HHSEARCH alignment of GI: 254780186 and SCOP domain: d1vqqa3

Alignment
>d1vqqa3 e.3.1.1 (A:328-668) Penicillin binding protein 2a (PBP2A), C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=95.40  E-value=0.027  Score=32.81  Aligned_cols=92  Identities=20%  Similarity=0.163  Sum_probs=63.5

Q ss_pred             HHHHHHHHHHHHCCHHHHHHHHHHHHCCCC-----------CCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
Q ss_conf             999999873000079999999999825970-----------777887551899997755445411331256678987078
Q gi|254780186|r  186 VLKFYFHQCSLMMNCVQLAKSGLYLAFRGY-----------NSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGF  254 (311)
Q Consensus       186 ~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~-----------~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGl  254 (311)
                      ....=+-|=.+.+|.-+||.+.+++||+|+           ++...++++++++++.++..|... +-+.+|..++.-|.
T Consensus       187 ~~~~s~G~G~~~vTplqma~aya~iAn~G~~~~P~~i~~i~~~~~~~~~~s~~~~~~v~~~m~~v-v~~gt~~~~~~~~~  265 (341)
T d1vqqa3         187 LADSGYGQGEILINPVQILSIYSALENNGNINAPHLLKDTKNKVWKKNIISKENINLLTDGMQQV-VNKTHKEDIYRSYA  265 (341)
T ss_dssp             HHHHHTTCSSCBBCHHHHHHHHHGGGTTTCEECCBCBTTSCCCEEECCCSCHHHHHHHHHHHHHH-HHTTTTTTTCCTTS
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCC-CCCCCCCCCCCCCC
T ss_conf             22112222210105347777875551176522212200013432312222034432322013121-23456654447776


Q ss_pred             C--CCCCCC-------------CEEEEEECC--CCEEEEEC
Q ss_conf             7--156522-------------110334378--51799875
Q gi|254780186|r  255 P--GKSGVG-------------GGILAIVPS--KASIAVWS  278 (311)
Q Consensus       255 P--aKSGVg-------------GgilavvPg--~~gIav~S  278 (311)
                      |  +|+|-+             +-.++.-|.  +..++||=
T Consensus       266 ~vaGKTGTaq~~~~~~~~~~~~~wfvGf~~~~P~~~~~V~v  306 (341)
T d1vqqa3         266 NLIGKSGTAELKMKQGETGRQIGWFISYDKDNPNMMMAINV  306 (341)
T ss_dssp             CEEEEEEEEECC------CCEEEEEEEEETTSCSCEEEEEE
T ss_pred             CCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEE
T ss_conf             51058706886145788799559999971799949999999


SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: beta-lactamase/transpeptidase-like
superfamily: beta-lactamase/transpeptidase-like
family: beta-Lactamase/D-ala carboxypeptidase
domain: Penicillin binding protein 2a (PBP2A), C-terminal domain
species: Staphylococcus aureus [TaxId: 1280]