC-SSCCSSGGGSSCB
T ss_pred CCEEEEEEECCCCCCHHCCCHHHHCCCCCCCCHHHHHHHHHHHHCCC---------CCCCCCCCCC-CCCCCCCCCCCCC
T ss_conf 64069999789998400107676367879974899999999998699---------7897544325-7655688556666
Q ss_pred HHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 1137999998644888-889999999999998728998624789999851124127999999982788889989999999
Q gi|254780186|r 112 VNAGAIVVSDAVLGSS-SADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDVLKFY 190 (311)
Q Consensus 112 iNAGAI~~~sli~~~~-~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Y 190 (311)
-=..|+..++-+.-.. ..+--.+++.++++++=-+.+..++- +.+ ..-....
T Consensus 85 ~l~~Al~~S~N~~~~~l~~~~g~~~~~~~~~~~G~~~~~~~~~--------------------------~~~-~~~~~~~ 137 (251)
T 3isg_A 85 TPKTWMQFSVVWVSQEITQKIGLNKIKNYLKDFDYGNQDFSGD--------------------------KER-NNGLTEA 137 (251)
T ss_dssp CHHHHHHTTCHHHHHHHHHHHCHHHHHHHHHHTTCTTCCCCCC----------------------------C-CCHHHHT
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC--------------------------CCC-CCCCCCH
T ss_conf 6899998557288887743024201456887468988888876--------------------------543-2333342
Q ss_pred HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCE-----EE
Q ss_conf 9873000079999999999825970777887551899997755445411331256678987078715652211-----03
Q gi|254780186|r 191 FHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFPGKSGVGGG-----IL 265 (311)
Q Consensus 191 f~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlPaKSGVgGg-----il 265 (311)
.-+-++.+|..++|.+.++|||+|+ .+++..++.+...|-.-- +......+.++ -.|.|.... .+
T Consensus 138 ~~~~~~~vspl~~a~~~~~ian~G~-------~~~p~~v~~v~~~~~~~~-~~~~~~~~~k~--~~k~g~~~~~~~~wfv 207 (251)
T 3isg_A 138 WLESSLKISPEEQIQFLRKIINHNL-------PVKNSAIENTIENMYLQD-LDNSTKLYGKT--GAGFTANRTLQNGWFE 207 (251)
T ss_dssp TSSSSCCBCHHHHHHHHHHHHTTCS-------SSCHHHHHHHHHHTEEEE-CTTSCEEEEEE--EEEECTTSSCEEEEEE
T ss_pred HHCCCCEECHHHHHHHHHHHHHCCC-------CCCHHHHHHHHHHHHHHE-ECCCCCCCCCC--CCCCCCCCCCCEEEEE
T ss_conf 4328600118999999999973687-------774789999999876532-32784341202--4453689998549999
Q ss_pred EEECCC---CEEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 343785---17998753207789848999999999999
Q gi|254780186|r 266 AIVPSK---ASIAVWSPGLDNSGNSLLGAKALELLAIR 300 (311)
Q Consensus 266 avvPg~---~gIav~SP~LD~~GNSv~G~~~le~ls~~ 300 (311)
+..|.. ..+.+.-+.-...|.+.++..+-+.+.+-
T Consensus 208 G~~p~~~~~~~v~v~~~~~~~~g~~~a~~i~~~i~~~~ 245 (251)
T 3isg_A 208 GFIISKSGHKYVFVSALTGNLGSNLTSSIKAKKNAITI 245 (251)
T ss_dssp EEEECTTCCEEEEEEEEEECCTTSCCHHHHHHHHHHHH
T ss_pred EEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 98883899899999998089877731379999999999
No 19
>>1w5d_A Penicillin-binding protein; D-Ala-D-Ala-carboxypeptidase, peptidoglycan, beta-lactam, hydrolase, peptidoglycan synthesis; 2.1A {Bacillus subtilis} (A:1-68,A:290-462)
Probab=90.79 E-value=0.082 Score=32.16 Aligned_cols=52 Identities=15% Similarity=0.174 Sum_probs=43.2
Q ss_pred CCHHHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 98247028998089-97887668786401999999999999996112899999
Q gi|254780186|r 33 VRIDHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFDEEIWKR 84 (311)
Q Consensus 33 vdp~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~~V~~~ 84 (311)
.....+|+.|.+.+ |++.-.=+.+++|+--|+.|+|+-..||+.+|+++.+.
T Consensus 21 ~~~~~~~~~v~d~~~g~~~~~~~~~~~~~pAS~~K~~t~~~al~~lg~ell~~ 73 (241)
T 1w5d_A 21 LEGAMAGITVRSAETGAVLYEHSGDTRMRPASSLKLLTAAAALSVLGEKLFVP 73 (241)
T ss_dssp GTTCEEEEEEEETTTCCEEEEESTTSCBCCGGGGHHHHHHHHHHHHCTHHHHH
T ss_pred CCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 56876999999899998965507998758679999999999998529999999
No 20
>>1nrf_A Regulatory protein BLAR1; penicillin-receptor, beta-lactamase induction, penicillin-binding protein, membrane protein; 2.50A {Bacillus licheniformis} (A:54-187)
Probab=88.45 E-value=0.61 Score=26.51 Aligned_cols=130 Identities=16% Similarity=-0.003 Sum_probs=67.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 64019999999999999961128999994657656772044420114898476311137999998644888889999999
Q gi|254780186|r 57 FLFSIQSISKVFLLTIALRKFDEEIWKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENF 136 (311)
Q Consensus 57 ~~FsiqSisK~f~l~~al~~~G~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i 136 (311)
..|+.-|+-|||+++.||+... -+....|+.--...+..+..+.++-=..|++.++=+ .|-++
T Consensus 4 ~~~~pGStfK~~~~~aale~g~---------~~~~~~~~~~~~~~~~~~~~~g~~tl~~al~~S~N~--------~f~~l 66 (134)
T 1nrf_A 4 SRFAPASTYKVFSALLALESGI---------ITKNDSHMTWDGTQYPYKEWNQDQDLFSAMSSSTTW--------YFQKL 66 (134)
T ss_dssp SCBCCGGGGHHHHHHHHHHHTS---------SCSSCCCBCCCCCCCSSTTTSSCBCHHHHHHHTCHH--------HHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHCCC---------CCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCEEH--------HHHHH
T ss_conf 8879963599999999997699---------999886775798423788889985999999872049--------98764
Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
Q ss_conf 99999872899862478999985112412799999998278888998999999998730000799999999998259707
Q gi|254780186|r 137 LNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYN 216 (311)
Q Consensus 137 ~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~ 216 (311)
. .++ | .+ .+..+++..|.=.. ....+...+-+=.+.+|..+||.+.+++||+|+
T Consensus 67 ~---~~l-g-----~~---------------~~~~~~~~~g~~~~-~~~~~~~~~~~g~~~vsp~~la~~~a~~an~G~- 120 (134)
T 1nrf_A 67 D---RQI-G-----ED---------------HLRHYLKSIHYGNE-DFSVPADYWLDGSLQISPLEQVNILKKFYDNEF- 120 (134)
T ss_dssp H---HHH-C-----HH---------------HHHHHHHHTTCTTC-CCSCTTTTTTSSSSCBCHHHHHHHHHHHHHTTT-
T ss_pred H---HHC-C-----CH---------------HHHHHHHHHCCCCC-CCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCC-
T ss_conf 4---540-3-----25---------------79999999388998-888711787478745569999999999971998-
Q ss_pred CCCCCEECCHHHHHHHHHH
Q ss_conf 7788755189999775544
Q gi|254780186|r 217 SLTNQSVISPLQSRCVNAV 235 (311)
Q Consensus 217 P~t~~~vi~~~~~~~v~s~ 235 (311)
.++|..++.|..-
T Consensus 121 ------~~~P~~v~~i~da 133 (134)
T 1nrf_A 121 ------DFKQSNIETVKDS 133 (134)
T ss_dssp ------CCCHHHHHHHHHH
T ss_pred ------CCCHHHHHHHHHH
T ss_conf ------7784799987634
No 21
>>2iwb_A Methicillin resistance MECR1 protein; antibiotic resistance, bacterial antibiotic resistance, methicillin resistance, beta-lactamic antibiotics, MRSA; 1.8A {Staphylococcus aureus} PDB: 2iwc_A* 2iwd_A* (A:)
Probab=88.35 E-value=0.12 Score=31.15 Aligned_cols=210 Identities=12% Similarity=0.003 Sum_probs=114.3
Q ss_pred CCHHHCEEEEEEC-CCCEEEEC--CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCC
Q ss_conf 9824702899808-99788766--87864019999999999999961128999994657656772044420114898476
Q gi|254780186|r 33 VRIDHFGMSLALE-DGTVYSVG--ESEFLFSIQSISKVFLLTIALRKFDEEIWKRVGREPSGSSFDSIVQLENENGIPRN 109 (311)
Q Consensus 33 vdp~~fgiai~t~-dG~~~~~G--D~~~~FsiqSisK~f~l~~al~~~G~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~N 109 (311)
++...-++.+..+ .|++.... +...+|+.-|.-|||+++.||+... -+....|+...........-+.
T Consensus 19 ~~~~~g~~vv~d~~TG~IlA~~~~~~~~~~~pGStfK~~~~~aal~~g~---------~~~~~~~~~~~~~~~~~~~~~~ 89 (246)
T 2iwb_A 19 FKGFDGSFVLYNEREQAYSIYNEPESKQRYSPNSTYKIYLALMAFDQNL---------LSLNHTEQQWDKHQYPFKEWNQ 89 (246)
T ss_dssp GTTSEEEEEEEETTTTEEEEESHHHHTBCBCCGGGGHHHHHHHHHHTTS---------SBTTBCCBCCCCCCCSSGGGSS
T ss_pred HCCCCEEEEEEECCCCCEEEECHHHHCCCCCCCCHHHHHHHHHHHHCCC---------CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 1787167999988999787378889668779966899999999998599---------7864345557865666667777
Q ss_pred CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 31113799999864488888999999999999872899862478999985112412799999998278888998999999
Q gi|254780186|r 110 PFVNAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDVLKF 189 (311)
Q Consensus 110 PmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~ 189 (311)
++-=..|+..++= -.|. +++ .++..++ +.-+++.+|.-.. -...++.
T Consensus 90 ~~tl~~Al~~S~N--------~~~~-------~l~--~~lG~~~---------------~~~~~~~~G~~~~-~~~~~~~ 136 (246)
T 2iwb_A 90 DQNLNSSMKYSVN--------WYYE-------NLN--KHLRQDE---------------VKSYLDLIEYGNE-EISGNEN 136 (246)
T ss_dssp CBCHHHHHHTTCH--------HHHH-------HHH--TTSCHHH---------------HHHHHHHHTCTTC-CCCSCSS
T ss_pred CEEHHHHHHHHCC--------HHHH-------HHH--HHCCCHH---------------HHHHHHHCCCCCC-CCCCCCC
T ss_conf 1256655563032--------9999-------987--7528458---------------9999997078988-8898873
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC-------
Q ss_conf 9987300007999999999982597077788755189999775544541133125667898707871565221-------
Q gi|254780186|r 190 YFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFPGKSGVGG------- 262 (311)
Q Consensus 190 Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlPaKSGVgG------- 262 (311)
.+-+-.+.+|..+++.+.+++||+|. .++|..++.+...|-...-+. .++++|.|-|-
T Consensus 137 ~~~~~~~~~sp~~~a~~~~~ia~~G~-------~~~p~~~~~~~~~~~~~~~~~--------~~~~~ktgTgt~~~~~~~ 201 (246)
T 2iwb_A 137 YWNESSLKISAIEQVNLLKNMKQHNM-------HFDNKAIEKVENSMTLKQKDT--------YKYVGKTGTGIVNHKEAN 201 (246)
T ss_dssp TTSSSSCCBCHHHHHHHHHHHHTTCS-------SSCHHHHHHHHHHTEEEECSS--------EEEEEEEEEEEETTEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCC-------CCCHHHHHHHHHHHHHHEECC--------CCCCCCCCCCEECCCCCC
T ss_conf 23588653569999999999961478-------888889998862112320057--------310014453461898878
Q ss_pred -EEEEEECC---CCEEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf -10334378---517998753207789848999999999999
Q gi|254780186|r 263 -GILAIVPS---KASIAVWSPGLDNSGNSLLGAKALELLAIR 300 (311)
Q Consensus 263 -gilavvPg---~~gIav~SP~LD~~GNSv~G~~~le~ls~~ 300 (311)
-.++-.|+ +..+++|--.=|..|.+.++--+- .+.++
T Consensus 202 ~wf~G~~p~~~p~~~~~v~v~~~~~~g~~~a~~i~~-~i~~~ 242 (246)
T 2iwb_A 202 GWFVGYVETKDNTYYFATHLKGEDNANGEKAQQISE-RILKE 242 (246)
T ss_dssp EEEEEEEEESSCEEEEEEEEECSSCBCHHHHHHHHH-HHHHH
T ss_pred EEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHH-HHHHH
T ss_conf 899999985998399999997899887278999999-99997
No 22
>>1bue_A Protein (imipenem-hydrolysing beta-lactamase); hydrolase, antibiotic resistance, class A carbapenemase; 1.64A {Enterobacter cloacae} (A:)
Probab=84.79 E-value=0.37 Score=27.91 Aligned_cols=169 Identities=14% Similarity=0.001 Sum_probs=81.9
Q ss_pred CHHHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCH
Q ss_conf 8247028998089-978876687864019999999999999961128999994657656772044420114898476311
Q gi|254780186|r 34 RIDHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFDEEIWKRVGREPSGSSFDSIVQLENENGIPRNPFV 112 (311)
Q Consensus 34 dp~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmi 112 (311)
-+-.+++++.+.+ |+++... .+.+|+.-|++|++++..+++...+. -..++.+-..+..-++
T Consensus 15 ~~~~~s~~v~d~~tg~~~~~n-~d~~~~~AS~~Kl~~~~~~l~~~~~g----------------~l~l~~~i~~~~~~~~ 77 (265)
T 1bue_A 15 FNGRIGVYALDTGSGKSFSYR-ANERFPLCSSFKGFLAAAVLKGSQDN----------------RLNLNQIVNYNTRSLE 77 (265)
T ss_dssp HTSEEEEEEEETTTCCEEEES-TTSCEECGGGGHHHHHHHHHHHHHTT----------------SSCTTCEECCTTSCCC
T ss_pred CCCEEEEEEEECCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHHHHHCC----------------CCCCCCEEEEECCCCC
T ss_conf 498699999989999888988-99844527899999999999974538----------------8777853998413234
Q ss_pred HHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHCCCCCCCCHHHHH--HHHCCCHH---HHHHHHHHHHCCCCCCCHHHH
Q ss_conf 137999998644888-889999999999998728998624789999--85112412---799999998278888998999
Q gi|254780186|r 113 NAGAIVVSDAVLGSS-SADDAIENFLNFMRGIAGDASIHIDSVVAN--SEIETGYR---NFALANFVRSYGNIRYKIEDV 186 (311)
Q Consensus 113 NAGAI~~~sli~~~~-~~~~~~~~i~~~~~~lag~~~i~~d~~v~~--SE~~t~~r---N~ala~~Lk~~g~~~~dv~~~ 186 (311)
-.|.+..- ..+.. +..+ ++..+-..++ +.... -++-.+.+ +..+-.+-++.+.........
