Query gi|254780186|ref|YP_003064599.1| glutaminase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 311
No_of_seqs 127 out of 540
Neff 5.0
Searched_HMMs 13730
Date Mon May 23 08:41:43 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780186.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u60a_ e.3.1.2 (A:) Probable 100.0 0 0 897.0 29.9 304 2-308 5-309 (309)
2 d1mkia_ e.3.1.2 (A:) Probable 100.0 0 0 881.8 29.4 299 6-306 18-328 (328)
3 d2olua2 e.3.1.1 (A:293-692) Pe 97.3 5.3E-05 3.8E-09 50.4 2.9 85 193-278 206-330 (400)
4 d2bg1a1 e.3.1.1 (A:337-789) Pe 96.8 0.0021 1.6E-07 39.9 6.8 84 194-278 222-340 (453)
5 d2c5wb1 e.3.1.1 (B:266-650) Pe 96.5 0.0048 3.5E-07 37.6 7.3 104 194-299 209-359 (385)
6 d2dcfa1 e.3.1.1 (A:5-392) 6-am 96.1 0.02 1.4E-06 33.7 8.5 109 192-302 261-386 (388)
7 d1djaa_ e.3.1.1 (A:) beta-Lact 96.0 0.035 2.5E-06 32.0 9.3 222 36-301 13-254 (258)
8 d1m40a_ e.3.1.1 (A:) beta-Lact 95.8 0.07 5.1E-06 30.1 12.1 212 38-301 19-259 (263)
9 d1vqqa3 e.3.1.1 (A:328-668) Pe 95.4 0.027 1.9E-06 32.8 6.8 92 186-278 187-306 (341)
10 d1pyya4 e.3.1.1 (A:264-631) Pe 94.0 0.013 9.6E-07 34.8 2.4 67 195-261 190-288 (368)
11 d1nrfa_ e.3.1.1 (A:) Penicilli 92.8 0.32 2.3E-05 25.8 10.6 94 193-304 139-245 (246)
12 d1k38a_ e.3.1.1 (A:) Class D b 91.4 0.23 1.7E-05 26.7 5.8 99 190-303 134-238 (241)
13 d1o7ea_ e.3.1.1 (A:) beta-Lact 89.6 0.063 4.6E-06 30.4 1.6 223 27-300 11-261 (267)
14 d1i2sa_ e.3.1.1 (A:) beta-Lact 88.0 0.095 6.9E-06 29.2 1.7 213 37-300 13-250 (255)
15 d1buea_ e.3.1.1 (A:) beta-Lact 87.3 0.22 1.6E-05 26.8 3.2 217 37-301 18-260 (265)
16 d1n9ba_ e.3.1.1 (A:) beta-Lact 85.3 0.37 2.7E-05 25.3 3.5 214 39-301 20-259 (265)
17 d1k55a_ e.3.1.1 (A:) Class D b 84.7 0.22 1.6E-05 26.9 2.0 100 187-302 130-242 (245)
18 d1iysa_ e.3.1.1 (A:) beta-Lact 84.1 0.15 1.1E-05 28.0 1.0 215 37-302 17-258 (261)
19 d1m6ka_ e.3.1.1 (A:) Class D b 83.1 1.5 0.00011 21.5 11.9 102 186-301 133-246 (251)
20 d1bsga_ e.3.1.1 (A:) beta-Lact 82.7 0.53 3.8E-05 24.4 3.3 207 38-300 18-260 (266)
21 d1e25a_ e.3.1.1 (A:) beta-Lact 82.4 0.31 2.2E-05 25.9 2.1 42 36-78 17-59 (278)
22 d1w5da1 e.3.1.3 (A:5-462) Peni 82.3 0.75 5.5E-05 23.4 4.0 48 36-83 20-69 (458)
23 d2cc1a1 e.3.1.1 (A:27-293) bet 80.2 0.71 5.2E-05 23.5 3.3 209 38-301 18-257 (262)
24 d1g6aa_ e.3.1.1 (A:) beta-Lact 79.3 0.66 4.8E-05 23.7 2.9 215 37-300 20-259 (266)
25 d2drwa1 e.3.1.1 (A:2-363) D-Am 79.1 1.6 0.00012 21.2 4.8 57 2-76 2-72 (362)
26 d1onha_ e.3.1.1 (A:) AMPC beta 79.1 1.5 0.00011 21.4 4.7 23 54-76 54-76 (363)
27 d1w79a1 e.3.1.3 (A:1-467) D-al 76.9 1.3 9.5E-05 21.8 3.8 48 36-83 21-70 (467)
28 d1es5a_ e.3.1.1 (A:) D-ala car 74.2 2.7 0.0002 19.8 6.9 103 39-144 9-127 (260)
29 d1ci9a_ e.3.1.1 (A:) Esterase 69.6 2.7 0.0002 19.7 4.0 57 3-76 4-74 (377)
30 d2hdsa1 e.3.1.1 (A:4-361) AMPC 68.9 3.5 0.00025 19.0 4.5 68 3-86 5-91 (358)
31 d2ex2a1 e.3.1.3 (A:22-477) DD- 68.7 1.8 0.00013 20.9 3.0 47 37-83 14-62 (456)
32 d1xa1a_ e.3.1.1 (A:) Regulator 68.7 2.3 0.00017 20.2 3.5 94 192-302 139-243 (246)
33 d1tvfa2 e.3.1.1 (A:15-315) Pen 68.0 2.5 0.00018 20.0 3.5 39 39-77 37-75 (301)
34 d3beca2 e.3.1.1 (A:4-262) Peni 59.0 4.5 0.00033 18.3 3.5 39 39-77 16-55 (259)
35 d1ei5a3 e.3.1.1 (A:3-335) D-am 57.7 3.2 0.00023 19.3 2.6 68 39-108 22-110 (333)
36 d1yqsa1 e.3.1.1 (A:3-347) D-al 51.3 4.5 0.00033 18.3 2.5 76 195-278 237-321 (345)
37 d1hy5a_ a.24.11.1 (A:) YopE {Y 47.3 4.2 0.0003 18.5 1.8 30 3-40 3-32 (120)
38 d1xp4a2 e.3.1.1 (A:25-293) D,D 41.5 8.3 0.0006 16.6 2.6 39 39-77 8-46 (269)
39 d2ciwa1 a.39.3.1 (A:0-119) Clo 32.8 6.2 0.00045 17.4 0.8 44 209-255 35-78 (120)
