HHSEARCH alignment of GI: 254780186 and SCOP domain: d2dcfa1

Alignment
>d2dcfa1 e.3.1.1 (A:5-392) 6-aminohexanoate-dimer hydrolase NylC {Flavobacterium sp. [TaxId: 239]}
Probab=96.12  E-value=0.02  Score=33.66  Aligned_cols=109  Identities=19%  Similarity=0.062  Sum_probs=68.4

Q ss_pred             HHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHH-----HHHHH-----HHCCC----CC
Q ss_conf             873000079999999999825970777887551899997755445411331256-----67898-----70787----15
Q gi|254780186|r  192 HQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHS-----GDFAY-----RVGFP----GK  257 (311)
Q Consensus       192 ~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~S-----G~fa~-----~VGlP----aK  257 (311)
                      -.|.+..|++|+|+++..+.|+|+  +.|+|+++++.++...+--....+.+..     .++.|     ..+-+    ..
T Consensus       261 ~~ggl~~tarDlarfg~l~l~~G~--~~g~qils~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Yg~~ww~~~~~~~~~~~  338 (388)
T d2dcfa1         261 ANGGVSCTARDLARVGRMMLDGGV--APGGRVVSEDWVRRVLAGGSHEAMTDKGFTNTFPDGSYTRQWWCTGNERGNVSG  338 (388)
T ss_dssp             TTTCEEECHHHHHHHHHHHHTTTE--ETTEECSCHHHHHHHHHCCCTTTCCCHHHHHHCTTCEEETTEEECCCTTCCEEE
T ss_pred             CCCHHHHCCCCHHHHHHHHHHCCC--CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEE
T ss_conf             100323132214577788874885--488605649999998568972001245656678999978645516999970898


Q ss_pred             CCCCCEEEEEECCC-CEEEEECCCCCCCCCCHHHH--HHHHHHHHHHC
Q ss_conf             65221103343785-17998753207789848999--99999999948
Q gi|254780186|r  258 SGVGGGILAIVPSK-ASIAVWSPGLDNSGNSLLGA--KALELLAIRTG  302 (311)
Q Consensus       258 SGVgGgilavvPg~-~gIav~SP~LD~~GNSv~G~--~~le~ls~~l~  302 (311)
                      +|.+|-.+-|.|.. +.|+.+|=.-|.......-+  .+++.+.+.+.
T Consensus       339 ~G~~GQ~i~vdP~~~lvIV~ls~~~~~~~~~~~~~~~~i~~~i~~~l~  386 (388)
T d2dcfa1         339 IGIHGQNLWLDPLTDSVIVKLSSWPDPDTEHWHRLQNGILLDVSRALD  386 (388)
T ss_dssp             EETTTEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHHHHHTS
T ss_pred             ECCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             877896899990699899995999999854689999999999999972


SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: beta-lactamase/transpeptidase-like
superfamily: beta-lactamase/transpeptidase-like
family: beta-Lactamase/D-ala carboxypeptidase
domain: 6-aminohexanoate-dimer hydrolase NylC
species: Flavobacterium sp. [TaxId: 239]