T Consensus 78 ~~~~~~~~--~~g~~~t~~d----ll~~mi~~Sd-------N~A~~~L~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (265)
T 1bue_A 78 FHSPITTK--YKDNGMSLGD----MAAAALQYSD-------NGATNIILERYIGGPEGMTKFMRSIGDEDFRLDRWELDL 144 (265)
T ss_dssp SSCHHHHH--TTTTCEEHHH----HHHHHHHSCC-------HHHHHHHHHHTTCHHHHHHHHHHHTTCSSCBCCSCTTGG
T ss_pred CCCCCEEC--CCCCCEEHHH----HHHHHHHHCC-------CHHHHHHHHHHCCCCHHHHHHHHHHCHHHCCCCCCCCCC
T ss_conf 79975012--6897245999----9999998267-------199999999860110059999998133441255566644
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCC
Q ss_conf 999998730000799999999998259707778875518999977554454113
Q gi|254780186|r 187 LKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCG 240 (311)
Q Consensus 187 Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcG 240 (311)
....-....-..|+.|++++..-|.. ...+++.........|...-
T Consensus 145 ~~~~~~~~~n~tTa~d~~~ll~~l~~--------~~~~~~~~~~~~~~~~~~~~ 190 (265)
T 1bue_A 145 NTAIPGDERDTSTPAAVAKSLKTLAL--------GNILSEHEKETYQTWLKGNT 190 (265)
T ss_dssp GCCCTTCCTTEECHHHHHHHHHHHHH--------SSSSCHHHHHHHHHHHHTCS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHH--------CCCCCHHHHHHHHHHHHCCC
T ss_conf 57899986675499999999999984--------77667889999999984576
No 23
>>1n9b_A Penicillinase, beta-lactamase SHV-2; beta-lactam hydrolase, detergent binding, drug design, radiation damage; HET: MA4 EPE; 0.90A {Klebsiella pneumoniae} (A:)
Probab=84.33 E-value=0.46 Score=27.29 Aligned_cols=43 Identities=23% Similarity=0.214 Sum_probs=35.5
Q ss_pred HHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 47028998089-97887668786401999999999999996112
Q gi|254780186|r 36 DHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFD 78 (311)
Q Consensus 36 ~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G 78 (311)
-..|+.+.+.+ |++.-.-+.+.+|+..|+.|+++..+++++..
T Consensus 17 ~~~s~~v~dl~tg~~l~~~n~d~~~~~AS~~Kl~~~~~~l~~i~ 60 (265)
T 1n9b_A 17 GRVGMIEMDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVD 60 (265)
T ss_dssp SEEEEEEEETTTCCEEEEESTTSCEECGGGHHHHHHHHHHHHHH
T ss_pred CEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 86999999999994833588899615678999999999998612
No 24
>>2wk0_A Beta-lactamase; hydrolase, iodopenicillanate, antibiotic resistance; HET: BIY CIT; 1.65A {Bacillus licheniformis} PDB: 3b3x_A* 1i2s_A* 1i2w_A* 2blm_A 4blm_A 1mbl_A (A:)
Probab=82.90 E-value=0.59 Score=26.61 Aligned_cols=227 Identities=12% Similarity=0.046 Sum_probs=101.5
Q ss_pred CCHHHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCH-HHHHHHCCCCCCCCC-HHHHHHHCCCCCCCC
Q ss_conf 98247028998089-978876687864019999999999999961128-999994657656772-044420114898476
Q gi|254780186|r 33 VRIDHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFDE-EIWKRVGREPSGSSF-DSIVQLENENGIPRN 109 (311)
Q Consensus 33 vdp~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~-~V~~~VG~ePSg~~F-NSi~~Le~~~g~P~N 109 (311)
--+...++.+.+.+ |+++... .+.+|+.-|+.|++++.++++...+ ++-..+-...+...- .++..+......+..
T Consensus 14 ~~~~~~s~~v~d~~tg~~~~~n-~d~~~~~AS~~Kl~~~~~~~~~v~~g~l~~~~~i~~~~~~~~~~~~~~~~g~~~t~~ 92 (265)
T 2wk0_A 14 QFDAKLGIFALDTGTNRTVTYR-PDERFAFASTIKALTVGVLLQQKSIEDLNQRITYTRDDLVNYNPITEKHVDTGMTLK 92 (265)
T ss_dssp HHTCEEEEEEEETTTCCEEEES-TTCEEECGGGHHHHHHHHHHHHCCTGGGGCEECCCTTTCCSCCTTGGGCTTTCEEHH
T ss_pred HCCCEEEEEEEECCCCCEEEEC-CCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHCCCCCCCCCCCCCCCCCHH
T ss_conf 7198699999989999889987-996460387999999999999705467775267447861578985003688851299
Q ss_pred CCHH-----HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC-CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCH
Q ss_conf 3111-----37999998644888889999999999998728-99862478999985112412799999998278888998
Q gi|254780186|r 110 PFVN-----AGAIVVSDAVLGSSSADDAIENFLNFMRGIAG-DASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKI 183 (311)
Q Consensus 110 PmiN-----AGAI~~~sli~~~~~~~~~~~~i~~~~~~lag-~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv 183 (311)
.++. +.-.++-.|+. ...... .+-.|++..-. ...+......+.+..
T Consensus 93 ~ll~~m~~~SdN~A~~~L~~-~~g~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~----------------------- 145 (265)
T 2wk0_A 93 ELADASLRYSDNTAQNLILK-QIGGPE---SLKKELRKIGDEVTNPERFEPELNEVN----------------------- 145 (265)
T ss_dssp HHHHHHHHHCCHHHHHHHHH-HTTHHH---HHHHHHHHTTCCSCCCCCCTTGGGCCC-----------------------
T ss_pred HHHHHHHHCCCHHHHHHHHH-HHCCCH---HHHHHHHHCCHHHHHCCCCCCCCCCCC-----------------------
T ss_conf 99999885286399999999-967936---899999972445542034545344579-----------------------
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHC--CCCCCCCC
Q ss_conf 9999999987300007999999999982597077788755189999775544541133125667898707--87156522
Q gi|254780186|r 184 EDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVG--FPGKSGVG 261 (311)
Q Consensus 184 ~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VG--lPaKSGVg 261 (311)
.....-..|++|++++..-|..+ +.+++...+....+|...--...-..+....+ .=-|.|-.
T Consensus 146 -------~~~~~n~~Ta~~~~~ll~~l~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KtG~~ 210 (265)
T 2wk0_A 146 -------PGETQDTSTARALATSLQAFALE--------DKLPSEKRELLIDWMKRNTTGDALIRAGVPEGWEVADKTGAG 210 (265)
T ss_dssp -------TTCCTTEEEHHHHHHHHHHHHTS--------TTSCHHHHHHHHHHHHTCSSCTTTGGGGSCTTCEEEEEEEEE
T ss_pred -------CCCCCCCCCHHHHHHHHHHHHHC--------CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECC
T ss_conf -------99732342699999999999718--------764478899999998515443333333478775489977347
Q ss_pred ---C-EEEEEE--CC--CCEEEEECCCCCC-CCCCHHHHH-HHHHHHHHHC
Q ss_conf ---1-103343--78--5179987532077-898489999-9999999948
Q gi|254780186|r 262 ---G-GILAIV--PS--KASIAVWSPGLDN-SGNSLLGAK-ALELLAIRTG 302 (311)
Q Consensus 262 ---G-gilavv--Pg--~~gIav~SP~LD~-~GNSv~G~~-~le~ls~~l~ 302 (311)
| ..++++ |+ ...++++++.-.. ...+.+-+. +.+.+-+.++
T Consensus 211 ~~~~~~d~giv~~~~~~~~~vvl~~~~~~~~~~~~~~li~~i~~~~~~~~~ 261 (265)
T 2wk0_A 211 SYGTRNDIAIIWPPKGDPVVLAVLSSRDKKDAKYDDKLIAEATKVVVKALN 261 (265)
T ss_dssp TTTEEEEEEEEECSSSCCEEEEEEEECSSTTCCCCTHHHHHHHHHHHHHC-
T ss_pred CCCCEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 876378899999389988999999179998868899999999999999986
No 25
>>1alq_A CP254 beta-lactamase; hydrolase, circular permuted, antibiotic resistance; 1.80A {Staphylococcus aureus} (A:)
Probab=82.40 E-value=0.64 Score=26.38 Aligned_cols=57 Identities=23% Similarity=0.204 Sum_probs=45.7
Q ss_pred CCCCCCCHHHHCCCHHHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 99998283320598247028998089-97887668786401999999999999996112
Q gi|254780186|r 21 GRVADYIPELAKVRIDHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFD 78 (311)
Q Consensus 21 G~vA~YIP~La~vdp~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G 78 (311)
-.+..-|+++..--+...|+.+.+.| |+++... .+.+|+..|+.|+++...+++..-
T Consensus 43 ~~l~~~~~~~~~~~~~~~~~~v~d~~tg~~~~~n-~d~~~~~AS~~Kl~~~~~~l~~~~ 100 (266)
T 1alq_A 43 KNAAKELNDLEKKYNAHIGVYALDTKSGKEVKFN-SDKRFAYASTSKAINSAILLEQVP 100 (266)
T ss_dssp --CCCCHHHHHHHHTCEEEEEEEETTTCCEEEES-TTSCEECGGGHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEC-CCCEECCHHHHHHHHHHHHHHHHH
T ss_conf 2399999999998498699999999999888888-997062478999999999999852
No 26
>>3dw0_A Class A carbapenemase KPC-2; beta-lactamase, antibiotic resistance, hydrolase; 1.60A {Escherichia coli} (A:)
Probab=82.35 E-value=0.65 Score=26.34 Aligned_cols=65 Identities=17% Similarity=0.025 Sum_probs=43.9
Q ss_pred HHCCCHHHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--HH-HHHHHCCCCCCCCCH
Q ss_conf 20598247028998089-97887668786401999999999999996112--89-999946576567720
Q gi|254780186|r 30 LAKVRIDHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFD--EE-IWKRVGREPSGSSFD 95 (311)
Q Consensus 30 La~vdp~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G--~~-V~~~VG~ePSg~~FN 95 (311)
+.+-.....++.+.+.+ |+++... .+.+|+..|++|++++.++++... +. .-++|-..+.....+
T Consensus 36 ~~~~~~~~~s~~~~d~~tg~~~~~n-~d~~~~~AS~~Kl~~~~~~~~~~~~g~l~l~~~i~~~~~~~~~~ 104 (294)
T 3dw0_A 36 LEQDFGGSIGVYAMDTGSGATVSYR-AEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIRYGKNALVPW 104 (294)
T ss_dssp HHHHHTSEEEEEEEETTTCCEEEES-TTSCEECGGGHHHHHHHHHHHHHTTSTTCTTCEECCCGGGCCSS
T ss_pred HHHHCCCEEEEEEEECCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCC
T ss_conf 9986298599999999999885678-99707528899999999999998728988664424010125589
No 27
>>2qmi_A PBP related beta-lactamase; PAB87, octamer, LU-HPDO3A, archaea, hydrolase; HET: DO3; 2.20A {Pyrococcus abyssi} (A:1-351)
Probab=81.40 E-value=2.9 Score=22.11 Aligned_cols=83 Identities=18% Similarity=0.167 Sum_probs=45.5
Q ss_pred HHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCC-CCH----HHHHHHHH-----HCCCCCCC---C
Q ss_conf 30000799999999998259707778875518999977554454113-312----56678987-----07871565---2
Q gi|254780186|r 194 CSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCG-HYD----HSGDFAYR-----VGFPGKSG---V 260 (311)
Q Consensus 194 Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcG-mYd----~SG~fa~~-----VGlPaKSG---V 260 (311)
..+-.|+.||++.+..|.|++ .++++++..+....-...-. -+. +.--|... ..++.+.| -
T Consensus 235 g~~~st~~Dla~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~G~~~~~~~~~~~~~~~~G~~g~ 308 (351)
T 2qmi_A 235 GGLLSSVLDLAKYLKMYIERD------ESIVSKEYIEKMETSYIKVPWEIFGGEGYGYGLIIYPNFLGEKLVGHSGSVGM 308 (351)
T ss_dssp TCCEECHHHHHHHHHHHHTTC------CSSSCHHHHHHHTSCCEECSCCSSSCCEECSSSEEEEEETTEEEEEEEEECSS
T ss_pred CCCCCCHHHHHHHHHHHHHCC------CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCC
T ss_conf 321388999999999997189------98786999998744455788555776665310476037898624210698776
Q ss_pred CCEEEEEECCCC-EEEEECCCCC
Q ss_conf 211033437851-7998753207
Q gi|254780186|r 261 GGGILAIVPSKA-SIAVWSPGLD 282 (311)
Q Consensus 261 gGgilavvPg~~-gIav~SP~LD 282 (311)
.|..+.+.|... +|++++=..+
T Consensus 309 ~~s~~~~~p~~~~~iv~~~N~~~ 331 (351)
T 2qmi_A 309 YTGYIGYIPEKKIGVAVLENSSG 331 (351)
T ss_dssp CEEEEEEETTTTEEEEEEESSSS
T ss_pred CCEEEEEEECCCEEEEEEECCCC
T ss_conf 73799999559989999992899
No 28
>>1o7e_A L2 beta lactamase; hydrolase, class A; 1.51A {Stenotrophomonas maltophilia} (A:)
Probab=81.11 E-value=0.63 Score=26.41 Aligned_cols=227 Identities=14% Similarity=0.084 Sum_probs=106.4
Q ss_pred CHHHHCCCHHHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCH-H--HHHHHCCCCCCCCCHHHH-HHH
Q ss_conf 83320598247028998089-978876687864019999999999999961128-9--999946576567720444-201
Q gi|254780186|r 27 IPELAKVRIDHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFDE-E--IWKRVGREPSGSSFDSIV-QLE 101 (311)
Q Consensus 27 IP~La~vdp~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~-~--V~~~VG~ePSg~~FNSi~-~Le 101 (311)
|..+....+...|+.+.+.+ |+++... .+.+|++-|++|++++.++++..-+ + +.++|-..+....-.+-. .+.
T Consensus 20 i~~~~~~~~~~~s~~v~d~~tg~~~~~n-~~~~~~~AS~~Kl~~~~~~l~~~~~g~l~ld~~i~~~~~~~~~~~~~~~~~ 98 (276)
T 1o7e_A 20 FAALEKACAGRLGVTLLDTASGRRIGHR-QDERFPMCSTFKSMLAATVLSQAERMPALLDRRVPVGEADLLSHAPVTRRH 98 (276)
T ss_dssp HHHHHHHHTSEEEEEEEETTTCCEEEES-TTSCEECGGGGHHHHHHHHHHHHTTCTTTTTCEEEECGGGCCSSCTTGGGG
T ss_pred HHHHHHHCCCEEEEEEEECCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCCCCC
T ss_conf 9999986297699999989999887777-996112268999999999998776289786736996077703689753347
Q ss_pred CCCCCCCCC-----CH---HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 148984763-----11---1379999986448888899999999999987289986247899998511241279999999
Q gi|254780186|r 102 NENGIPRNP-----FV---NAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFV 173 (311)
Q Consensus 102 ~~~g~P~NP-----mi---NAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~L 173 (311)
.....+.-= |+ |..|.++...+ ......+.+++.+... ..++...+..+........
T Consensus 99 ~g~~~tv~dLl~~mi~~SdN~Aa~~L~~~~----g~~~~~~~~~~~m~~~--a~~lg~~~~~~~~~~~~~~--------- 163 (276)
T 1o7e_A 99 AGKDMTVRDLCRATIITSDNTAANLLFGVV----GGPPAVTAFLRASGDT--VSRSDRLEPELNSFAKGDP--------- 163 (276)
T ss_dssp TTEEEEHHHHHHHHHHSCCHHHHHHHHHHH----THHHHHHHHHHHHTCS--SCCCCCCTTGGGCCBTTBC---------
T ss_pred CCCCEEHHHHHHHHHHHCCHHHHHHHHHHH----CCCHHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCC---------
T ss_conf 998123999999998847459999999981----7908999999980853--3104555442346889996---------
Q ss_pred HHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHH--HHHHH
Q ss_conf 8278888998999999998730000799999999998259707778875518999977554454113312566--78987
Q gi|254780186|r 174 RSYGNIRYKIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSG--DFAYR 251 (311)
Q Consensus 174 k~~g~~~~dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG--~fa~~ 251 (311)
.-..|++|++++..-|.. .+.+.+.........|...--+...- .+-+.