40 d3buxb3 d.93.1.1 (B:264-351) C 32.3 14 0.001 15.1 2.8 39 20-58 22-60 (88)
41 d2ac0a1 b.2.5.2 (A:96-289) p53 24.7 3.4 0.00025 19.1 -1.7 31 243-283 7-37 (194)
42 d1chka_ d.2.1.7 (A:) Endochito 22.0 16 0.0012 14.8 1.3 46 114-159 140-185 (238)
No 1
>d1u60a_ e.3.1.2 (A:) Probable glutaminase YbaS {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=0 Score=897.04 Aligned_cols=304 Identities=37% Similarity=0.617 Sum_probs=296.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC-HH
Q ss_conf 97999999999997760799999828332059824702899808997887668786401999999999999996112-89
Q gi|254780186|r 2 DLKKIIDGIYEEIKPQIGQGRVADYIPELAKVRIDHFGMSLALEDGTVYSVGESEFLFSIQSISKVFLLTIALRKFD-EE 80 (311)
Q Consensus 2 d~~~~l~~~~~~~~~~~~~G~vA~YIP~La~vdp~~fgiai~t~dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G-~~ 80 (311)
+++++|+++++++|+. .+||||||||+||+|||++|||||||+||++|++||++++||||||||||+|++||+++| |+
T Consensus 5 ~l~~~l~~~~~~~~~~-~~GkvA~YIP~La~vdp~~fgiai~t~dG~~~~~GD~~~~F~iqSisK~f~~~lal~~~G~~~ 83 (309)
T d1u60a_ 5 KLQQAVDQAYTQFHSL-NGGQNADYIPFLANVPGQLAAVAIVTCDGNVYSAGDSDYRFALESISKVCTLALALEDVGPQA 83 (309)
T ss_dssp HHHHHHHHHHHHHTTC-CCCBCCCSSHHHHTSCTTCCEEEEEETTSCEEEEESTTCCEECGGGHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHCCC-CCCCCCCCCHHHCCCCHHHEEEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCHHH
T ss_conf 9999999999981548-999788726775088827839999957991895588288660899999999999997679899
Q ss_pred HHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 99994657656772044420114898476311137999998644888889999999999998728998624789999851
Q gi|254780186|r 81 IWKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEI 160 (311)
Q Consensus 81 V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~ 160 (311)
||+|||+||||++|||+++||.++|+|||||||||||++||||.++ ..++||+++++|+++++| +++.+|++||+||+
T Consensus 84 v~~~VG~EPSg~~FNsl~~le~~~g~P~NPmINAGAI~~~sli~~~-~~~~r~~~i~~~~~~~~g-~~l~~d~~v~~SE~ 161 (309)
T d1u60a_ 84 VQDKIGADPTGLPFNSVIALELHGGKPLSPLVNAGAIATTSLINAE-NVEQRWQRILHIQQQLAG-EQVALSDEVNQSEQ 161 (309)
T ss_dssp HHHHTCSCCCSSCTTCHHHHHHTTTCCCCTTSHHHHHHHHHHSCCS-SHHHHHHHHHHHHHHHHC-TTCEECHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHCC-CCCCCCHHHHHHHH
T ss_conf 9998576877788631665203699978952111088987754168-837999999999999649-98745889999987
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCC
Q ss_conf 12412799999998278888998999999998730000799999999998259707778875518999977554454113
Q gi|254780186|r 161 ETGYRNFALANFVRSYGNIRYKIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCG 240 (311)
Q Consensus 161 ~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcG 240 (311)
+|++||||||||||++|+|++||+++||+||||||+++||+|||+||+||||+|+||+|++|+++++++|+++++|+|||
T Consensus 162 ~t~~rN~Ala~~lk~~g~~~~d~~~~Ld~Yf~~CSi~vt~~dlA~~aatLAN~Gv~P~tg~~v~~~~~~r~vls~M~tcG 241 (309)
T d1u60a_ 162 TTNFHNRAIAWLLYSAGYLYCDAMEACDVYTRQCSTLLNTIELATLGATLAAGGVNPLTHKRVLQADNVPYILAEMMMEG 241 (309)
T ss_dssp TTCHHHHHHHHHHHHHTCCCSCHHHHHHHHHHHTTEEECHHHHHHHHHHHHTTSEETTTTEECSCGGGHHHHHHHHHHHT
T ss_pred HCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCC
T ss_conf 42559999999999769988899999999999855560299999999999759938888872437899999999887547
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 31256678987078715652211033437851799875320778984899999999999948656486
Q gi|254780186|r 241 HYDHSGDFAYRVGFPGKSGVGGGILAIVPSKASIAVWSPGLDNSGNSLLGAKALELLAIRTGWSIFDP 308 (311)
Q Consensus 241 mYd~SG~fa~~VGlPaKSGVgGgilavvPg~~gIav~SP~LD~~GNSv~G~~~le~ls~~l~l~iF~~ 308 (311)
|||+||+|+|+||||||||||||||+||||+||||||||+||++||||||+++||.|+++|+||+|+.
