HHsearch results for GI: 254780186 and protein with PDBid: 3lo7_A
>3lo7_A PBPA, penicillin-binding protein A; transpeptidase domain, cell membrane, cell shape, cell WALL biogenesis/degradation, membrane; 2.05A {Mycobacterium tuberculosis}
Probab=95.23 E-value=0.069 Score=31.65 Aligned_cols=109 Identities=17% Similarity=0.207 Sum_probs=69.8
Q ss_pred HHHHHHHCCHHHHHHHHHHHHCCCCC--C-------------------CCCCEECCHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 98730000799999999998259707--7-------------------78875518999977554454113312566789
Q gi|254780186|r 191 FHQCSLMMNCVQLAKSGLYLAFRGYN--S-------------------LTNQSVISPLQSRCVNAVMLTCGHYDHSGDFA 249 (311)
Q Consensus 191 f~~Csi~~t~~dLA~~~a~LAn~G~~--P-------------------~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa 249 (311)
+-|=.+.+|.-+||.+.+++||+|+- | ...+|+++++++..+..+|... -...+..+
T Consensus 329 iGqg~~~vTPlqma~a~aaiANgG~~~~P~lV~~i~~~dg~~i~~~~~~~~~~~is~~~a~~l~~~m~~v--~~~~~~~~ 406 (483)
T 3lo7_A 329 IGQKDVALTPLANAEIAATIANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGA--EKVAQQKG 406 (483)
T ss_dssp TTCTTCBBCHHHHHHHHHHHHTTTEEECCBSEEEEECTTCCEEEECCCCEEEECSCHHHHHHHHHHHHHH--HHHSCCTT
T ss_pred ECCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHH--HHHCEECC
T ss_conf 1045544677887776665425983326601456766987532013564332137999999999999754--22200223
Q ss_pred HHHCC--CCCCCCC-----C-------EEEEEECC---CCEEEEEC----CCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 87078--7156522-----1-------10334378---51799875----32077898489999999999994
Q gi|254780186|r 250 YRVGF--PGKSGVG-----G-------GILAIVPS---KASIAVWS----PGLDNSGNSLLGAKALELLAIRT 301 (311)
Q Consensus 250 ~~VGl--PaKSGVg-----G-------gilavvPg---~~gIav~S----P~LD~~GNSv~G~~~le~ls~~l 301 (311)
.--|. -+|.|-. | =.++-.|- +..++||= +.....|.++++-.+-+.+...|
T Consensus 407 ~~~g~~vAGKTGTaq~~~d~~~~~~~aWFvGfaP~~~P~~avaV~ve~g~~~~~~~G~~~AaPI~~~im~~~L 479 (483)
T 3lo7_A 407 AIPGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGRAVIEAAL 479 (483)
T ss_dssp CCTTCCCEEEEEEECCSSCTTTSCCEEEEEEEESTTSCCEEEEEEETTCCCSSSSSSCTTHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 4489779999853225768777787289999977799939999999779978887516999999999999997