HHSEARCH alignment of GI: 254780186 and SCOP domain: d1djaa_

Alignment
>d1djaa_ e.3.1.1 (A:) beta-Lactamase, class A {Staphylococcus aureus [TaxId: 1280]}
Probab=96.00  E-value=0.035  Score=32.03  Aligned_cols=222  Identities=15%  Similarity=0.089  Sum_probs=104.5

Q ss_pred             HHCEEEEEEC-CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCH-HHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHH
Q ss_conf             4702899808-9978876687864019999999999999961128-9999946576567720444201148984763111
Q gi|254780186|r   36 DHFGMSLALE-DGTVYSVGESEFLFSIQSISKVFLLTIALRKFDE-EIWKRVGREPSGSSFDSIVQLENENGIPRNPFVN  113 (311)
Q Consensus        36 ~~fgiai~t~-dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~-~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiN  113 (311)
                      -.+|+++.+. +|+++. =+.+.+|+..|++|++++..++++..+ ++-++|-..++.....+-. +....|.   .+ -
T Consensus        13 ~~~gv~v~dl~tG~~~~-~n~d~~~~~AS~~Kl~~a~~~l~~~~~~~Ld~~v~~~~~~~~~~~~~-~~~~~g~---~~-t   86 (258)
T d1djaa_          13 AHIGVYALDTKSGKEVK-FNSDKRFAYASTSHAINSAILLEQVPYNKLNKKVHINKDDIVAYSPI-LEKYVGK---DI-T   86 (258)
T ss_dssp             CEEEEEEEETTTCCEEE-ESTTSCEECGGGHHHHHHHHHHTSSCGGGTTCEEECCGGGCCSSCTT-GGGGTTS---EE-E
T ss_pred             CEEEEEEEECCCCCEEE-ECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCC-EECCCCC---CC-C
T ss_conf             86999999999998889-88997175589999999999998634367675599609998447982-1136887---41-0


Q ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHH----HHHHH
Q ss_conf             37999998644888889999999999998728998624789999851124127999999982788889989----99999
Q gi|254780186|r  114 AGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIE----DVLKF  189 (311)
Q Consensus       114 AGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~----~~Ld~  189 (311)
                      --.+...-++.+  + ....+.+.+.   + |..                   ..+..++++.|.-...+.    ..-+.
T Consensus        87 ~~~ll~~mi~~S--d-N~Aa~~l~~~---~-G~~-------------------~~~n~~~~~~g~~~t~~~~~~~~~~~~  140 (258)
T d1djaa_          87 LKALIEASMTYS--D-NTANNKIIKE---I-GGI-------------------KKVKQRLKELGDKVTNPVRYEIELNYY  140 (258)
T ss_dssp             HHHHHHHHHHSC--C-HHHHHHHHHH---H-TCH-------------------HHHHHHHHHTTCCSCCCCCCTTGGGCC
T ss_pred             HHHHHHHHHHCC--C-HHHHHHHHHH---H-CCH-------------------HHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             999999998618--3-8999999998---4-899-------------------999999998234431055677766678


Q ss_pred             HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHH--HHCCCCCCCCCC---E-
Q ss_conf             9987300007999999999982597077788755189999775544541133125667898--707871565221---1-
Q gi|254780186|r  190 YFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAY--RVGFPGKSGVGG---G-  263 (311)
Q Consensus       190 Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~--~VGlPaKSGVgG---g-  263 (311)
                      ......-..|.+|++++..-|.++        ..+++...+....+|...--...-.....  .+.+-.|+|-.+   . 
T Consensus       141 ~~~~~~n~tta~d~a~ll~~l~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~KtG~~~~~g~~  212 (258)
T d1djaa_         141 SPKSKKDTSTPAAFGKTLNKLIAN--------GKLSKENKKFLLDLMLNNKSGDTLIKDGVPKDYKVADKSGQAITYASR  212 (258)
T ss_dssp             CTTCCTTEECHHHHHHHHHHHTTS--------SSCCHHHHHHHHHHHHHCSTTTTTHHHHSCTTCEEEEEEEECSSTTCE
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHC--------CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCE
T ss_conf             898765422799999999999848--------767889999999998558416544423468786688516645677723


Q ss_pred             -EEEEE--CCC---CEEEEEC--CCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             -03343--785---1799875--32077898489999999999994
Q gi|254780186|r  264 -ILAIV--PSK---ASIAVWS--PGLDNSGNSLLGAKALELLAIRT  301 (311)
Q Consensus       264 -ilavv--Pg~---~gIav~S--P~LD~~GNSv~G~~~le~ls~~l  301 (311)
                       -.++|  |++   .-|+|+.  |.-+...+    ..++..+++.+
T Consensus       213 ~d~giv~~~~~~~~~vi~v~~~~~~~~~~~~----~~li~~i~~~v  254 (258)
T d1djaa_         213 NDVAFVYPKGQSEPIVLVIFTNKDNKSDKPN----DKLISETAKSV  254 (258)
T ss_dssp             EEEEEEECTTCCSCEEEEEEEECSSTTCCCC----THHHHHHHHHH
T ss_pred             EEEEEEEECCCCCEEEEEEEECCCCCCHHHH----HHHHHHHHHHH
T ss_conf             5799999789984799999958998674789----99999999999


SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: beta-lactamase/transpeptidase-like
superfamily: beta-lactamase/transpeptidase-like
family: beta-Lactamase/D-ala carboxypeptidase
domain: beta-Lactamase, class A
species: Staphylococcus aureus [TaxId: 1280]