T Consensus 242 mYd~SG~fa~~VGlPaKSGVgGgIlavvPg~~gIav~SP~LD~~GNSv~G~~~le~ls~~~~l~iF~g 309 (309)
T d1u60a_ 242 LYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGIAAFSPPLDEDGNSVRGQKMVASVAKQLGYNVFKG 309 (309)
T ss_dssp TGGGHHHHHHHTCSCEEECTTSEEEEEETTTEEEEEECSCBCTTSCBHHHHHHHHHHHHHHTCCTTCC
T ss_pred CCCCCCCHHHEECCEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 75340013650574031277860799947960799988877888887999999999999838232489
No 2
>d1mkia_ e.3.1.2 (A:) Probable glutaminase YbgJ {Bacillus subtilis [TaxId: 1423]}
Probab=100.00 E-value=0 Score=881.81 Aligned_cols=299 Identities=36% Similarity=0.586 Sum_probs=291.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC-HHHHHH
Q ss_conf 9999999997760799999828332059824702899808997887668786401999999999999996112-899999
Q gi|254780186|r 6 IIDGIYEEIKPQIGQGRVADYIPELAKVRIDHFGMSLALEDGTVYSVGESEFLFSIQSISKVFLLTIALRKFD-EEIWKR 84 (311)
Q Consensus 6 ~l~~~~~~~~~~~~~G~vA~YIP~La~vdp~~fgiai~t~dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G-~~V~~~ 84 (311)
.|++|++++|+++++||||||||+||+|||++|||||||+||++|++||++++||||||||||+|++||+++| |+||+|
T Consensus 18 ~l~~~~~~~~~~~~~G~vA~YIP~La~vdp~~fgiai~t~dG~~~~~GD~~~~FsiQSisK~f~l~~al~~~G~~~V~~~ 97 (328)
T d1mkia_ 18 QLHDWVEYYRPFAANGQSANYIPALGKVNDSQLGICVLEPDGTMIHAGDWNVSFTMQSISKVISFIAACMSRGIPYVLDR 97 (328)
T ss_dssp HHHHHHHHHGGGGGGCBCCC---------TTCCEEEEECTTSCEEEEESTTCCEECGGGHHHHHHHHHHHHHCHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHCEEEEEECCCCEEECCCCCCCEEHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_conf 79999999646517998877067761879478689999179968955886886557998999999999997798999999
Q ss_pred HCCCCCCCCCHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC
Q ss_conf 465765677204442011-4898476311137999998644888889999999999998728998624789999851124
Q gi|254780186|r 85 VGREPSGSSFDSIVQLEN-ENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIETG 163 (311)
Q Consensus 85 VG~ePSg~~FNSi~~Le~-~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~ 163 (311)
||+||||+||||+++||. ++|+|||||||||||++||+|.++ ..++||++++.++++++| +++.+|++||+||++|+
T Consensus 98 VG~EPSg~~FNSi~~Le~~~~g~P~NPmINAGAI~~~sll~g~-~~~~r~~~i~~~~~~~~~-~~~~~d~~v~~SE~~t~ 175 (328)
T d1mkia_ 98 VDVEPTGDAFNSIIRLEINKPGKPFNPMINAGALTIASILPGE-SAYEKLEFLYSVMETLIG-KRPRIHEEVFRSEWETA 175 (328)
T ss_dssp CCCCCCSSCTTCCHHHHHSTTCCCSCSSSHHHHHHHHHHSSSS-SHHHHHHHHHHHHHHHHS-SCCCBCHHHHHHHHHHC
T ss_pred HCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCC-CHHHHHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHH
T ss_conf 6768788997338887631589978966670499988740489-868999999999999659-98765789999998603
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCH
Q ss_conf 12799999998278888998999999998730000799999999998259707778875518999977554454113312
Q gi|254780186|r 164 YRNFALANFVRSYGNIRYKIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYD 243 (311)
Q Consensus 164 ~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd 243 (311)
+||||||||||++|+|++||+++||+||||||+++||+|||+||+||||+|+||+|++||++++++|+|+++|+||||||
T Consensus 176 ~rN~AlA~~Lk~~g~~~~dv~~~Ld~Yf~~CSi~~t~~dLA~~~atLAN~G~~P~t~~~vls~~~~~~v~a~M~TcGmYd 255 (328)
T d1mkia_ 176 HRNRALAYYLKETNFLEAEVEETLEVYLKQCAMESTTEDIALIGLILAHDGYHPIRHEQVIPKDVAKLAKALMLTCGMYN 255 (328)
T ss_dssp HHHHHHHHHHHHTTCCSSCHHHHHHHHHHHHTBEECHHHHHHHHHHHHTTTEETTTTEECSCHHHHHHHHHHHHHHTTGG
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCC
T ss_conf 89999999999779988899999999999827035799999999999769968998882568899999999987658742