T Consensus 164 ---------------------~n~tTa~d~~~ll~~l~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (276)
T 1o7e_A 164 ---------------------RDTTTPAAMAATLQRVVL--------GEVLQPASRQQLADWLIDNETGDACLRAGLGKR 214 (276)
T ss_dssp ---------------------TTEECHHHHHHHHHHHHT--------SSSSCHHHHHHHHHHHHTCSSCTTTHHHHSCTT
T ss_pred ---------------------CCCCCHHHHHHHHHHHHH--------CCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCC
T ss_conf ---------------------576189999999999983--------886688899999999856822563012457888
Q ss_pred HCCCCCCCC---CC-EEEEEE-C--C--CCEEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 078715652---21-103343-7--8--517998753207789848999999999999
Q gi|254780186|r 252 VGFPGKSGV---GG-GILAIV-P--S--KASIAVWSPGLDNSGNSLLGAKALELLAIR 300 (311)
Q Consensus 252 VGlPaKSGV---gG-gilavv-P--g--~~gIav~SP~LD~~GNSv~G~~~le~ls~~ 300 (311)
+-+-.|.|- +| ...+++ + + ++-++|+...-+ .+.......+..+++.
T Consensus 215 ~~~~~KtG~~~~~~~~~~a~~~~~~~~~~~i~vvl~~~~~--~~~~~~~~~i~~~~~~ 270 (276)
T 1o7e_A 215 WRVGDKTGSNGEDARNDIAVLWPVAGGAPWVLTAYLQAGA--ISYEQRASVLAQVGRI 270 (276)
T ss_dssp EEEEEEEEECSSSEEEEEEEEEETTSSCCEEEEEEEECTT--SCHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEEECCCC--CCHHHHHHHHHHHHHH
T ss_conf 7798875457668678899999658997899999957999--9989999999999999
No 29
>>2bcf_A Probable D-alanyl-D-alanine carboxypeptidase DACB2; penicillin-binding protein, DD-2 carboxypeptidase, directed evolution; 2.30A {Mycobacterium tuberculosis} (A:)
Probab=79.87 E-value=2 Score=23.14 Aligned_cols=215 Identities=14% Similarity=0.039 Sum_probs=98.5
Q ss_pred HHCCCHHH--CEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC-HH-H-HHHHCCCCCCCCCHHHHHHHCC
Q ss_conf 20598247--028998089-97887668786401999999999999996112-89-9-9994657656772044420114
Q gi|254780186|r 30 LAKVRIDH--FGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFD-EE-I-WKRVGREPSGSSFDSIVQLENE 103 (311)
Q Consensus 30 La~vdp~~--fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G-~~-V-~~~VG~ePSg~~FNSi~~Le~~ 103 (311)
++...|+. -++.+.+.+ |++...=+.+.+|++.|++|.+++.++++++. ++ + .+.--..+.|.. ..+...
T Consensus 10 ~~~~~~~~~a~~~~v~d~~tg~~l~~~n~d~~~~~AS~~Kl~~~~~~l~~l~ld~~i~i~~~~~~~~g~~----~~~~~g 85 (276)
T 2bcf_A 10 GSVPIPDGPAQTWIVADLDSGQVLAGRDQNVAHPPASTIKVLLALVALDELDLNSTVVADVADTQAECNC----VGVKPG 85 (276)
T ss_dssp TCCCCCCCSCSEEEEEETTTCEEEEEESTTCCBCCGGGHHHHHHHHHHHHCCTTCEEECCTGGGCCSSCC----CCCCTT
T ss_pred CCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH----HHCCHH
T ss_conf 7889999763289999999998900148499807199999999999997347898588667885533123----100224
Q ss_pred CCCCC----CCC-H---HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 89847----631-1---137999998644888889999999999998728998624789999851124127999999982
Q gi|254780186|r 104 NGIPR----NPF-V---NAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRS 175 (311)
Q Consensus 104 ~g~P~----NPm-i---NAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~ 175 (311)
...+. ..| + |-.|.++...+- ..+.-++.+-+..+++ |-..-.+. ..
T Consensus 86 ~~~tv~ell~~mi~~SdN~Aa~~L~~~~G---~~~~~~~~mn~~a~~l-G~~~t~~~---------------------~~ 140 (276)
T 2bcf_A 86 RSYTVRQLLDGLLLVSGNDAANTLAHXLG---GQDVTVAKXNAKAATL-GATSTHAT---------------------TP 140 (276)
T ss_dssp CEEEHHHHHHHHHHSCCHHHHHHHHHHTT---CHHHHHHHHHHHHHHH-TCTTCBCS---------------------SS
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHC---CCCHHHHHHHHHHHHH-CCCCCEEE---------------------EC
T ss_conf 56789998867788751588898877314---7621688999999985-78753012---------------------03
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCC----------CCHHH
Q ss_conf 78888998999999998730000799999999998259707778875518999977554454113----------31256
Q gi|254780186|r 176 YGNIRYKIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCG----------HYDHS 245 (311)
Q Consensus 176 ~g~~~~dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcG----------mYd~S 245 (311)
.|....+. .=..|++|+|++...+.++- .+.+........++.+-+ ++...
T Consensus 141 ~g~~~~~~-----------~n~tTa~Dla~l~~~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (276)
T 2bcf_A 141 SGLDGPGG-----------SGASTAHDLVVIFRAAXANP--------VFAQIIAEPSAXFPSDDGEQLIVNQDELLQRYP 201 (276)
T ss_dssp SSSCBTTB-----------SCBBCHHHHHHHHHHHHHSH--------HHHHHHHCSEEEECCC--CEEEECCCTHHHHST
T ss_pred CCCCCCCC-----------CCCCCHHHHHHHHHHHHHHH--------HHHHHCCEEEEEEECCCCCEEEEHHHHHHCCCC
T ss_conf 68886565-----------45350777889999875456--------777644502478705786253003445541488
Q ss_pred HHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHH
Q ss_conf 67898707871565221103343785179987532077898489999
Q gi|254780186|r 246 GDFAYRVGFPGKSGVGGGILAIVPSKASIAVWSPGLDNSGNSLLGAK 292 (311)
Q Consensus 246 G~fa~~VGlPaKSGVgGgilavvPg~~gIav~SP~LD~~GNSv~G~~ 292 (311)
+..+.+.|-=.++|-.-++.+..+|+--|+|..--++..+...|-..
T Consensus 202 ~~~g~KtG~~~~a~~~~~~~~~~~g~~~i~v~~~~~~~~~~~~~~~~ 248 (276)
T 2bcf_A 202 GAIGGKTGYTNAARKTFVGAAARGGRRLVIAXXYGLVKEGGPTYWDQ 248 (276)
T ss_dssp TEEEEEEEEETTTEEEEEEEEEETTEEEEEEEEEECCCTTCCCHHHH
T ss_pred CEEECCCCCCCCCCCEEEEEEEECCEEEEEEEECCCCCCCHHHHHHH
T ss_conf 74874576557776569999999998999999788777873479999
No 30
>>1m40_A TEM-1, beta-lactamase TEM; acylation mechanism, ultra- high resolution, hydrolase; HET: CB4; 0.85A {Escherichia coli} (A:)
Probab=78.81 E-value=0.96 Score=25.22 Aligned_cols=62 Identities=19% Similarity=0.148 Sum_probs=44.3
Q ss_pred HHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--H-HHHHHHCCCCCCCCCHHH
Q ss_conf 47028998089-97887668786401999999999999996112--8-999994657656772044
Q gi|254780186|r 36 DHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFD--E-EIWKRVGREPSGSSFDSI 97 (311)
Q Consensus 36 ~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G--~-~V~~~VG~ePSg~~FNSi 97 (311)
-.+++.+.+.+ |+++..-+.+.+|+.-|+.|++++..+++... + ..-++|-.+++...-.+-
T Consensus 17 ~~~s~~v~Dl~tg~~l~~~n~d~~~~~AS~~Kl~~~~~~~~~i~~g~l~~~~~i~i~~~~~~~~~~ 82 (263)
T 1m40_A 17 ARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSP 82 (263)
T ss_dssp SEEEEEEEETTTCCEEEEESTTSCEECGGGHHHHHHHHHHHHHHTTSCCTTCEECCCGGGCCSCCT
T ss_pred CEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHCCCCCC
T ss_conf 869999999999968456889983344789999999999998645898878469973888026898
No 31
>>2wzx_A Beta-lactamase; inhibitor, hydrolase, antibiotic resistance; HET: ZX0; 1.40A {Pseudomonas aeruginosa} PDB: 2wzz_A* (A:)
Probab=78.25 E-value=3.3 Score=21.70 Aligned_cols=110 Identities=9% Similarity=-0.038 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHC-------------CCCHHH----HHHH
Q ss_conf 99999873000079999999999825970777887551899997755445411-------------331256----6789
Q gi|254780186|r 187 LKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTC-------------GHYDHS----GDFA 249 (311)
Q Consensus 187 Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~Tc-------------GmYd~S----G~fa 249 (311)
.+...-.+.+-.|+.|+|+.+..+.|+|. .+++++++.+.++...+--..- ...+.. ..|.
T Consensus 216 ~~~~~~~g~~~~t~~Dla~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 293 (371)
T 2wzx_A 216 GPLDAEGYGVKTSAADLLRFVDANLHPER--LDRPWAQALDATHRGYYKVGDMTQGLGWEAYDWPISLKRLQAGNSTPMA 293 (371)
T ss_dssp CTTHHHHHCCEEEHHHHHHHHHHHHCGGG--SCHHHHHHHHTTSEEEEEETTEEECSSCEEEESSCCHHHHHHHTSHHHH
T ss_pred CCCCCCCCEEEECHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC
T ss_conf 65345354233469999999999858998--8879999999753111456754334540103776554324578766533
Q ss_pred HHH---C------------CCCCCCCC---CEEEEEECCC-CEEEEECCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 870---7------------87156522---1103343785-179987532077898489999999999994
Q gi|254780186|r 250 YRV---G------------FPGKSGVG---GGILAIVPSK-ASIAVWSPGLDNSGNSLLGAKALELLAIRT 301 (311)
Q Consensus 250 ~~V---G------------lPaKSGVg---GgilavvPg~-~gIav~SP~LD~~GNSv~G~~~le~ls~~l 301 (311)
+.. + +..++|-. |..+.+.|.. .+|++.+ |..+.+.....+.+.|.+.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~h~G~~~g~~s~~~~~pe~~~~iv~l~---N~~~~~~~~~~~~~~l~~~~ 361 (371)
T 2wzx_A 294 LQPHRIARLPAPQALEGQRLLNKTGSTNGFGAYVAFVPGRDLGLVILA---NRNYPNAERVKIAYAILSGL 361 (371)
T ss_dssp HSCEECEEEEEEEECCSSEEEEEEEECSSCEEEEEEEGGGTEEEEEEE---SBCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCEEEEEEE---CCCCCCHHHHHHHHHHHHHH
T ss_conf 355444566777677886599835647864189999987997999998---58999779999999999989
No 32
>>3c5a_A Class A carbapenemase KPC-2; beta-lactamase, C-terminal deleted mutant, plasmid, hydrolase; HET: CIT; 1.23A {Escherichia coli} PDB: 2ods_A 2ov5_A* 3e2k_A 3e2l_A* (A:)
Probab=78.18 E-value=0.75 Score=25.90 Aligned_cols=54 Identities=22% Similarity=0.154 Sum_probs=40.3
Q ss_pred CCCCHHHHCCCHHHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 98283320598247028998089-97887668786401999999999999996112
Q gi|254780186|r 24 ADYIPELAKVRIDHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFD 78 (311)
Q Consensus 24 A~YIP~La~vdp~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G 78 (311)
+.=|+.+.+--+-..++++.+.+ |+++... .+.+|+..|+.|++++..+++...
T Consensus 5 ~~~i~~~~~~~~~~~s~~v~d~~tg~~~~~n-~d~~~~~AS~~Kl~~~~~~l~~~~ 59 (264)
T 3c5a_A 5 AEPFAKLEQDFGGSIGVYAMDTGSGATVSYR-AEERFPLCSSFKGFLAAAVLARSQ 59 (264)
T ss_dssp THHHHHHHHHHTSEEEEEEEETTTCCEEEES-TTSCEECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEEEECCCCCEEEEC-CCCEECCHHHHHHHHHHHHHHHHH
T ss_conf 8999999987398799999999999888888-997586498999999999999876
No 33
>>3i7j_A Beta-lactamase MB2281C; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 2.20A {Mycobacterium bovis} (A:)
Probab=77.72 E-value=2.4 Score=22.64 Aligned_cols=42 Identities=14% Similarity=0.212 Sum_probs=30.4
Q ss_pred HCEEEE-EECCCCE-EEECCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 702899-8089978-87668786401999999999999996112
Q gi|254780186|r 37 HFGMSL-ALEDGTV-YSVGESEFLFSIQSISKVFLLTIALRKFD 78 (311)
Q Consensus 37 ~fgiai-~t~dG~~-~~~GD~~~~FsiqSisK~f~l~~al~~~G 78 (311)
.-|+++ +..||++ |.-.+.++.|.+-|++|.|+-.++++...
T Consensus 12 ~~g~~v~v~~~G~vv~~~~~~dt~~~~aS~tK~~ta~~i~~lve 55 (280)
T 3i7j_A 12 VPAAAAAVIGPAGVLATHGDTARVFALASVTKPLVARAAQVAVE 55 (280)
T ss_dssp SSCEEEEEEETTEEEEEESCTTSCEECGGGHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHH
T ss_conf 98663389839978701389988897660699999999999998
No 34
>>3cg5_A Beta-lactamase, penicillinase; alpha-beta structure, covalent adduct, antibiotic resistance, hydrolase, lipoprotein, membrane; HET: ISS; 1.70A {Mycobacterium tuberculosis} PDB: 3dwz_A* 2gdn_A (A:)
Probab=77.71 E-value=0.82 Score=25.65 Aligned_cols=211 Identities=13% Similarity=0.055 Sum_probs=95.3
Q ss_pred HHHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCH-HHHHHHCCCCCCCCCH-HHHHHHCCCCCCCCCC
Q ss_conf 247028998089-978876687864019999999999999961128-9999946576567720-4442011489847631
Q gi|254780186|r 35 IDHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFDE-EIWKRVGREPSGSSFD-SIVQLENENGIPRNPF 111 (311)
Q Consensus 35 p~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~-~V~~~VG~ePSg~~FN-Si~~Le~~~g~P~NPm 111 (311)
+..+|+++.+.+ |+++... .+.+|+..|+.|.+++.++++..-+ ++-.++=...+...-. +... .+.+.-
T Consensus 14 ~~~~s~~v~dl~tg~~~~~n-~~~~~~~AS~~Kl~~~~~~l~~~~~g~ld~~~~~~~~~~~~~~~~~~------~~~~~~ 86 (265)
T 3cg5_A 14 DARLGVYVPATGTTAAIEYR-ADERFAFCSTFKAPLVAAVLHQNPLTHLDKLITYTSDDIRSISPVAQ------QHVQTG 86 (265)
T ss_dssp TCEEEEEECCCSSCCCEEES-TTSCEECGGGGHHHHHHHHHHHSCGGGGGCEECCCGGGCCSCCTTHH------HHTTTC
T ss_pred CCEEEEEEEECCCCCEEEEC-CCCEEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCCCC------CCCCCC
T ss_conf 98699999989999888888-99627038999999999999747667888538960899616897302------478981
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 11379999986448888899999999999987289986247899998511241279999999827888899899999999
Q gi|254780186|r 112 VNAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDVLKFYF 191 (311)
Q Consensus 112 iNAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf 191 (311)
+.-.-.....++.+. ......+. +.+ |... .+-+.+ |+-+..+-...-.+.+...+.-+...