Q ss_pred HHHHHHHHHCCCCCCCCCCEEEEEECCC----------CEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 5667898707871565221103343785----------17998753207789848999999999999486564
Q gi|254780186|r 244 HSGDFAYRVGFPGKSGVGGGILAIVPSK----------ASIAVWSPGLDNSGNSLLGAKALELLAIRTGWSIF 306 (311)
Q Consensus 244 ~SG~fa~~VGlPaKSGVgGgilavvPg~----------~gIav~SP~LD~~GNSv~G~~~le~ls~~l~l~iF 306 (311)
+||+|||+||||||||||||||+||||+ ||||||||+||++|||+||+++||.||++|+||+|
T Consensus 256 ~SGefa~~VGlPaKSGVgGgIlavvPg~ggi~~~vp~~~gIav~SP~LD~~GNSv~G~~~le~ls~~~~l~iF 328 (328)
T d1mkia_ 256 ASGKYAAFVGVPAKSGVSGGIMALVPPSARREQPFQSGCGIGIYGPAIDEYGNSLTGGMLLKHMAQEWELSIF 328 (328)
T ss_dssp GHHHHHHHTCSCEEECTTSEEEEEECTTTTCSSTTTTCEEEEEECSCBCTTSSBHHHHHHHHHHHHHHTCCCC
T ss_pred CCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 2000477437740016677159996786664544667517999888768888859999999999998487769
No 3
>d2olua2 e.3.1.1 (A:293-692) Penicillin-binding protein 2, PBP2 {Staphylococcus aureus [TaxId: 1280]}
Probab=97.33 E-value=5.3e-05 Score=50.37 Aligned_cols=85 Identities=18% Similarity=0.116 Sum_probs=58.1
Q ss_pred HHHHHCCHHHHHHHHHHHHCCCC-------------------CCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHH-
Q ss_conf 73000079999999999825970-------------------7778875518999977554454113312566789870-
Q gi|254780186|r 193 QCSLMMNCVQLAKSGLYLAFRGY-------------------NSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRV- 252 (311)
Q Consensus 193 ~Csi~~t~~dLA~~~a~LAn~G~-------------------~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~V- 252 (311)
+=++++|..+||.+.++|||+|+ .+.+.+|+++++++..+..+|...---..++..+.--
T Consensus 206 ~g~~~vtplqlA~aya~iANgG~~~~P~~v~~i~~~~g~~v~~~~~~~~v~s~~~a~~l~~~l~~vv~~~Gt~~~~~~~g 285 (400)
T d2olua2 206 GSASEFSPTQLASAFAAIANGGTYNNAHSIQKVVTRDGETIEYDHTSHKAMSDYTAYMLAEMLKGTFKPYGSAYGHGVSG 285 (400)
T ss_dssp CTTCEECHHHHHHHHHHHHTTSEEECCBCEEEEECTTSCEEECCCCEEECSCHHHHHHHHHHHHGGGSTTSTTTTCCCSS
T ss_pred CCCCCCCHHHHHHCCCCEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC
T ss_conf 23456778886400100005964787674011356432322222222221137899999765214335410001113578
Q ss_pred -CCCCCCCCCC-------------------EEEEEECCCCEEEEEC
Q ss_conf -7871565221-------------------1033437851799875
Q gi|254780186|r 253 -GFPGKSGVGG-------------------GILAIVPSKASIAVWS 278 (311)
Q Consensus 253 -GlPaKSGVgG-------------------gilavvPg~~gIav~S 278 (311)
-+.+|+|-+- =.++.-| ++.++||-
T Consensus 286 ~~vagKTGTa~~~~~~~~~~~~~~~~~~daWFvG~~P-~~~~~Vwv 330 (400)
T d2olua2 286 VNMGAKTGTGTYGAETYSQYNLPDNAAKDVWINGFTP-QYTMSVWM 330 (400)
T ss_dssp CCCEEEEEEECCCHHHHHHTTCCTTEESEEEEEEECS-SEEEEEEE
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECC-CEEEEEEE
T ss_conf 1477761114457657654456668764079998369-96999998
No 4
>d2bg1a1 e.3.1.1 (A:337-789) Penicillin-binding protein 1b, transpeptidase domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.77 E-value=0.0021 Score=39.90 Aligned_cols=84 Identities=13% Similarity=0.113 Sum_probs=55.6
Q ss_pred HHHHCCHHHHHHHHHHHHCCCCC--------------------CCCCCEECCHHHHHHHHHHHHHC---CC--CHH---H
Q ss_conf 30000799999999998259707--------------------77887551899997755445411---33--125---6
Q gi|254780186|r 194 CSLMMNCVQLAKSGLYLAFRGYN--------------------SLTNQSVISPLQSRCVNAVMLTC---GH--YDH---S 245 (311)
Q Consensus 194 Csi~~t~~dLA~~~a~LAn~G~~--------------------P~t~~~vi~~~~~~~v~s~M~Tc---Gm--Yd~---S 245 (311)
-.+++|..+||.+.++|||+|+. ....+|+++++.+..+..+|... |. .-. .
T Consensus 222 g~~~vTplqma~ayatiAN~G~~~~P~~i~~i~d~~G~vi~~~~~~~~~vis~~ta~~~~~~L~~VV~~Gtg~~~~~~~~ 301 (453)
T d2bg1a1 222 GGIEVTVAQHTNGYQTLANNGVYHQKHVISKIEAADGRVVYEYQDKPVQVYSKATATIMQGLLREVLSSRVTTTFKSNLT 301 (453)
T ss_dssp TTCCBCHHHHHHHHHHHHTTTEECCCBSEEEEECTTSCEEEECCCCCEECSCHHHHHHHHHHHHHHHHTCSSCCHHHHHH
T ss_pred CCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCC
T ss_conf 31021001112132220269814255011113564323220002222235788899987654565304554310103554
Q ss_pred HHHHHHHCCC--CCCCCCCE-----EEEEECCCCEEEEEC
Q ss_conf 6789870787--15652211-----033437851799875
Q gi|254780186|r 246 GDFAYRVGFP--GKSGVGGG-----ILAIVPSKASIAVWS 278 (311)
Q Consensus 246 G~fa~~VGlP--aKSGVgGg-----ilavvPg~~gIav~S 278 (311)
+..+.--|.| +|+|-+-. .++.-| ...++||-
T Consensus 302 ~~~~~~~~~~vAGKTGTt~~~~DaWFvGytp-~~~~~Vwv 340 (453)
T d2bg1a1 302 SLNPTLANADWIGKTGTTNQDENMWLMLSTP-RLTLGGWI 340 (453)
T ss_dssp HHCHHHHTSCCEEEEECCTTCSEEEEEEECS-SEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEECCC-CEEEEEEE
T ss_conf 4455557876202432788870458996279-85799999
No 5
>d2c5wb1 e.3.1.1 (B:266-650) Penicillin-binding protein 1a, transpeptidase domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.54 E-value=0.0048 Score=37.64 Aligned_cols=104 Identities=19% Similarity=0.181 Sum_probs=70.7
Q ss_pred HHHHCCHHHHHHHHHHHHCCCCC-------------------CCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
Q ss_conf 30000799999999998259707-------------------77887551899997755445411331256678987078
Q gi|254780186|r 194 CSLMMNCVQLAKSGLYLAFRGYN-------------------SLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGF 254 (311)
Q Consensus 194 Csi~~t~~dLA~~~a~LAn~G~~-------------------P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGl 254 (311)
=++.+|..+||.+.+++||+|+. +...+++++++++..+..+|...= -+.+|..++.-|.
T Consensus 209 g~~~~tplqla~aya~iAngG~~~~P~~i~~i~d~~~~~~~~~~~~~~v~s~~~a~~~~~~m~~vv-~~GT~~~a~~~~~ 287 (385)
T d2c5wb1 209 KKYGASSEKMAAAYAAFANGGTYYKPMYIHKVVFSDGSEKEFSNVGTRAMKETTAYMMTDMMKTVL-TYGTGRNAYLAWL 287 (385)
T ss_dssp SSBSCCHHHHHHHHHHHHTTSEEECCBSEEEEEETTSCEEECCCCEEECSCHHHHHHHHHHHHHHH-HHSTTGGGCCTTC
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCCCCC
T ss_conf 852568999999887651476432214301221234442212345542047788888876411013-5775221356565
Q ss_pred C--CCCCCC--------------------CEEEEEECCCCEEEEEC------CCCCCCCCCHHHHHHHHHHHH
Q ss_conf 7--156522--------------------11033437851799875------320778984899999999999
Q gi|254780186|r 255 P--GKSGVG--------------------GGILAIVPSKASIAVWS------PGLDNSGNSLLGAKALELLAI 299 (311)
Q Consensus 255 P--aKSGVg--------------------GgilavvPg~~gIav~S------P~LD~~GNSv~G~~~le~ls~ 299 (311)
| +|+|-+ +=.++.-| +..++||= .+....|-++++-.+-+.+..