T Consensus 87 ~tv~~ll~~~i~~S~---N~a~~~l~---~~~-g~~~-~~~~~m----------n~~~~~lg~~~~~~~~~~~~~~~~~~ 148 (265)
T 3cg5_A 87 MTIGQLCDAAIRYSD---GTAANLLL---ADL-GGPG-GGTAAF----------TGYLRSLGDTVSRLDAEEPELNRDPP 148 (265)
T ss_dssp EEHHHHHHHHHHSCC---HHHHHHHH---HHH-CSGG-GGHHHH----------HHHHHHTTCCSCCCCCCTTGGGCCCT
T ss_pred EEHHHHHHHHHHHCH---HHHHHHHH---HHH-CCHH-HHHHHH----------HHHHHHCCCCCEEECCCCCCCCCCCC
T ss_conf 649999999998530---79999999---994-6818-899999----------99999849973550467654455679
Q ss_pred HHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHH--HHHHHHHCCCCCCCCC----CEEE
Q ss_conf 873000079999999999825970777887551899997755445411331256--6789870787156522----1103
Q gi|254780186|r 192 HQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHS--GDFAYRVGFPGKSGVG----GGIL 265 (311)
Q Consensus 192 ~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~S--G~fa~~VGlPaKSGVg----Ggil 265 (311)
..-.-..|++|++++..-|.. .+.+++........+|...-.+..- ......+-+-.|+|-. ...+
T Consensus 149 ~~~~n~tta~d~a~ll~~l~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KtG~~~~~~~~dv 220 (265)
T 3cg5_A 149 GDERDTTTPHAIALVLQQLVL--------GNALPPDKRALLTDWMARNTTGAKRIRAGFPADWKVIDKTGTGDYGRANDI 220 (265)
T ss_dssp TCCTTEECHHHHHHHHHHHHT--------SSSSCHHHHHHHHHHHHTCSSCTTTHHHHSCTTSEEEEEEEEETTTEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHH--------CCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEEECCCCCCCEEEE
T ss_conf 963353499999999999973--------776798999999999854852776653447888569998400578828999
Q ss_pred EEE--CC--CCEEEEEC
Q ss_conf 343--78--51799875
Q gi|254780186|r 266 AIV--PS--KASIAVWS 278 (311)
Q Consensus 266 avv--Pg--~~gIav~S 278 (311)
+++ |+ ..-++|+.
T Consensus 221 giv~~~~g~~~v~vv~~ 237 (265)
T 3cg5_A 221 AVVWSPTGVPYVVAVMS 237 (265)
T ss_dssp EEEECTTSCEEEEEEEE
T ss_pred EEEECCCCCEEEEEEEE
T ss_conf 99996999989999995
No 35
>>2cc1_A Beta-lactamase, penicillinase; hydrolase, antibiotic resistance, broad-spectrum; 2.13A {Mycobacterium fortuitum} (A:)
Probab=77.22 E-value=1.1 Score=24.73 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=35.4
Q ss_pred HHHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 247028998089-97887668786401999999999999996112
Q gi|254780186|r 35 IDHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFD 78 (311)
Q Consensus 35 p~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G 78 (311)
+...|+.+...+ |+++... .+.+|+.-|+.|++++..+++..-
T Consensus 15 ~~~~s~~v~dl~tg~~~~~n-~d~~~~~AS~~Kl~~~~~~l~~~~ 58 (262)
T 2cc1_A 15 NVLIGLYAANLQSGRRITHR-PDEMFAMCSTFKGYVAARVLQMAE 58 (262)
T ss_dssp TEEEEEEEEETTTCCEEEES-TTSCEECGGGHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 98699999989999887889-998387389999999999999876
No 36
>>1xkz_A Regulatory protein BLAR1; beta-lactam receptor, signal transduction, signaling protein; HET: CAZ EPE; 1.75A {Staphylococcus aureus} (A:)
Probab=77.05 E-value=1.6 Score=23.83 Aligned_cols=206 Identities=15% Similarity=0.076 Sum_probs=100.7
Q ss_pred CHHHCEEEEEEC-CCCEEEE-CC-CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCC
Q ss_conf 824702899808-9978876-68-78640199999999999999611289999946576567720444201148984763
Q gi|254780186|r 34 RIDHFGMSLALE-DGTVYSV-GE-SEFLFSIQSISKVFLLTIALRKFDEEIWKRVGREPSGSSFDSIVQLENENGIPRNP 110 (311)
Q Consensus 34 dp~~fgiai~t~-dG~~~~~-GD-~~~~FsiqSisK~f~l~~al~~~G~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NP 110 (311)
+...-++.+... +|++... |. ...+|+.-|+.|||+++.||+..- -+....+ ...+.|+|+
T Consensus 27 ~~~~~~~vv~d~~tG~IlA~~~~~~~~~~~PGStfK~~~~~aale~g~---------~~~~~~~-------~~~~~~~n~ 90 (255)
T 1xkz_A 27 GSNSGSFVMYSMKKDKYYIYNEKESRKRYSPNSTYKIYLAMFGLDRHI---------INDENSR-------MSWNHKHYP 90 (255)
T ss_dssp TTCEEEEEEEETTTTEEEEESHHHHTSEECCGGGGHHHHHHHHHHTTS---------SCSSCCC-------BCCCCCCCS
T ss_pred CCCCEEEEEEECCCCCEECCCHHHHCCCCCCCCHHHHHHHHHHHHCCC---------CCCCCCC-------CCCCCCCCC
T ss_conf 898405999989999666128889768789966799999999998799---------8776400-------258864555
Q ss_pred CHHHHHHHHHHHHCCCCCHHHHHHHHHHHH-HHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 111379999986448888899999999999-9872899862478999985112412799999998278888998999999
Q gi|254780186|r 111 FVNAGAIVVSDAVLGSSSADDAIENFLNFM-RGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDVLKF 189 (311)
Q Consensus 111 miNAGAI~~~sli~~~~~~~~~~~~i~~~~-~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~ 189 (311)
.-.- .+..+..+.+..=.+.. -+++ .++..+ .+..+++.+|.-. +....+..
T Consensus 91 ~~~~---------~~~~tl~~Al~~S~N~~~~~l~--~~~G~~---------------~~~~~~~~~g~~~-~~~~~~~~ 143 (255)
T 1xkz_A 91 FDAW---------NKEQDLNTAMQNSVNWYFERIS--DQIPKN---------------YTATQLKQLNYGN-KNLGSYKS 143 (255)
T ss_dssp SGGG---------SSCBCHHHHHHTTCHHHHHHHH--TTSCHH---------------HHHHHHHHHTCTT-CCCTTSSS
T ss_pred CCCC---------CCCCCHHHHHHHCCCHHHHEEE--ECCCCH---------------HHHHHHHHHCCCC-CCCCCCCC
T ss_conf 6677---------8998999999980874761210--014837---------------8899999828898-88666655
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHH-HCCCCCCCCCC------
Q ss_conf 99873000079999999999825970777887551899997755445411331256678987-07871565221------
Q gi|254780186|r 190 YFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYR-VGFPGKSGVGG------ 262 (311)
Q Consensus 190 Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~-VGlPaKSGVgG------ 262 (311)
+.-+=++.+|..++|.+.++|||+|+- +.+..+..+...+..- ... .-..+|.|-+.
T Consensus 144 ~~~~g~~~vtp~~~a~~~~~ian~G~~-------~~p~~i~~v~~~~~~~---------~~~~~~~~g~tGTa~~~~~~~ 207 (255)
T 1xkz_A 144 YWMEDSLKISNLEQVIVFKNMMEQNNH-------FSKKAKNQLSSSLLIK---------KNEKYELYGKTGTGIVNGKYN 207 (255)
T ss_dssp TTTTSSCCEEHHHHHHHHHHHHHCC-C-------SCHHHHHHHHHHHEEE---------ECSSEEEEEEEEEEEETTEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCC-------CCHHHHHHHHHHHHHC---------CCCEEEEEECCEEEECCCCCC
T ss_conf 100786112399999999999718997-------5499999865554302---------321367652111101289974
Q ss_pred --EEEEEECC---CCEEEEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf --10334378---51799875320778984899999999999
Q gi|254780186|r 263 --GILAIVPS---KASIAVWSPGLDNSGNSLLGAKALELLAI 299 (311)
Q Consensus 263 --gilavvPg---~~gIav~SP~LD~~GNSv~G~~~le~ls~ 299 (311)
-.++..|. +..+++|-. -++.|...++-.+-+.+.+
T Consensus 208 ~~wfvG~~p~~~~~~~~~v~i~-~~~~g~~~A~~i~~~i~~~ 248 (255)
T 1xkz_A 208 NGWFVGYVITNHDKYYFATHLS-DGKPSGKNAELISEKILKE 248 (255)
T ss_dssp EEEEEEEEEESSCEEEEEEEEE-ESSCCHHHHHHHHHHHHHH
T ss_pred CEEEEEEEECCCCEEEEEEEEE-CCCCCCCHHHHHHHHHHHH
T ss_conf 2899999986998699999997-7998872799999999997
No 37
>>1hzo_A Beta-lactamase; mixed alpha/beta, cephalosporinase, hydrolase; HET: MES; 1.75A {Proteus vulgaris} (A:)
Probab=75.90 E-value=1.1 Score=24.94 Aligned_cols=58 Identities=19% Similarity=0.220 Sum_probs=41.0
Q ss_pred HHHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCH---HHHHHHCCCCCCCC
Q ss_conf 247028998089-978876687864019999999999999961128---99999465765677
Q gi|254780186|r 35 IDHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFDE---EIWKRVGREPSGSS 93 (311)
Q Consensus 35 p~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~---~V~~~VG~ePSg~~ 93 (311)
+-.+++.+++.+ |+++... .+.+|+..|+.|++++..+++...+ ...++|-..++...
T Consensus 18 ~~~~s~~v~dl~tg~~~~~n-~~~~~~~AS~~Kl~~~~~~l~~~~~g~l~l~~~i~~~~~~~~ 79 (271)
T 1hzo_A 18 QGRLGVALINTEDNSQITYR-GEERFAMASTSKVMAVAAVLKASEKQAGLLDKNITIKKSDLV 79 (271)
T ss_dssp TSEEEEEEEETTTTEEEEES-TTSCEECGGGGHHHHHHHHHHHHHHSTTGGGCEECCCGGGCC
T ss_pred CCEEEEEEEECCCCCEEEEC-CCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHH
T ss_conf 97399999989999689988-996472736999999999999997599987635887776521
No 38
>>2ffy_A Beta-lactamase; AMPC, deacylation, transition state, boronic acid, hydrolase; HET: SM3; 1.07A {Escherichia coli} (A:)
Probab=75.07 E-value=2.7 Score=22.29 Aligned_cols=46 Identities=4% Similarity=-0.165 Sum_probs=36.0
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHH
Q ss_conf 999987300007999999999982597077788755189999775544
Q gi|254780186|r 188 KFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAV 235 (311)
Q Consensus 188 d~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~ 235 (311)
....-...+..|++|+++.+..+.|+|. ..++++++++..+....-
T Consensus 212 ~~~~~~~g~~~t~~D~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~ 257 (358)
T 2ffy_A 212 ALDAEAYGVKSTIEDMARWVQSNLKPLD--INEKTLQQGIQLAQSRYW 257 (358)
T ss_dssp TTHHHHTCCEECHHHHHHHHHHHHCGGG--CSSHHHHHHHHHHTSEEE
T ss_pred CCCCCCCCEECCHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHCEEC
T ss_conf 4557776152389999999999737998--887899988877622202
No 39
>>3lez_A Beta-lactamase; antibiotic resistance, halotolerant, DEEP- SEA bacterium, hydrolase; HET: EPE; 1.25A {Oceanobacillus iheyensis} (A:)
Probab=73.63 E-value=1.2 Score=24.56 Aligned_cols=201 Identities=10% Similarity=0.032 Sum_probs=97.9
Q ss_pred HHHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCH-HHHHHHCCCCCCCCCHHHHH-HHCCCCCCCCCC
Q ss_conf 247028998089-978876687864019999999999999961128-99999465765677204442-011489847631
Q gi|254780186|r 35 IDHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFDE-EIWKRVGREPSGSSFDSIVQ-LENENGIPRNPF 111 (311)
Q Consensus 35 p~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~-~V~~~VG~ePSg~~FNSi~~-Le~~~g~P~NPm 111 (311)
+...++.+.+.+ |+++... .+.+|+..|+.|++....+++..-+ ++-..+-...+....++-.. +......+.--+
T Consensus 13 ~~~~s~~v~d~~tg~~~~~n-~d~~~~~AS~~Kl~~~~~~~~~~~~g~l~~~~~i~~~~~~~~~~~~~~~~~~~~tv~~l 91 (260)
T 3lez_A 13 DVRLGVYAIDTGADKEISYR-ENERFAYTSTFKPLAVGAVLQTKSDEELEETITYSEEDLVTYSPITEQHVDEGMTLVEI 91 (260)
T ss_dssp TCEEEEEEEETTTTEEEEES-TTSEEECGGGGHHHHHHHHHHHCCHHHHHSEECCCGGGCCSSCTTGGGCTTTCEEHHHH
T ss_pred CCEEEEEEEECCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCEECCCCCCEEHHHH
T ss_conf 98699999989999888888-99747328899999999999854257877149962310458998431268993519999
Q ss_pred H-----HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 1-----13799999864488888999999999999872899862478999985112412799999998278888998999
Q gi|254780186|r 112 V-----NAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDV 186 (311)
Q Consensus 112 i-----NAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~ 186 (311)
+ .++=.++-.|+. .......-+.++..+...+ ..+...+.-+.... +...
T Consensus 92 l~~mi~~SdN~A~~~L~~-~~g~~~~~~~~~~~~~~~~--~~lg~~~~~~~~~~----------------~~~~------ 146 (260)
T 3lez_A 92 ADAAIRYSDNTAGNLLLE-AMGGPDELETILRDIGDET--IEMDRYETELNEAK----------------PGDI------ 146 (260)
T ss_dssp HHHHHHHCCHHHHHHHHH-HTTSHHHHHHHHHHTTCCS--CBCCCCTTGGGCCC----------------TTCC------
T ss_pred HHHHHHHCHHHHHHHHHH-HHCCCHHHHHHHHHHCHHH--HHCCCCCCCCCCCC----------------CCCC------
T ss_conf 999987266999999999-8578367999999815144--31367776444689----------------9854------
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHH--HHHHHCCCCCCCCC---
Q ss_conf 9999987300007999999999982597077788755189999775544541133125667--89870787156522---
Q gi|254780186|r 187 LKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGD--FAYRVGFPGKSGVG--- 261 (311)
Q Consensus 187 Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~--fa~~VGlPaKSGVg--- 261 (311)
.-..|++|++++..-+.. ...+++........+|..+-.++.--. ....+-+=.|.|-.
T Consensus 147 --------~n~tta~d~a~l~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~KtG~~~~~ 210 (260)
T 3lez_A 147 --------RDTSTAKAMATTLQQYVL--------EDVLDADRREVLTNMLINNTTGDALIRAGVPDGWTVGDKTGAGGYG 210 (260)
T ss_dssp --------TTEEEHHHHHHHHHHHHT--------SSSSCHHHHHHHHHHHHTCSSCTTTGGGGSCTTCEEEEEEEEETTT
T ss_pred --------CCCCCHHHHHHHHHHHHH--------CCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEEECCCCCC
T ss_conf --------455489999999999970--------7767888999999998548105233344478886688875767878
Q ss_pred C-EEEEEE--CCC-CEEEEE
Q ss_conf 1-103343--785-179987
Q gi|254780186|r 262 G-GILAIV--PSK-ASIAVW 277 (311)
Q Consensus 262 G-gilavv--Pg~-~gIav~ 277 (311)
| -.++++ |+. +-|+|.