T Consensus 288 ~vaGKTGTaq~~~~~~~~~~~~~~~~~~d~WFvG~~P-~~~~~Vwvg~~~~~~~~~~~G~~~Aapi~~~im~~ 359 (385)
T d2c5wb1 288 PQAGKTGTSNYTDEEIENHIKTSQFVAPDELFAGYTR-KYSMAVWTGYSNRLTPLVGNGLTVAAKVYRSMMTY 359 (385)
T ss_dssp CCEEEEEECCCCHHHHHHTCCCSSCEESCEEEEEECS-SEEEEEEEECSSTTSCEEGGGGGHHHHHHHHHHHH
T ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCC-CEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 3135655656666654444355642222059995599-88999999407888876887228899999999999
No 6
>d2dcfa1 e.3.1.1 (A:5-392) 6-aminohexanoate-dimer hydrolase NylC {Flavobacterium sp. [TaxId: 239]}
Probab=96.12 E-value=0.02 Score=33.66 Aligned_cols=109 Identities=19% Similarity=0.062 Sum_probs=68.4
Q ss_pred HHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHH-----HHHHH-----HHCCC----CC
Q ss_conf 873000079999999999825970777887551899997755445411331256-----67898-----70787----15
Q gi|254780186|r 192 HQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHS-----GDFAY-----RVGFP----GK 257 (311)
Q Consensus 192 ~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~S-----G~fa~-----~VGlP----aK 257 (311)
-.|.+..|++|+|+++..+.|+|+ +.|+|+++++.++...+--....+.+.. .++.| ..+-+ ..
T Consensus 261 ~~ggl~~tarDlarfg~l~l~~G~--~~g~qils~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Yg~~ww~~~~~~~~~~~ 338 (388)
T d2dcfa1 261 ANGGVSCTARDLARVGRMMLDGGV--APGGRVVSEDWVRRVLAGGSHEAMTDKGFTNTFPDGSYTRQWWCTGNERGNVSG 338 (388)
T ss_dssp TTTCEEECHHHHHHHHHHHHTTTE--ETTEECSCHHHHHHHHHCCCTTTCCCHHHHHHCTTCEEETTEEECCCTTCCEEE
T ss_pred CCCHHHHCCCCHHHHHHHHHHCCC--CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEE
T ss_conf 100323132214577788874885--488605649999998568972001245656678999978645516999970898
Q ss_pred CCCCCEEEEEECCC-CEEEEECCCCCCCCCCHHHH--HHHHHHHHHHC
Q ss_conf 65221103343785-17998753207789848999--99999999948
Q gi|254780186|r 258 SGVGGGILAIVPSK-ASIAVWSPGLDNSGNSLLGA--KALELLAIRTG 302 (311)
Q Consensus 258 SGVgGgilavvPg~-~gIav~SP~LD~~GNSv~G~--~~le~ls~~l~ 302 (311)
+|.+|-.+-|.|.. +.|+.+|=.-|.......-+ .+++.+.+.+.
T Consensus 339 ~G~~GQ~i~vdP~~~lvIV~ls~~~~~~~~~~~~~~~~i~~~i~~~l~ 386 (388)
T d2dcfa1 339 IGIHGQNLWLDPLTDSVIVKLSSWPDPDTEHWHRLQNGILLDVSRALD 386 (388)
T ss_dssp EETTTEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHHHHHTS
T ss_pred ECCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 877896899990699899995999999854689999999999999972
No 7
>d1djaa_ e.3.1.1 (A:) beta-Lactamase, class A {Staphylococcus aureus [TaxId: 1280]}
Probab=96.00 E-value=0.035 Score=32.03 Aligned_cols=222 Identities=15% Similarity=0.089 Sum_probs=104.5
Q ss_pred HHCEEEEEEC-CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCH-HHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHH
Q ss_conf 4702899808-9978876687864019999999999999961128-9999946576567720444201148984763111
Q gi|254780186|r 36 DHFGMSLALE-DGTVYSVGESEFLFSIQSISKVFLLTIALRKFDE-EIWKRVGREPSGSSFDSIVQLENENGIPRNPFVN 113 (311)
Q Consensus 36 ~~fgiai~t~-dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~-~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiN 113 (311)
-.+|+++.+. +|+++. =+.+.+|+..|++|++++..++++..+ ++-++|-..++.....+-. +....|. .+ -
T Consensus 13 ~~~gv~v~dl~tG~~~~-~n~d~~~~~AS~~Kl~~a~~~l~~~~~~~Ld~~v~~~~~~~~~~~~~-~~~~~g~---~~-t 86 (258)
T d1djaa_ 13 AHIGVYALDTKSGKEVK-FNSDKRFAYASTSHAINSAILLEQVPYNKLNKKVHINKDDIVAYSPI-LEKYVGK---DI-T 86 (258)
T ss_dssp CEEEEEEEETTTCCEEE-ESTTSCEECGGGHHHHHHHHHHTSSCGGGTTCEEECCGGGCCSSCTT-GGGGTTS---EE-E
T ss_pred CEEEEEEEECCCCCEEE-ECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCC-EECCCCC---CC-C
T ss_conf 86999999999998889-88997175589999999999998634367675599609998447982-1136887---41-0
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHH----HHHHH
Q ss_conf 37999998644888889999999999998728998624789999851124127999999982788889989----99999
Q gi|254780186|r 114 AGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIE----DVLKF 189 (311)
Q Consensus 114 AGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~----~~Ld~ 189 (311)
--.+...-++.+ + ....+.+.+. + |.. ..+..++++.|.-...+. ..-+.
T Consensus 87 ~~~ll~~mi~~S--d-N~Aa~~l~~~---~-G~~-------------------~~~n~~~~~~g~~~t~~~~~~~~~~~~ 140 (258)
T d1djaa_ 87 LKALIEASMTYS--D-NTANNKIIKE---I-GGI-------------------KKVKQRLKELGDKVTNPVRYEIELNYY 140 (258)
T ss_dssp HHHHHHHHHHSC--C-HHHHHHHHHH---H-TCH-------------------HHHHHHHHHTTCCSCCCCCCTTGGGCC
T ss_pred HHHHHHHHHHCC--C-HHHHHHHHHH---H-CCH-------------------HHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 999999998618--3-8999999998---4-899-------------------999999998234431055677766678
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHH--HHCCCCCCCCCC---E-
Q ss_conf 9987300007999999999982597077788755189999775544541133125667898--707871565221---1-
Q gi|254780186|r 190 YFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAY--RVGFPGKSGVGG---G- 263 (311)
Q Consensus 190 Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~--~VGlPaKSGVgG---g- 263 (311)
......-..|.+|++++..-|.++ ..+++...+....+|...--...-..... .+.+-.|+|-.+ .
T Consensus 141 ~~~~~~n~tta~d~a~ll~~l~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~KtG~~~~~g~~ 212 (258)
T d1djaa_ 141 SPKSKKDTSTPAAFGKTLNKLIAN--------GKLSKENKKFLLDLMLNNKSGDTLIKDGVPKDYKVADKSGQAITYASR 212 (258)
T ss_dssp CTTCCTTEECHHHHHHHHHHHTTS--------SSCCHHHHHHHHHHHHHCSTTTTTHHHHSCTTCEEEEEEEECSSTTCE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHC--------CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCE
T ss_conf 898765422799999999999848--------767889999999998558416544423468786688516645677723
Q ss_pred -EEEEE--CCC---CEEEEEC--CCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf -03343--785---1799875--32077898489999999999994
Q gi|254780186|r 264 -ILAIV--PSK---ASIAVWS--PGLDNSGNSLLGAKALELLAIRT 301 (311)
Q Consensus 264 -ilavv--Pg~---~gIav~S--P~LD~~GNSv~G~~~le~ls~~l 301 (311)
-.++| |++ .-|+|+. |.-+...+ ..++..+++.+
T Consensus 213 ~d~giv~~~~~~~~~vi~v~~~~~~~~~~~~----~~li~~i~~~v 254 (258)
T d1djaa_ 213 NDVAFVYPKGQSEPIVLVIFTNKDNKSDKPN----DKLISETAKSV 254 (258)
T ss_dssp EEEEEEECTTCCSCEEEEEEEECSSTTCCCC----THHHHHHHHHH
T ss_pred EEEEEEEECCCCCEEEEEEEECCCCCCHHHH----HHHHHHHHHHH
T ss_conf 5799999789984799999958998674789----99999999999
No 8
>d1m40a_ e.3.1.1 (A:) beta-Lactamase, class A {Escherichia coli, TEM-1 [TaxId: 562]}
Probab=95.76 E-value=0.07 Score=30.08 Aligned_cols=212 Identities=15% Similarity=0.152 Sum_probs=105.0
Q ss_pred CEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--H-HHHHHHCCCCCCCCCHH-HHHHHCCCCCCCCCCH
Q ss_conf 028998089-97887668786401999999999999996112--8-99999465765677204-4420114898476311
Q gi|254780186|r 38 FGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFD--E-EIWKRVGREPSGSSFDS-IVQLENENGIPRNPFV 112 (311)
Q Consensus 38 fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G--~-~V~~~VG~ePSg~~FNS-i~~Le~~~g~P~NPmi 112 (311)
.|+.+.+.+ |+++..-+.+.+|+..|+.|++++..+|++.. + ..-++|-..+......| +... . | +.-+
T Consensus 19 vgv~v~dl~tG~~l~s~n~d~~~p~AS~~Kl~~~~~~l~~v~~g~~~~~~~v~i~~~~~~~~s~~~~~--~---~-~~~~ 92 (263)
T d1m40a_ 19 VGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEK--H---L-TDGM 92 (263)
T ss_dssp EEEEEEETTTCCEEEEESTTSCEECGGGHHHHHHHHHHHHHHTTSCCTTCEECCCGGGCCSCCTTGGG--C---T-TTCE
T ss_pred EEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHCCCCCCCCC--C---C-CCCE
T ss_conf 99999999999696678899842466899999999999865348867785388646761268985114--6---8-8717
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHH----------HHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 137999998644888889999999----------9999987289986247899998511241279999999827888899
Q gi|254780186|r 113 NAGAIVVSDAVLGSSSADDAIENF----------LNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYK 182 (311)
Q Consensus 113 NAGAI~~~sli~~~~~~~~~~~~i----------~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~d 182 (311)
.-.-++...++.+ + ....+.+ .++++++ |.....++.... +. . ....