T Consensus 211 ~~~d~g~v~~~~~~~~~~v~ 230 (260)
T 3lez_A 211 TRNDIGIIWPEGDEEPIVIA 230 (260)
T ss_dssp EEEEEEEEECTTTCCCEEEE
T ss_pred CEEEEEEEEECCCCEEEEEE
T ss_conf 65789999958995189999
No 40
>>2dcf_A 6-aminohexanoate-dimer hydrolase; HET: ACA MES; 1.40A {Flavobacterium SP} (A:50-392)
Probab=73.53 E-value=3.1 Score=21.95 Aligned_cols=261 Identities=15% Similarity=-0.014 Sum_probs=118.6
Q ss_pred HCEEEEEECCCCEEEEC----CCCCCCCHHHHHHHHHHHHHHHH--CCH-HHHHHHCCCCCC---CCCH--HHHHHHC-C
Q ss_conf 70289980899788766----87864019999999999999961--128-999994657656---7720--4442011-4
Q gi|254780186|r 37 HFGMSLALEDGTVYSVG----ESEFLFSIQSISKVFLLTIALRK--FDE-EIWKRVGREPSG---SSFD--SIVQLEN-E 103 (311)
Q Consensus 37 ~fgiai~t~dG~~~~~G----D~~~~FsiqSisK~f~l~~al~~--~G~-~V~~~VG~ePSg---~~FN--Si~~Le~-~ 103 (311)
.-|++|.--+..+++.+ +.++.|.|-|+||.|+-.+++.. .|. .+-+.|..---. .... .+.+|-. .
T Consensus 33 ~~g~~V~~~g~~~~~~~~g~~~~dt~~~i~S~sK~~ta~~i~~l~e~G~l~ld~~i~~~~p~~~~~~~~~iTl~~ll~ht 112 (343)
T 2dcf_A 33 TDAFLVLRGTEVVAEYYRAGFAPDDRHLLMAVSKSLCGTVVGALVDEGRIDPAQPVTEYVPELAGSVYDGPSVLQVLDMQ 112 (343)
T ss_dssp EEEEEEEETTEEEEEEECTTCCTTCCEECTTHHHHHHHHHHHHHHHTTSCCTTSBGGGTCGGGTTSTTSSCBHHHHHTTC
T ss_pred CCEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHCCC
T ss_conf 73799998999999971699883422227888889999999999865964235630001554434543431165420033
Q ss_pred CCCCCCCCHHHH----HHHHHHHHCCCCCHHHHHHHHHHHHHHHH----CCCCCCCCHHHH---H--HHHCCC--HHHHH
Q ss_conf 898476311137----99999864488888999999999999872----899862478999---9--851124--12799
Q gi|254780186|r 104 NGIPRNPFVNAG----AIVVSDAVLGSSSADDAIENFLNFMRGIA----GDASIHIDSVVA---N--SEIETG--YRNFA 168 (311)
Q Consensus 104 ~g~P~NPmiNAG----AI~~~sli~~~~~~~~~~~~i~~~~~~la----g~~~i~~d~~v~---~--SE~~t~--~rN~a 168 (311)
.|.|.....-.- -............. ..+.++..+.... -...-.|.+.-| . -|+.++ +....
T Consensus 113 sGl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~pg~~~~Ysn~~~~llg~iie~vtg~~~~~~~ 190 (343)
T 2dcf_A 113 ISIDYNEDYVDPASEVQTHDRSAGWRTRRH--GDPADTYEFLTTLRGDGSTGEFQYCSANTDVLAWIVERVTGLRYVEAL 190 (343)
T ss_dssp BCCSCCCCSSCTTSHHHHHHHHHTSSCCCT--TCCSSHHHHHHTCCCCSCBSSCCCCHHHHHHHHHHHHHHHCSCHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCCC--CCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHH
T ss_conf 678643343556413566666542011112--452789998740676799975899427778999999987377423344
Q ss_pred HHHHHHHCCCCCC--CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCC-----C
Q ss_conf 9999982788889--98999999998730000799999999998259707778875518999977554454113-----3
Q gi|254780186|r 169 LANFVRSYGNIRY--KIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCG-----H 241 (311)
Q Consensus 169 la~~Lk~~g~~~~--dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcG-----m 241 (311)
-.++++--|.-.. ...+........+....+..++++.+..++++|. +.+.++...+..+..+.-=..-- |
T Consensus 191 ~~~i~~PLgm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~--~~~t~~d~~~~~~~~~~~~~~~~~~~~~~ 268 (343)
T 2dcf_A 191 STYLWAKLDADRDATITVDTTGFGFANGGVSCTARDLARVGRMMLDGGV--APGGRVVSEDWVRRVLAGGSHEAMTDKGF 268 (343)
T ss_dssp HHHTGGGTTCSSCCEECBCTTCCBCTTTCEEECHHHHHHHHHHHHTTTE--ETTEECSCHHHHHHHHHCCCTTTCCCHHH
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCC--CCCCCCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 4422100122101223445677644353212121024343235641871--17851663999999857897311124565
Q ss_pred CHHHH------HHHH---HHCCCCCCCCCCEEEEEECCC-CEEEEECCCCCCCCCCHHH--HHHHHHHHHHH
Q ss_conf 12566------7898---707871565221103343785-1799875320778984899--99999999994
Q gi|254780186|r 242 YDHSG------DFAY---RVGFPGKSGVGGGILAIVPSK-ASIAVWSPGLDNSGNSLLG--AKALELLAIRT 301 (311)
Q Consensus 242 Yd~SG------~fa~---~VGlPaKSGVgGgilavvPg~-~gIav~SP~LD~~GNSv~G--~~~le~ls~~l 301 (311)
+..-. -|.. ..+.=.-+|-.|..+.+.|.. .+|.+++-..+..+..+.- ..+.+.+.+.+
T Consensus 269 ~~~~~~~~~glg~~~~~~~~~~~g~~gg~~~~~~~~p~~~~~iv~~~N~~~~~~~~~~~~~~~l~~~i~~~l 340 (343)
T 2dcf_A 269 TNTFPDGSYTRQWWCTGNERGNVSGIGIHGQNLWLDPLTDSVIVKLSSWPDPDTEHWHRLQNGILLDVSRAL 340 (343)
T ss_dssp HHHCTTCEEETTEEECCCTTCCEEEEETTTEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCEEECCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 667899987863551599997499984589489999359989999699999984468999999999999987
No 41
>>1bsg_A Beta lactamase, penicillinase; hydrolase, antibiotic resistance; 1.85A {Streptomyces albus G} (A:)
Probab=73.47 E-value=1.2 Score=24.64 Aligned_cols=42 Identities=21% Similarity=0.289 Sum_probs=35.6
Q ss_pred HHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 47028998089-97887668786401999999999999996112
Q gi|254780186|r 36 DHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFD 78 (311)
Q Consensus 36 ~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G 78 (311)
-.+++.+.+.+ |+++... .+.+|+.-|++|+++...+++...
T Consensus 16 ~~~s~~v~d~~tg~~~~~n-~d~~~~~AS~~Kl~~~~~~l~~v~ 58 (266)
T 1bsg_A 16 ARLGVYAYDTGSGRTVAYR-ADELFPMCSVFKTLSSAAVLRDLD 58 (266)
T ss_dssp SEEEEEEEETTTCCEEEES-TTSCEECGGGGHHHHHHHHHHHTC
T ss_pred CEEEEEEEECCCCCEEEEC-CCCEECCHHHHHHHHHHHHHHHHH
T ss_conf 7499999999999888988-998085289999999999999755
No 42
>>1w7f_A Beta-lactamase; hydrolase, isocitrate, bacillus licheniformis hydrolase; HET: ICT; 1.80A {Bacillus licheniformis} (A:)
Probab=72.98 E-value=1.9 Score=23.25 Aligned_cols=49 Identities=12% Similarity=0.105 Sum_probs=39.1
Q ss_pred HHHCCCHHHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 320598247028998089-97887668786401999999999999996112
Q gi|254780186|r 29 ELAKVRIDHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFD 78 (311)
Q Consensus 29 ~La~vdp~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G 78 (311)
++.+-....+|+.+.+.+ |+++... .+.+|+.-|+.|+++...+++...
T Consensus 52 ~~~~~~~~~~s~~v~Dl~tg~~~~~n-~d~~~~~AS~~Kl~~~~~~l~~~~ 101 (307)
T 1w7f_A 52 KLEEQFDAKLGIFALDTGTNRTVTYR-PDERFAFASTIKALTVGVLLQQKS 101 (307)
T ss_dssp HHHHHHTCEEEEEEEETTTCCEEEES-TTSCEECGGGHHHHHHHHHHHHCC
T ss_pred HHHHHCCCEEEEEEEECCCCCEEEEC-CCCEEECHHHHHHHHHHHHHHHHC
T ss_conf 99997098599999989999887777-997230268999999999999844
No 43
>>2qpn_A Beta-lactamase GES-1; APO-enzyme, plasmid, hydrolase; 1.10A {Klebsiella pneumoniae} (A:)
Probab=72.39 E-value=1.4 Score=24.15 Aligned_cols=43 Identities=16% Similarity=0.190 Sum_probs=35.5
Q ss_pred HHHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 247028998089-97887668786401999999999999996112
Q gi|254780186|r 35 IDHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFD 78 (311)
Q Consensus 35 p~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G 78 (311)
+...|+.+.+.+ |++|... .+.+|+..|+.|..+.+.++++..
T Consensus 36 ~~~~~v~~~d~~tg~~~~~n-~d~~~~~AS~~Kl~i~~~~~~~~~ 79 (287)
T 2qpn_A 36 AAQIGVAIVDPQGEIVAGHR-MAQRFAMCSTFKFPLAALVFERID 79 (287)
T ss_dssp TCEEEEEEECTTCCEEEEES-TTSCEECGGGGHHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 98599999989999189866-998542348999999999999997
No 44
>>2p74_A Beta-lactamase CTX-M-9A; ultra-high resolution, acylation, ESBL, hydrolase; HET: PO4; 0.88A {Escherichia coli} PDB: 3g2y_A* 1ylj_A* 1yly_A* 1ym1_A* 1yms_A* 1ymx_A* 3g2z_A* 3g30_A* 3g31_A* 3g32_A* 3g34_A* 3g35_A* 1ylt_A* 1ylz_A* 1ylw_A 1ylp_A* 1iys_A 2zq8_A* 1we4_A 1bza_A ... (A:)
Probab=70.16 E-value=1.8 Score=23.51 Aligned_cols=55 Identities=20% Similarity=0.245 Sum_probs=39.1
Q ss_pred HHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCH-H--HHHHHCCCCCC
Q ss_conf 47028998089-978876687864019999999999999961128-9--99994657656
Q gi|254780186|r 36 DHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFDE-E--IWKRVGREPSG 91 (311)
Q Consensus 36 ~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~-~--V~~~VG~ePSg 91 (311)
-..++++.+.+ |+++... .+.+|+.-|+.|++++..+++...+ + .-++|-..++-
T Consensus 18 ~~~s~~v~dl~tg~~~~~n-~d~~~~~AS~~Kl~i~~~~l~~~~~g~l~l~~~i~~~~~~ 76 (263)
T 2p74_A 18 GRLGVALIDTADNTQVLYR-GDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPAD 76 (263)
T ss_dssp SEEEEEEEETTTTEEEEES-TTSCEECGGGGHHHHHHHHHHHHTTCTTGGGCEEECCGGG
T ss_pred CEEEEEEEECCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHH
T ss_conf 7599999999999789977-9970411789999999999999874898877469962665
No 45
>>2qz6_A Beta-lactamase; psychrophIle, cold adaptation, antibiotic resistance, hydrolase, periplasm; 2.26A {Pseudomonas fluorescens} (A:)
Probab=69.01 E-value=8.7 Score=19.00 Aligned_cols=103 Identities=12% Similarity=-0.008 Sum_probs=50.8
Q ss_pred HHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHH--------------------HCCCCHHHHHHHHH--
Q ss_conf 30000799999999998259707778875518999977554454--------------------11331256678987--
Q gi|254780186|r 194 CSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVML--------------------TCGHYDHSGDFAYR-- 251 (311)
Q Consensus 194 Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~--------------------TcGmYd~SG~fa~~-- 251 (311)
=-+..+++|+++....+.|+|.- +++++.+....+....-.. ..+-......+.+.
T Consensus 218 ~g~~~t~~d~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g 295 (358)
T 2qz6_A 218 YGIKTSTSDLIHYVEVNMHPAKL--EKPLQQAIAATHTGYYTVDGMTQGLGWEMYPYPIKVDALVEGNSTQMAMEPHKVN 295 (358)
T ss_dssp TCCEECHHHHHHHHHHHHCGGGS--CHHHHHHHHHHTSEEEEETTEEECSSCEEEESSCCHHHHHHHTCSHHHHSCEECE
T ss_pred EEEEECHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 23982899999999998389977--7689999997524545678653344410036665543112476643344565544
Q ss_pred ----------HCCCCCCC---CCCEEEEEECCC-CEEEEECCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf ----------07871565---221103343785-179987532077898489999999999994
Q gi|254780186|r 252 ----------VGFPGKSG---VGGGILAIVPSK-ASIAVWSPGLDNSGNSLLGAKALELLAIRT 301 (311)
Q Consensus 252 ----------VGlPaKSG---VgGgilavvPg~-~gIav~SP~LD~~GNSv~G~~~le~ls~~l 301 (311)
...+.++| -.|-.+.+.|.. .+|++.+ |....+.....+.+.+.+.+
T Consensus 296 ~~~~~~~~~~~~~~~~~G~~g~~~s~~~~~p~~~~~iv~l~---N~~~~~~~~~~~~~~i~~~l 356 (358)
T 2qz6_A 296 WLTPPQAAPLDTLVNKTGSTGGFGAYVAYVPSKGLGVVILA---NKNYPNAERVKAAHAILSAM 356 (358)
T ss_dssp EEEEEECCCSSEEEEEEEECSSCEEEEEEETTTTEEEEEEE---SBCCCHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCEEEECCCCCCHHEEEEEEECCCEEEEEEE---CCCCCCHHHHHHHHHHHHHH
T ss_conf 33467777777679856737601299999988997999997---39999779999999999975
No 46
>>1g6a_A Beta-lactamase PSE-4; class A beta-lactamase, carbenicillinase, R234K mutant, hydrolase; 1.75A {Pseudomonas aeruginosa} (A:)
Probab=68.57 E-value=4.7 Score=20.73 Aligned_cols=42 Identities=17% Similarity=0.207 Sum_probs=35.1
Q ss_pred HHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 47028998089-97887668786401999999999999996112
Q gi|254780186|r 36 DHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFD 78 (311)
Q Consensus 36 ~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G 78 (311)
-.+|+++.+.+ |+++... .+.+|+.-|+.|++.+..+++..-
T Consensus 21 ~~~s~~v~dl~~g~~~~~n-~d~~~~~AS~~Kl~~~~~~l~~v~ 63 (271)
T 1g6a_A 21 ARIGVSVLDTQNGEYWDYN-GNQRFPLTSTFKTIACAKLLYDAE 63 (271)
T ss_dssp CEEEEEEEETTTTEEEEES-TTSCEECGGGGHHHHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 8299999989999788888-997131715999999999999998
No 47
>>2bg1_A PBP1B, penicillin-binding protein 1B; peptidoglycan, peptidoglycan synthesis multifunctional enzyme, cell WALL; 1.9A {Streptococcus pneumoniae} (A:1-165,A:237-418)
Probab=68.41 E-value=8.9 Score=18.92 Aligned_cols=128 Identities=13% Similarity=0.110 Sum_probs=73.1
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHCCCCCC--------------------CCCCEECCHH
Q ss_conf 99999827888899899999999873-00007999999999982597077--------------------7887551899
Q gi|254780186|r 169 LANFVRSYGNIRYKIEDVLKFYFHQC-SLMMNCVQLAKSGLYLAFRGYNS--------------------LTNQSVISPL 227 (311)
Q Consensus 169 la~~Lk~~g~~~~dv~~~Ld~Yf~~C-si~~t~~dLA~~~a~LAn~G~~P--------------------~t~~~vi~~~ 227 (311)
+..+++..|.-..+. +.+.+ -.= ++.+|..+||.+.++|||+|+-. ....++++++
T Consensus 167 ~~~~~~~~G~~~~~~-~~~~~--a~Gqg~~vtplqla~ayatiaN~G~~~~p~~i~~i~~~~g~~~~~~~~~~~~~~~~~ 243 (347)
T 2bg1_A 167 VKGYMEKMGYEIPEY-GIESL--PMGGGIEVTVAQHTNGYQTLANNGVYHQKHVISKIEAADGRVVYEYQDKPVQVYSKA 243 (347)
T ss_dssp HHHHHHHTTCCCSCC-CCTTG--GGTTTCCBCHHHHHHHHHHHHTTTEECCCBSEEEEECTTSCEEEECCCCCEECSCHH
T ss_pred HHHHHHHCCCCCCCC-CCCCC--CCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCHH
T ss_conf 676654014477511-12220--001322320003433222102698353652566214643222101035654557888
Q ss_pred HHHHHHHHHHH---CCCCHHHHHHHHHH-------CCCCCCCCCCE----EEEEECCCCEEEEECCCCCC------CCCC
Q ss_conf 99775544541---13312566789870-------78715652211----03343785179987532077------8984
Q gi|254780186|r 228 QSRCVNAVMLT---CGHYDHSGDFAYRV-------GFPGKSGVGGG----ILAIVPSKASIAVWSPGLDN------SGNS 287 (311)
Q Consensus 228 ~~~~v~s~M~T---cGmYd~SG~fa~~V-------GlPaKSGVgGg----ilavvPg~~gIav~SP~LD~------~GNS 287 (311)
.+..+..+|.. -|+=.......+.+ -+-+|.|-+-. -..-.....-+++|-|.=|. .|-+
T Consensus 244 ~a~~~~~~m~~vv~~~~~~~~~~~~~~~~~k~~~~~vagKTGTt~~~~d~w~~g~~~~~~~~~~vg~d~p~~~~~~~g~~ 323 (347)
T 2bg1_A 244 TATIMQGLLREVLSSRVTTTFKSNLTSLNPTLANADWIGKTGTTNQDENMWLMLSTPRLTLGGWIGHDDNHSLSQQAGYS 323 (347)
T ss_dssp HHHHHHHHHHHHHHTCSSCCHHHHHHHHCHHHHTSCCEEEEECCTTCSEEEEEEECSSEEEEEEEECTTCCCCCTTTTTT
T ss_pred HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCC
T ss_conf 98887653465204664521403655455444787641044589987033799637985799999689998675664754
Q ss_pred HHHHHHHHHHHH
Q ss_conf 899999999999
Q gi|254780186|r 288 LLGAKALELLAI 299 (311)
Q Consensus 288 v~G~~~le~ls~ 299 (311)
+++-.+-+.+..
T Consensus 324 ~a~~i~~~i~~~ 335 (347)
T 2bg1_A 324 NNSNYMAHLVNA 335 (347)
T ss_dssp HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
T ss_conf 159999999999
No 48
>>1ei5_A D-aminopeptidase, DAP; penicillin binding protein, alpha/beta domain, beta barrel domain, hydrolase; 1.90A {Ochrobactrum anthropi} (A:1-79,A:148-338)
Probab=65.50 E-value=1.6 Score=23.69 Aligned_cols=75 Identities=7% Similarity=-0.056 Sum_probs=41.3
Q ss_pred HHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC----------CCCCC--
Q ss_conf 873000079999999999825970777887551899997755445411331256678987078----------71565--
Q gi|254780186|r 192 HQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGF----------PGKSG-- 259 (311)
Q Consensus 192 ~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGl----------PaKSG-- 259 (311)
--..+-.|+.||++....|.++++ ++++.. ..|.+.-.+.....+.|--|+ ..+.|
T Consensus 156 ~~~g~~sta~Dl~~~~~~l~~~~~--------l~~~~~----~~~~~~~~~~~~~~~~yG~G~~~~~~~~~~~~~~~G~~ 223 (270)
T 1ei5_A 156 GDAGICASLNDMIAWEQFIDATRD--------DESGLY----RRLSGPQTFKDGVAAPYGFGLNLHETGGKRLTGHGGAL 223 (270)
T ss_dssp SSSCEEECHHHHHHHHHHHHHTTT--------CTTSHH----HHHSSCCBCTTSCBCSEETTEEEEEETTEEEEEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCC--------CCHHHH----HHHHCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCC
T ss_conf 776410599999999999867999--------988999----99719721368987863637999814991799943727
Q ss_pred -CCCEEEEEECCC-CEEEEEC
Q ss_conf -221103343785-1799875
Q gi|254780186|r 260 -VGGGILAIVPSK-ASIAVWS 278 (311)
Q Consensus 260 -VgGgilavvPg~-~gIav~S 278 (311)
-.|..+.+.|.. .+|.+.+
T Consensus 224 gg~~s~~~~~p~~~~~iv~l~ 244 (270)
T 1ei5_A 224 RGWRCQRWHCADERLSTIAMF 244 (270)
T ss_dssp TTEEEEEEEEGGGTEEEEEEE
T ss_pred CCCEEEEEEEECCCEEEEEEE
T ss_conf 882699999977998999999
No 49
>>2jch_A Penicillin-binding protein 1B; peptidoglycan synthesis multifunctional enzyme, cell WALL, peptidoglycan, gamma lactam antibiotics; HET: PL7; 2.4A {Streptococcus pneumoniae} PDB: 2jci_A* 2je5_A* (A:1-134,A:206-387)
Probab=64.67 E-value=0.44 Score=27.40 Aligned_cols=68 Identities=10% Similarity=0.045 Sum_probs=41.9
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC--------------------CCCEECCHHH
Q ss_conf 99999827888899899999999873000079999999999825970777--------------------8875518999
Q gi|254780186|r 169 LANFVRSYGNIRYKIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSL--------------------TNQSVISPLQ 228 (311)
Q Consensus 169 la~~Lk~~g~~~~dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~--------------------t~~~vi~~~~ 228 (311)
+.-+++..|.-.. .+..+.+=+ -=++.+|..+||.+.++|||+|+-.. ..+|+++++.
T Consensus 136 ~~~~~~~~Gi~~~-~~~~~s~al-G~~~~vtplqla~aya~iAN~G~~~~P~~i~~i~d~~G~~~~~~~~~~~~~~s~~~ 213 (316)
T 2jch_A 136 VKGYMEKMGYEIP-EYGIESLPM-GGGIEVTVAQHTNGYQTLANNGVYHQKHVISKIEAADGRVVYEYQDKPVQVYSKAT 213 (316)
T ss_dssp -------------------------------------------------------------CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HHHHHHHHH-HHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 6899875243456-666776899-99998542169999998607432234554432211123124657999999876655
Q ss_pred HHHHHHHHHH
Q ss_conf 9775544541
Q gi|254780186|r 229 SRCVNAVMLT 238 (311)
Q Consensus 229 ~~~v~s~M~T 238 (311)
+..+..+|..
T Consensus 214 a~~~~~~m~~ 223 (316)
T 2jch_A 214 ATIMQGLLRE 223 (316)
T ss_dssp TTTSSCCC--
T ss_pred HHHCCHHHHH
T ss_conf 5402211799
No 50
>>1ci9_A ESTB, protein (carboxylesterase); hydrolase, caboxylesterase; HET: DFP; 1.80A {Burkholderia gladioli} (A:35-376)
Probab=60.77 E-value=6.9 Score=19.65 Aligned_cols=85 Identities=8% Similarity=-0.063 Sum_probs=54.2
Q ss_pred HHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCC--------CC-HHHHHHHHHHCCCCCCCCC-
Q ss_conf 8730000799999999998259707778875518999977554454113--------31-2566789870787156522-
Q gi|254780186|r 192 HQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCG--------HY-DHSGDFAYRVGFPGKSGVG- 261 (311)
Q Consensus 192 ~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcG--------mY-d~SG~fa~~VGlPaKSGVg- 261 (311)
-...+-.|+.||++.+..|.++|.. .++++++.+..+....--.... +. .....+....+...+.|-.
T Consensus 239 ~ag~~~ss~~Dla~~~~~ll~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~G~~g 316 (342)
T 1ci9_A 239 GGAGMYGSADDVLRALEAIRANPGF--LPETLADAARRDQAGVGAETRGPGWGFGYLSAVLDDPAAAGTPQHAGTLQWGG 316 (342)
T ss_dssp TTTCCEECHHHHHHHHHHHHHCSSS--SCHHHHHHHHSCSSCGGGCTTSTTEEECSSSEEESCHHHHTCSSCTTCEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCC--CHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCEECCC
T ss_conf 8752011488899888987604788--83899998742015788777789603401213202765457889998666268
Q ss_pred --CEEEEEECC-CCEEEEEC
Q ss_conf --110334378-51799875
Q gi|254780186|r 262 --GGILAIVPS-KASIAVWS 278 (311)
Q Consensus 262 --GgilavvPg-~~gIav~S 278 (311)
|..+.+.|. ..+|++.+
T Consensus 317 g~~s~~~~~p~~~~~iv~l~ 336 (342)
T 1ci9_A 317 VYGHSWFVDRALGLSVLLLT 336 (342)
T ss_dssp TTTEEEEEEGGGTEEEEEEE
T ss_pred CCCEEEEEEECCCEEEEEEE
T ss_conf 30129999954998999988
No 51
>>2wad_A Penicillin-binding protein 2B; peptidoglycan synthesis, transmembrane, antibiotic resistance, cell shape, peptidoglycan, cell membrane; 2.18A {Streptococcus pneumoniae} PDB: 2wae_A 2waf_A (A:313-538,A:577-680)
Probab=52.61 E-value=2.9 Score=22.11 Aligned_cols=98 Identities=19% Similarity=0.141 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHH---CCCCCCCCC------------CE
Q ss_conf 799999999998259707778875518999977554454113312566789870---787156522------------11
Q gi|254780186|r 199 NCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRV---GFPGKSGVG------------GG 263 (311)
Q Consensus 199 t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~V---GlPaKSGVg------------Gg 263 (311)
+..+++..-..+++ +++.+++++.+.+..+|..-- .+..+..+.++ =+=+|.|-+ |=
T Consensus 212 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~v~~~~~-~~gt~~~~~~~~~~~i~gKTGta~~~~~~~~~~~~~w 283 (330)
T 2wad_A 212 TPMQLAQYVATIAN-------NSESDMAILHQGFYQVSHGTS-PLTTGRAFSDGATVSISGKTGTGESYVAGGQEATNTN 283 (330)
T ss_dssp CHHHHHHHHHHHHT-------TCHHHHHHHHHHHHHHHHCCS-TTCCCGGGTTTCSSCCEEEECC------------CCC
T ss_pred HHHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHCCCC-CCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCEE
T ss_conf 26899999999843-------999999999999999872888-6624340003799889998433463679998667189
Q ss_pred EEEEEC---CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 033437---85179987532077898489999999999994865
Q gi|254780186|r 264 ILAIVP---SKASIAVWSPGLDNSGNSLLGAKALELLAIRTGWS 304 (311)
Q Consensus 264 ilavvP---g~~gIav~SP~LD~~GNSv~G~~~le~ls~~l~l~ 304 (311)
.++-+| .+..++++=+.-+..|.+.++-.+.+.|.+.+.+.
T Consensus 284 fvG~a~~~~p~~~~a~~i~~~~~~~~~~a~~i~~~il~~~~~~~ 327 (330)
T 2wad_A 284 AVAYAPTENPQIAVAVVFPHNTNLTKNVGPAIARDIINLYNQHH 327 (330)
T ss_dssp EEEEESTTSCCEEEEEECTTCCCCSCCHHHHHHHHHHHHHHHHS
T ss_pred EEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999879986999999957984689999999999999998468
No 52
>>1zkj_A CMY-10, extended-spectrum beta-lactamase; plasmid, class C, hydrolase; 1.55A {Enterobacter aerogenes} (A:)
Probab=48.86 E-value=13 Score=17.88 Aligned_cols=108 Identities=10% Similarity=-0.067 Sum_probs=61.1
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHH--------HCCCCHHHHHHHHHHCCC----
Q ss_conf 99998730000799999999998259707778875518999977554454--------113312566789870787----
Q gi|254780186|r 188 KFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVML--------TCGHYDHSGDFAYRVGFP---- 255 (311)
Q Consensus 188 d~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~--------TcGmYd~SG~fa~~VGlP---- 255 (311)
....-.+.+..+++|+++.+..+.|+|.- .+++++++...+.....-. .......+..+.|.-|..
T Consensus 217 ~~~~~~gg~~st~~D~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ 294 (359)
T 1zkj_A 217 MLADEAYGIKTSSADLLRFVKANIGGVDD--KALQQAISLTHQGHYSVGGMTQGLGWESYAYPVTEQTLLAGNSAKVILE 294 (359)
T ss_dssp TTHHHHHCCEECHHHHHHHHHHTTTCCSC--HHHHHHHHHTTSCCEEETTEEECSSCEEEESSCCHHHHHHHTSHHHHHS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCCC--HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 54677655017999999999998479975--1456789885243115787544555400356645554446766431234
Q ss_pred -------------------CCCCCCCEEEEEECCCC-EEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf -------------------15652211033437851-7998753207789848999999999999
Q gi|254780186|r 256 -------------------GKSGVGGGILAIVPSKA-SIAVWSPGLDNSGNSLLGAKALELLAIR 300 (311)
Q Consensus 256 -------------------aKSGVgGgilavvPg~~-gIav~SP~LD~~GNSv~G~~~le~ls~~ 300 (311)
+-.|-.|-++.+.|... +|++.+=..+ .+-....+.+.|.+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~G~~g~~g~~~~~~p~~~~~iv~l~N~~~---~~~~~~~~~~~i~~~ 356 (359)
T 1zkj_A 295 ANPTAAPRESGSQVLFNKTGSTNGFGAYVAFVPARGIGIVMLANRNY---PIEARIKAAHAILAQ 356 (359)
T ss_dssp CEECBCCCC---CEEEEEEEEETTEEEEEEEEGGGTEEEEEEESBCC---CHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCEEEEEEECCCC---CCHHHHHHHHHHHHH
T ss_conf 66656655789845998247788741999999889969999975999---958999999999998
No 53
>>1msw_D DNA-directed RNA polymerase, bacteriophage T7 RNA; T7RNAP elongation complex, transcription/DNA/RNA complex; 2.10A {Enterobacteria phage T7} (D:67-247)
Probab=45.77 E-value=21 Score=16.46 Aligned_cols=63 Identities=13% Similarity=0.189 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHCEEE-EEECCCCEEEECCCCCCCCHHHHHHHH
Q ss_conf 99999999999776079999982833205982470289-980899788766878640199999999
Q gi|254780186|r 4 KKIIDGIYEEIKPQIGQGRVADYIPELAKVRIDHFGMS-LALEDGTVYSVGESEFLFSIQSISKVF 68 (311)
Q Consensus 4 ~~~l~~~~~~~~~~~~~G~vA~YIP~La~vdp~~fgia-i~t~dG~~~~~GD~~~~FsiqSisK~f 68 (311)
.+.|++..++.+. ..|+-+.|-|.|..+||+.+++- |..+-+...+.|.........+|.+-+
T Consensus 16 ~~~i~~~i~~~~~--~~~~r~~y~pyL~~l~~e~lA~Iti~~~l~~l~~~~g~~~~~l~~~iG~aV 79 (181)
T 1msw_D 16 IARINDWFEEVKA--KRGKRPTAFQFLQEIKPEAVAYITIKTTLACLTSADNTTVQAVASAIGRAI 79 (181)
T ss_dssp HHHHHHHHHHHHH--SCSCCCTTTTTTTSSCHHHHHHHHHHHHHHHHHHCSCCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 9999999999861--358750778988559988999999999999864789970999999999999
No 54
>>2do9_A NALP10, nacht-, LRR- and PYD-containing protein 10; apoptosis, inflammation, structural genomics, NPPSFA; NMR {Mus musculus} (A:)
Probab=44.25 E-value=23 Score=16.31 Aligned_cols=67 Identities=12% Similarity=0.158 Sum_probs=51.8
Q ss_pred HHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9999999611289999946576567720444201148984763111379999986448888899999999999987
Q gi|254780186|r 68 FLLTIALRKFDEEIWKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENFLNFMRGI 143 (311)
Q Consensus 68 f~l~~al~~~G~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~~l 143 (311)
+.|.-.|+++.++=|++ |-+...=+.....|+..+-+|..+-+++++......+..|+..++.++++
T Consensus 18 ~~Ll~~Le~L~~~Elk~---------FK~~L~~~~~~~Ip~~~le~a~~~~lAdlLv~~y~~~~A~~vti~il~~i 84 (115)
T 2do9_A 18 EALLWALNDLEENSFKT---------LKFHLRDVTQFHLARGELESLSQVDLASKLISMYGAQEAVRVVSRSLLAM 84 (115)
T ss_dssp HHHHHHHHHSCHHHHHH---------HHHHHHHHHCSSCCSSSTTTCCTTHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---------HHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHC
T ss_conf 99999999725999999---------99987418778988899861899889999999868889999999999983
No 55
>>1z6f_A Penicillin-binding protein 5; peptidoglycan synthesis, DD- carboxypeptidase, hydrolase, boronic acid; HET: BO9; 1.60A {Escherichia coli} (A:36-180)
Probab=41.91 E-value=9.8 Score=18.68 Aligned_cols=24 Identities=8% Similarity=0.070 Sum_probs=21.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 786401999999999999996112
Q gi|254780186|r 55 SEFLFSIQSISKVFLLTIALRKFD 78 (311)
Q Consensus 55 ~~~~FsiqSisK~f~l~~al~~~G 78 (311)
++.+|++.|++|..+...++++..
T Consensus 1 Ad~~~p~AS~~Kl~~~~~~l~~v~ 24 (145)
T 1z6f_A 1 ADVRRDPASLTKMMTSYVIGQAMK 24 (145)
T ss_dssp TTCCBCCGGGHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 099807389999999999999987
No 56
>>1pn5_A Nacht-, LRR- and PYD-containing protein 2; alpha-helix bundle, apoptosis; NMR {Homo sapiens} (A:)
Probab=39.29 E-value=18 Score=16.97 Aligned_cols=89 Identities=15% Similarity=0.144 Sum_probs=64.2
Q ss_pred CCCCEEEECCCCCCCCHHHHH----HHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHH---HHC-CCCCCCCCCHHHHH
Q ss_conf 899788766878640199999----9999999996112899999465765677204442---011-48984763111379
Q gi|254780186|r 45 EDGTVYSVGESEFLFSIQSIS----KVFLLTIALRKFDEEIWKRVGREPSGSSFDSIVQ---LEN-ENGIPRNPFVNAGA 116 (311)
Q Consensus 45 ~dG~~~~~GD~~~~FsiqSis----K~f~l~~al~~~G~~V~~~VG~ePSg~~FNSi~~---Le~-~~g~P~NPmiNAGA 116 (311)
+|| .++.-+....|+....+ .-+.|.-.|+++.++=|++ |-+... ++. ....|+..+=+|..
T Consensus 39 ~~~-~~~~d~~~~~~~~~~m~ma~~~~~~Ll~~LE~L~~eELkk---------FK~~L~~~~le~g~~~Ipr~~LE~Ad~ 108 (159)
T 1pn5_A 39 VDG-EWTYDDATKTFTVTEGSMAGGAWGRLACYLEFLKKEELKE---------FQLLLANKAHSRSSSGETPAQPEKTSG 108 (159)
T ss_dssp ---------------------CCCSSCTTHHHHHHHCCHHHHHH---------HHHHHHHHCTTCCSSCSCSSCCCCCSH
T ss_pred CCC-EEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHH---------HHHHHCCCCCCCCCCCCCHHHHHCCCH
T ss_conf 885-4661366215787406756651779999999657999999---------999974276344899998799703999
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999986448888899999999999987
Q gi|254780186|r 117 IVVSDAVLGSSSADDAIENFLNFMRGI 143 (311)
Q Consensus 117 I~~~sli~~~~~~~~~~~~i~~~~~~l 143 (311)
+-+++++......+..++..++.++++
T Consensus 109 ~dLAdLLv~~yge~~A~~vti~Il~kM 135 (159)
T 1pn5_A 109 MEVASYLVAQYGEQRAWDLALHTWEQM 135 (159)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHC
T ss_conf 899999999769689999999999984
No 57
>>1qme_A Penicillin-binding protein 2X; peptidoglycan synthesis, resistance, cell WALL, transmembrane; 2.4A {Streptococcus pneumoniae} (A:1-217,A:410-455)
Probab=35.08 E-value=16 Score=17.27 Aligned_cols=24 Identities=13% Similarity=0.030 Sum_probs=21.3
Q ss_pred HHHHHCCH-HHHHHHHHHHHCCCCC
Q ss_conf 73000079-9999999998259707
Q gi|254780186|r 193 QCSLMMNC-VQLAKSGLYLAFRGYN 216 (311)
Q Consensus 193 ~Csi~~t~-~dLA~~~a~LAn~G~~ 216 (311)
-+.+..|. -+||.+.+++||+|.-
T Consensus 210 G~~v~LTIplQ~~~~~~aiaN~G~~ 234 (263)
T 1qme_A 210 GKDVYTTIQTQMIRAFTAIANDGVM 234 (263)
T ss_dssp CCEEEESCHHHHHHHHHHHHTTTCE
T ss_pred CCCEEEEEHHHHHHHHHHHHCCCEE
T ss_conf 9735997799999999999719859
No 58
>>2po4_A Virion RNA polymerase; right hand shape, transferase; 2.00A {Enterobacteria phage N4} PDB: 3c2p_A 3c3l_A 3c46_A (A:609-803)
Probab=34.49 E-value=32 Score=15.33 Aligned_cols=77 Identities=22% Similarity=0.351 Sum_probs=51.3
Q ss_pred HHHCCCCCCCCCCH----HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC-CCHHHHHHHHHH
Q ss_conf 20114898476311----1379999986448888899999999999987289986247899998511-241279999999
Q gi|254780186|r 99 QLENENGIPRNPFV----NAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIE-TGYRNFALANFV 173 (311)
Q Consensus 99 ~Le~~~g~P~NPmi----NAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~-t~~rN~ala~~L 173 (311)
.||.+.|+..||+. -+||--++.-+.. +-.+.-++++-+.++.-+.++.+.--.++|..... .+|...-+|.||
T Consensus 53 alelkrgiaknpltitiygsgargiagklvs-svtdaiyermsdvlkarakdpnisaamamfgkqaaseahaeellarfl 131 (195)
T 2po4_A 53 ALELKRGIAKNPLTITIYGSGARGIAGKLVS-SVTDAIYERMSDVLKARAKDPNISAAMAMFGKQAASEAHAEELLARFL 131 (195)
T ss_dssp TTSCCCCCCCCHHHHHHTTCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCTTSCHHHHHHTTSCSSHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCEEEEECCCCCCHHHHHHH-HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5454225456982587425654210122268-889999999877765213687535777653001022344778898987
Q ss_pred HHC
Q ss_conf 827
Q gi|254780186|r 174 RSY 176 (311)
Q Consensus 174 k~~ 176 (311)
|..
T Consensus 132 kdm 134 (195)
T 2po4_A 132 KDM 134 (195)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 778
No 59
>>2z3g_A Blasticidin-S deaminase; hydrolase, cytidine deaminase family, zinc, tetramer; HET: TRE; 1.50A {Aspergillus terreus} (A:)
Probab=33.99 E-value=33 Score=15.28 Aligned_cols=45 Identities=13% Similarity=0.164 Sum_probs=30.4
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHC--EEEEEECCCCEEEECCCC
Q ss_conf 99799999999999776079999982833205982470--289980899788766878
Q gi|254780186|r 1 MDLKKIIDGIYEEIKPQIGQGRVADYIPELAKVRIDHF--GMSLALEDGTVYSVGESE 56 (311)
Q Consensus 1 md~~~~l~~~~~~~~~~~~~G~vA~YIP~La~vdp~~f--giai~t~dG~~~~~GD~~ 56 (311)
|++.+..+++++.++...+ +..+...| |.++.|.||++|.--..+
T Consensus 1 m~l~~~~~~L~~~A~~a~~-----------a~~PyS~f~VgAa~~t~~G~i~~G~nvE 47 (130)
T 2z3g_A 1 MPLSQEESTLIERATATIN-----------SIPISEDYSVASAALSSDGRIFTGVNVY 47 (130)
T ss_dssp -CCCHHHHHHHHHHHHHHH-----------HSCCCSSSCEEEEEEETTSCEEEEECCC
T ss_pred CCCCHHHHHHHHHHHHHHH-----------CCCCCCCCCEEEEEEECCCCEEEEEEEC
T ss_conf 9889899999999999985-----------3698889868999994899999986212
No 60
>>1fbv_A Signal transduction protein CBL; CBL, ZAP-70, phosphorylation, tyrosine kinase, ubiquitination, protein degradation,, ligase; HET: PTR; 2.90A {Homo sapiens} (A:222-307)
Probab=30.65 E-value=37 Score=14.93 Aligned_cols=39 Identities=15% Similarity=0.250 Sum_probs=33.5
Q ss_pred CCCCCCCCHHHHCCCHHHCEEEEEECCCCEEEECCCCCC
Q ss_conf 999998283320598247028998089978876687864
Q gi|254780186|r 20 QGRVADYIPELAKVRIDHFGMSLALEDGTVYSVGESEFL 58 (311)
Q Consensus 20 ~G~vA~YIP~La~vdp~~fgiai~t~dG~~~~~GD~~~~ 58 (311)
.-|.-+||=.|......+|+|.-++.||+++..=-.+++
T Consensus 18 ~~kpGSYiFRlSCTRlGQWAIGyVt~dg~IlQTIp~nk~ 56 (86)
T 1fbv_A 18 IHKPGSYIFRLSCTRLGQWAIGYVTADGNILQTIPHNKP 56 (86)
T ss_dssp TTSTTEEEEEECSSSTTSEEEEEECTTSCEEEECCCSSC
T ss_pred CCCCCCEEEEECCCCCCCEEEEEECCCCCEEEECCCCCH
T ss_conf 469971799732576674589998688865532367748
No 61
>>3hzs_A Monofunctional glycosyltransferase; transglycosylase, peptidoglycan, moenomycin, cell membrane, cell shape; HET: M0E; 2.10A {Staphylococcus aureus subsp} (A:1-47,A:126-209)
Probab=30.28 E-value=37 Score=14.89 Aligned_cols=68 Identities=15% Similarity=0.051 Sum_probs=48.6
Q ss_pred CCCCCCCHHHHHHHHHHHHH-------HHCCHHHHHHHHHHHHC-CCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHH
Q ss_conf 78888998999999998730-------00079999999999825-970777887551899997755445411331256
Q gi|254780186|r 176 YGNIRYKIEDVLKFYFHQCS-------LMMNCVQLAKSGLYLAF-RGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHS 245 (311)
Q Consensus 176 ~g~~~~dv~~~Ld~Yf~~Cs-------i~~t~~dLA~~~a~LAn-~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~S 245 (311)
++.+++ ++.+-..||..-+ -.+|..+.|.+++.+-+ .-.+|.....- ..+-...|+..|...|.-+.+
T Consensus 46 ~~GiYG-VeAAAr~YFGKsA~~~~~~psdLs~aEaA~LAgll~aPs~Y~P~~npe~-ak~Rr~~VL~rM~~~g~Is~~ 121 (131)
T 3hzs_A 46 YNNQYT-LEGAANHYFGTTVNKNSTTMSHITVLQSAILASKVNAPSVYNINNMSEN-FTQRVSTNLEKMKQQNYINET 121 (131)
T ss_dssp TTTBCS-HHHHHHHHHSCBCCTTCSSSCBCCHHHHHHHHHHTTSTTTCCSSSCCHH-HHHHHHHHHHHHHHTTSSCHH
T ss_pred CCCCCH-HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHH-HHHHHHHHHHHHHHCCCCCHH
T ss_conf 568513-9999999959891013434588999999998722589775898679899-999999999999986998999
No 62
>>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} (B:246-329)
Probab=30.06 E-value=38 Score=14.86 Aligned_cols=39 Identities=15% Similarity=0.250 Sum_probs=33.6
Q ss_pred CCCCCCCCHHHHCCCHHHCEEEEEECCCCEEEECCCCCC
Q ss_conf 999998283320598247028998089978876687864
Q gi|254780186|r 20 QGRVADYIPELAKVRIDHFGMSLALEDGTVYSVGESEFL 58 (311)
Q Consensus 20 ~G~vA~YIP~La~vdp~~fgiai~t~dG~~~~~GD~~~~ 58 (311)
.-|.-+||=.|......+|+|.-++.||+++..=-.+++
T Consensus 18 ~~kpGSYiFRlSCTRlGQWAIGyVt~dg~IlQTIp~nk~ 56 (84)
T 3bux_B 18 IHKPGSYIFRLSCTRLGQWAIGYVTADGNILQTIPHNKP 56 (84)
T ss_dssp TTSTTEEEEEECSSSTTSEEEEEECTTSCEEEECCSSCC
T ss_pred HCCCCCEEEEECCCCCCCEEEEEECCCCCEEEECCCCCH
T ss_conf 439971798611442253368998688866543489857
No 63
>>2yu0_A Interferon-activable protein 205; PAAD_dapin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} (A:)
Probab=29.59 E-value=23 Score=16.22 Aligned_cols=64 Identities=16% Similarity=0.295 Sum_probs=47.7
Q ss_pred HHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 999996112899999465765677204442011489847631113799999864488888999999999999872
Q gi|254780186|r 70 LTIALRKFDEEIWKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENFLNFMRGIA 144 (311)
Q Consensus 70 l~~al~~~G~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~~la 144 (311)
|.-.|++++++=|++ |-+. |..+...|+..+-+|..+-+++++......+..++..++.++++-
T Consensus 10 Ll~~LE~L~~~elk~---------FK~~--L~~~~~ip~~~le~ad~~dladll~~~y~~~~a~~~t~~il~~mn 73 (94)
T 2yu0_A 10 LLRGLECINKHYFSL---------FKSL--LARDLNLERDNQEQYTTIQIANMMEEKFPADSGLGKLIEFCEEVP 73 (94)
T ss_dssp TTTTTTTSCHHHHHH---------HHHH--HHTTTCCCSSCSSSCCHHHHHHHHHHHCTTTTTHHHHHHHHHHST
T ss_pred ECCCCCHHHHHHHHH---------HHHH--HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCH
T ss_conf 100410553888999---------9999--997604553568775699999999986777421899999998466
No 64
>>1lfd_A Ralgds; RAL, effector interaction; HET: GNP; 2.10A {Rattus norvegicus} (A:)
Probab=29.47 E-value=31 Score=15.41 Aligned_cols=38 Identities=5% Similarity=0.143 Sum_probs=32.0
Q ss_pred HCCCHHHCEEEEEECCCCEEEECCCCCCCCHHHHHHHH
Q ss_conf 05982470289980899788766878640199999999
Q gi|254780186|r 31 AKVRIDHFGMSLALEDGTVYSVGESEFLFSIQSISKVF 68 (311)
Q Consensus 31 a~vdp~~fgiai~t~dG~~~~~GD~~~~FsiqSisK~f 68 (311)
.+.||+.|-++-+..+|+..-..|.+.+|.+|+-.+.+
T Consensus 43 ~~~~~~~Y~LvqV~~~~~ErvL~d~e~pl~~~~~w~~~ 80 (87)
T 1lfd_A 43 DEDEPEDYELLQIISEDHKLKIPENANVFYAMNSAANY 80 (87)
T ss_dssp CSSCGGGEEEEEESSSSCEEECCTTSBHHHHSCTTSCC
T ss_pred CCCCCCCEEEEEECCCCCEEECCCCCCEEEEECCCCCC
T ss_conf 97870231899984899779647997178996477675
No 65
>>1qme_A Penicillin-binding protein 2X; peptidoglycan synthesis, resistance, cell WALL, transmembrane; 2.4A {Streptococcus pneumoniae} (A:272-409,A:456-474)
Probab=27.87 E-value=20 Score=16.63 Aligned_cols=125 Identities=11% Similarity=-0.004 Sum_probs=63.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCC---HHHHHHHCCCCCCCCC-HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC-CCCH
Q ss_conf 786401999999999999996112---8999994657656772-0444201148984763111379999986448-8888
Q gi|254780186|r 55 SEFLFSIQSISKVFLLTIALRKFD---EEIWKRVGREPSGSSF-DSIVQLENENGIPRNPFVNAGAIVVSDAVLG-SSSA 129 (311)
Q Consensus 55 ~~~~FsiqSisK~f~l~~al~~~G---~~V~~~VG~ePSg~~F-NSi~~Le~~~g~P~NPmiNAGAI~~~sli~~-~~~~ 129 (311)
++..|+.-|+-|||+++.||++.. +.++.--+....+..+ .+. .+..++.+.++-=.-|++-++=+.= +...
T Consensus 10 ~~~~~~pGStfKp~t~a~aLe~G~~~~~~~~~~~~~~~~g~~~~~~~---~n~~~~~~g~itl~~Al~~S~N~~f~~l~~ 86 (157)
T 1qme_A 10 YQSNYEPGSTMKVMMLAAAIDNNTFPGGEVFNSSELKIADATIRDWD---VNEGLTGGRMMTFSQGFAHSSNVGMTLLEQ 86 (157)
T ss_dssp TSCCBCCGGGGHHHHHHHHHHTTCCCTTCEEECSCEEETTEEECCHH---HHTTSCSCCEEEHHHHHHTTCHHHHHHHHH
T ss_pred EEECCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCEECCCCCCCCC---CCCCCCCCCEEEHHHHCCCCCCHHHHHHHH
T ss_conf 01125775202299899999769732330230134043685210244---676677872001344125233712566654
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999987289986247899998511241279999999827888899
Q gi|254780186|r 130 DDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYK 182 (311)
Q Consensus 130 ~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~d 182 (311)
+--.+.+.++++++=-+.+..++-..-.+-....+...++|+.--..|..-..
T Consensus 87 ~~g~~~~~~~~~~~G~~~~~~~~l~~~~~g~~~~~~~~~~a~~a~GqG~~vT~ 139 (157)
T 1qme_A 87 KMGDATWLDYLNRFKFGVPTRFGLTDEYAGQLPADNIVNIAQSSFGQGISVTS 139 (157)
T ss_dssp HHCHHHHHHHHHHTTTTSCCCCSSSSCCCCBCCCSSHHHHHHGGGTCSCBBCC
T ss_pred HCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
T ss_conf 25843678898860788666888753457768765533333143079866799
No 66
>>1ti6_A Pyrogallol hydroxytransferase large subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} (A:210-416,A:665-691)
Probab=26.98 E-value=43 Score=14.52 Aligned_cols=162 Identities=14% Similarity=0.120 Sum_probs=83.9
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf 84763111379999986448888899999999999987289986247899998511241279999999827888899899
Q gi|254780186|r 106 IPRNPFVNAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIED 185 (311)
Q Consensus 106 ~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~ 185 (311)
.-.+|.-+..|=..+++-.+-....+. ..++..++.+.- + =.+|.+ |..+...++... .+|++.....-+-++|.
T Consensus 37 vvVDPr~t~ta~~~Ad~~i~irPGtD~-al~~al~~~ii~-~-g~~D~~-Fi~~~t~Gfd~~-~~~l~~~~~~~~~t~e~ 111 (234)
T 1ti6_A 37 VFIDPHMNHTARLVADKWFSPKIGTDH-ALSFAIAYTWLK-E-DSYDKE-YVAANAHGFEEW-ADYVLGKTDGTPKTCEW 111 (234)
T ss_dssp EEECSBCCHHHHHHCSEEECCCTTCHH-HHHHHHHHHHHH-T-TCSCHH-HHHHHEESHHHH-HHHHTTTTTSCCCCHHH
T ss_pred EEECCCCCCCHHHHCCCCCCCCCCCHH-HHHHHHHHHHHH-C-CCCCCC-CHHHCCCHHHHH-HHHHHHCCCCCCCCHHH
T ss_conf 998898564046641304057767289-999999999998-8-783343-102203108999-99985023334336666
Q ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC-------CCC--CEECCHHHHHHHHHHHHHCCCCHHHHHHH-HHHCCC
Q ss_conf 99999987300007999999999982597077-------788--75518999977554454113312566789-870787
Q gi|254780186|r 186 VLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNS-------LTN--QSVISPLQSRCVNAVMLTCGHYDHSGDFA-YRVGFP 255 (311)
Q Consensus 186 ~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P-------~t~--~~vi~~~~~~~v~s~M~TcGmYd~SG~fa-~~VGlP 255 (311)
+-+ .| .++.+++..+|..+|.....- +.| ++.-..+.++.+..+++-+|+=-.-|-+. -.-|.|
T Consensus 112 aa~----it--GV~~~~I~~~A~~~a~~~~~~~~~~~~~~~G~~~~~~G~~~~~ai~~L~~LtGigkpGgg~~~~~~g~p 185 (234)
T 1ti6_A 112 AEE----ES--GVPACEIRALARQWAKKNTYLAAGGLGGWGGACRASHGIEWARGMIALATMQGMGKPGSNMWSTTQGVP 185 (234)
T ss_dssp HHH----HH--CSCHHHHHHHHHHHHHSCEEEEETTTTSCCGGGSBTTHHHHHHHHHHHHHHTTTTSTTCEECCSSSCCC
T ss_pred HHH----HC--CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 776----54--998899999999997179759997425556421013277899999999876277768962213677766
Q ss_pred ----------CCCCCCCEEEEEECCCCEEEEECCCCCCC
Q ss_conf ----------15652211033437851799875320778
Q gi|254780186|r 256 ----------GKSGVGGGILAIVPSKASIAVWSPGLDNS 284 (311)
Q Consensus 256 ----------aKSGVgGgilavvPg~~gIav~SP~LD~~ 284 (311)
.+-|.+|..--.-| -|.|+|+.+
T Consensus 186 ~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~ 218 (234)
T 1ti6_A 186 LDYEFYFPGYAEGGISGDCENSTP------DWGPRLNNQ 218 (234)
T ss_dssp CCTTSCCCCGGGCTTSCCTTTSSS------CCCSCGGGS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCC
T ss_conf 555543334234676666565586------557544442
No 67
>>1e25_A Extended-spectrum beta-lactamase PER-1; hydrolase, antibiotic resistance, class A cephalosporinase; 1.9A {Pseudomonas aeruginosa} (A:39-161)
Probab=26.70 E-value=21 Score=16.53 Aligned_cols=34 Identities=24% Similarity=0.309 Sum_probs=23.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCH-H--HHHHHCCCCC
Q ss_conf 64019999999999999961128-9--9999465765
Q gi|254780186|r 57 FLFSIQSISKVFLLTIALRKFDE-E--IWKRVGREPS 90 (311)
Q Consensus 57 ~~FsiqSisK~f~l~~al~~~G~-~--V~~~VG~ePS 90 (311)
.+|++.|++|+++...++++..+ + .-++|-..+.
T Consensus 1 e~~p~AS~~Kl~~a~~~l~~~~~g~i~ld~~v~i~~~ 37 (123)
T 1e25_A 1 EKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIVNRA 37 (123)
T ss_dssp CCEECGGGHHHHHHHHHHHHHHTTSSCTTCEEEEETT
T ss_pred CEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHH
T ss_conf 7064189999999999999886489998665872289
No 68
>>2dbg_A MNDA, myeloid cell nuclear differentiation antigen; interferon induction, DNA-binding, structural genomics, NPPSFA; NMR {Homo sapiens} (A:)
Probab=26.02 E-value=12 Score=18.06 Aligned_cols=73 Identities=12% Similarity=0.211 Sum_probs=54.6
Q ss_pred CHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 19999999999999961128999994657656772044420114898476311137999998644888889999999999
Q gi|254780186|r 60 SIQSISKVFLLTIALRKFDEEIWKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENFLNF 139 (311)
Q Consensus 60 siqSisK~f~l~~al~~~G~~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i~~~ 139 (311)
.+.|..|=+.|.-.|+++.++=|++ |-+. |..+...|+..+-+|..+-+++++......+..|+..++.
T Consensus 7 ~M~~~~~~~~Ll~~Le~L~~~efk~---------FK~~--L~~~~~Ip~~~le~ad~~dla~llv~~y~~~~a~~~t~~i 75 (103)
T 2dbg_A 7 GMVNEYKKILLLKGFELMDDYHFTS---------IKSL--LAYDLGLTTKMQEEYNRIKITDLMEKKFQGVACLDKLIEL 75 (103)
T ss_dssp CCSCHHHHHHHHTTTTTCCHHHHHH---------HHHH--HHHHHCCCHHHHHHSCHHHHHHHHHHHSCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHH---------HHHH--HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 7899888878872323421999999---------9999--9988334456688764999999999876740578999999
Q ss_pred HHHH
Q ss_conf 9987
Q gi|254780186|r 140 MRGI 143 (311)
Q Consensus 140 ~~~l 143 (311)
++++
T Consensus 76 l~~i 79 (103)
T 2dbg_A 76 AKDM 79 (103)
T ss_dssp TSSC
T ss_pred HHHH
T ss_conf 9975
No 69
>>1xp4_A D-alanyl-D-alanine carboxypeptidase; five-stranded antiparallel beta-sheet, omega-like loop, hydrolase; 2.80A {Streptococcus pneumoniae R6} (A:34-212)
Probab=25.60 E-value=19 Score=16.84 Aligned_cols=22 Identities=18% Similarity=0.291 Sum_probs=19.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 6401999999999999996112
Q gi|254780186|r 57 FLFSIQSISKVFLLTIALRKFD 78 (311)
Q Consensus 57 ~~FsiqSisK~f~l~~al~~~G 78 (311)
.+|++.|++|.++...+++...
T Consensus 2 ~~~p~AS~~Kl~~~~~~l~~i~ 23 (179)
T 1xp4_A 2 QPVEIASITKLITVYLVYEALE 23 (179)
T ss_dssp SCEECGGGGHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9893499999999999999987
No 70
>>1qlm_A Methenyltetrahydromethanopterin cyclohydrolase; methanogenesis, biological methanogenesis; 2.0A {Methanopyrus kandleri} (A:60-89,A:173-316)
Probab=24.12 E-value=37 Score=14.93 Aligned_cols=33 Identities=21% Similarity=0.250 Sum_probs=21.3
Q ss_pred HCCCHHHCEEEEEEC----CCCEEEECCCCCCCCHHH
Q ss_conf 059824702899808----997887668786401999
Q gi|254780186|r 31 AKVRIDHFGMSLALE----DGTVYSVGESEFLFSIQS 63 (311)
Q Consensus 31 a~vdp~~fgiai~t~----dG~~~~~GD~~~~FsiqS 63 (311)
-++||..|+=|-+++ .|+.|.+|..+...-.+|
T Consensus 135 ykID~~lFsPA~V~Vndl~tGkt~~~G~~n~~lL~~S 171 (174)
T 1qlm_A 135 YKIDPGVFAPARVVVNDLSTGKTYTAGEINVDVLKES 171 (174)
T ss_dssp GGSCGGGSSCSEEEEEETTTCCEEEEECCCHHHHHHH
T ss_pred HHCCHHHCCCEEEEEEECCCCCEEECCCCCHHHHHHC
T ss_conf 2387633387089999638886455676698999860
No 71
>>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A* (A:384-523)
Probab=23.52 E-value=13 Score=17.82 Aligned_cols=77 Identities=12% Similarity=0.155 Sum_probs=44.1
Q ss_pred CCCHHHHH--HHHHHHH-CCCCCHHHHHHHHHH---HHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 63111379--9999864-488888999999999---99987289986247899998511241279999999827888899
Q gi|254780186|r 109 NPFVNAGA--IVVSDAV-LGSSSADDAIENFLN---FMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYK 182 (311)
Q Consensus 109 NPmiNAGA--I~~~sli-~~~~~~~~~~~~i~~---~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~d 182 (311)
|-.|.+|+ +.+++++ .|..-.++.++.+.. +++..+--.++.=|-..|+.|+..++-+-++..|||++|.=+
T Consensus 9 ~~~iS~g~~~~~~~~~~~mg~~~t~e~~~~~~~~~~l~~~~~~i~RL~NDi~s~~~E~~rg~~~s~I~cyMke~gvse-- 86 (140)
T 2ong_A 9 NSWQSISGPCMLTHIFFRVTDSFTKETVDSLYKYHDLVRWSSFVLRLADDLGTSVEEVSRGDVPKSLQCYMSDYNASE-- 86 (140)
T ss_dssp HHHHHTCHHHHHHHHHHHHSSCCCHHHHHHHTTTCHHHHHHHHHHHHHHHHHSSHHHHHTSCCCCHHHHHHHHTCCCH--
T ss_pred CEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCH--
T ss_conf 504652268999999984787657999974300449999999999981065677868725874037999850699999--
Q ss_pred HHHHHH
Q ss_conf 899999
Q gi|254780186|r 183 IEDVLK 188 (311)
Q Consensus 183 v~~~Ld 188 (311)
|++.+
T Consensus 87 -eeA~~ 91 (140)
T 2ong_A 87 -AEARK 91 (140)
T ss_dssp -HHHHH
T ss_pred -HHHHH
T ss_conf -99999
No 72
>>2olv_A Penicillin-binding protein 2; transpeptidase fold, glycosyltransferase family 51, lysozyme fold; HET: M0E; 2.80A {Staphylococcus aureus} (A:335-435)
Probab=23.08 E-value=22 Score=16.41 Aligned_cols=21 Identities=24% Similarity=0.165 Sum_probs=16.9
Q ss_pred CCCHHHHHHHHH-HHHHHHHCC
Q ss_conf 401999999999-999996112
Q gi|254780186|r 58 LFSIQSISKVFL-LTIALRKFD 78 (311)
Q Consensus 58 ~FsiqSisK~f~-l~~al~~~G 78 (311)
||+.-|.-|||+ |+.|||..+
T Consensus 1 ~~~pGStfKp~~a~a~ale~~~ 22 (101)
T 2olv_A 1 PHPTGSSLKPFLAYGPAIENXK 22 (101)
T ss_dssp CEECGGGGHHHHTHHHHHHHHC
T ss_pred CCCCCCEECCCCCCCCCCCCCC
T ss_conf 5677610022201110135754
No 73
>>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus HB27} PDB: 3bk1_A* (A:138-218,A:380-432)
Probab=20.43 E-value=51 Score=14.00 Aligned_cols=24 Identities=21% Similarity=0.314 Sum_probs=21.4
Q ss_pred CHHHCEEEEEECCCCEEEECCCCC
Q ss_conf 824702899808997887668786
Q gi|254780186|r 34 RIDHFGMSLALEDGTVYSVGESEF 57 (311)
Q Consensus 34 dp~~fgiai~t~dG~~~~~GD~~~ 57 (311)
-|+.+|++|-|.+|.++..||+..
T Consensus 22 Ipga~g~~I~T~~G~IvyTGDfk~ 45 (134)
T 3bk2_A 22 IPDNSGVVIRTPIGTIVHTGDFKL 45 (134)
T ss_dssp SSSCEEEEEEETTEEEEECCSCCC
T ss_pred CCCCCEEEEEECCEEEEEECCCCC
T ss_conf 765412289808857999666235
Done!