T Consensus 93 ~~~~ll~~mi~~S--d-N~A~~~L~~~~Gg~~~~~~~~~~~-g~~~~~~~~~~~-------~~--------~--~~~~-- 149 (263)
T d1m40a_ 93 TVRELCSAAITMS--D-NTAANLLLTTIGGPKELTAFLHNM-GDHVTRLDRWEP-------EL--------N--EAIP-- 149 (263)
T ss_dssp EHHHHHHHHHHSC--C-HHHHHHHHHHHTSHHHHHHHHHHT-TCSSCCCCCCTT-------GG--------G--CCCT--
T ss_pred EHHHHHHHHHCCC--C-HHHHHHHHHHHCCHHHHHHHHHHH-CHHHHHHCCCCC-------CC--------C--CCCC--
T ss_conf 8999987876058--2-899999999856166899999983-546665058877-------55--------6--6778--
Q ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC------C
Q ss_conf 8999999998730000799999999998259707778875518999977554454113312566789870787------1
Q gi|254780186|r 183 IEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFP------G 256 (311)
Q Consensus 183 v~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlP------a 256 (311)
....-..|.+|++++..-|..+ +.+++........+|......+. ..+-++| .
T Consensus 150 ---------~~~~~~tTa~d~a~l~~~l~~~--------~~l~~~~~~~~~~~~~~~~~~~~----~l~~~~p~~~~v~~ 208 (263)
T d1m40a_ 150 ---------NDERDTTTPAAMATTLRKLLTG--------ELLTLASRQQLIDWMEADKVAGP----LLRSALPAGWFIAD 208 (263)
T ss_dssp ---------TCCTTEECHHHHHHHHHHHHHS--------TTSCHHHHHHHHHHHHCCSSCTT----TGGGGCCTTCEEEE
T ss_pred ---------CCCCCEECHHHHHHHHHHHHHC--------CCCCHHHHHHHHHHHHCCCCCCC----CCCCCCCCCEEEEE
T ss_conf ---------7555365599999999999868--------74478899999998736820771----24345788837886
Q ss_pred CCCCCC----EEEEEE--CC--CCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 565221----103343--78--5179987532077898489999999999994
Q gi|254780186|r 257 KSGVGG----GILAIV--PS--KASIAVWSPGLDNSGNSLLGAKALELLAIRT 301 (311)
Q Consensus 257 KSGVgG----gilavv--Pg--~~gIav~SP~LD~~GNSv~G~~~le~ls~~l 301 (311)
|+|-++ +..+++ || ...+++|... ...+.-...+++..+++.+
T Consensus 209 KTG~~~~~~~~~~~~~~~~~~~~~i~vv~~~~--~~~~~~~~~~~i~~i~~~i 259 (263)
T d1m40a_ 209 KSGAGERGSRGIIAALGPDGKPSRIVVIYTTG--SQATMDERNRQIAEIGASL 259 (263)
T ss_dssp EEEECSTTCEEEEEEEESTTCCCEEEEEEEES--CCCCHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCEEEEEEEECCCCEEEEEEEEECC--CCCCHHHHHHHHHHHHHHH
T ss_conf 50557888747999998099829999998079--9889899999999999999
No 9
>d1vqqa3 e.3.1.1 (A:328-668) Penicillin binding protein 2a (PBP2A), C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=95.40 E-value=0.027 Score=32.81 Aligned_cols=92 Identities=20% Similarity=0.163 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHCCCC-----------CCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
Q ss_conf 999999873000079999999999825970-----------777887551899997755445411331256678987078
Q gi|254780186|r 186 VLKFYFHQCSLMMNCVQLAKSGLYLAFRGY-----------NSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGF 254 (311)
Q Consensus 186 ~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~-----------~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGl 254 (311)
....=+-|=.+.+|.-+||.+.+++||+|+ ++...++++++++++.++..|... +-+.+|..++.-|.
T Consensus 187 ~~~~s~G~G~~~vTplqma~aya~iAn~G~~~~P~~i~~i~~~~~~~~~~s~~~~~~v~~~m~~v-v~~gt~~~~~~~~~ 265 (341)
T d1vqqa3 187 LADSGYGQGEILINPVQILSIYSALENNGNINAPHLLKDTKNKVWKKNIISKENINLLTDGMQQV-VNKTHKEDIYRSYA 265 (341)
T ss_dssp HHHHHTTCSSCBBCHHHHHHHHHGGGTTTCEECCBCBTTSCCCEEECCCSCHHHHHHHHHHHHHH-HHTTTTTTTCCTTS
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCC-CCCCCCCCCCCCCC
T ss_conf 22112222210105347777875551176522212200013432312222034432322013121-23456654447776
Q ss_pred C--CCCCCC-------------CEEEEEECC--CCEEEEEC
Q ss_conf 7--156522-------------110334378--51799875
Q gi|254780186|r 255 P--GKSGVG-------------GGILAIVPS--KASIAVWS 278 (311)
Q Consensus 255 P--aKSGVg-------------GgilavvPg--~~gIav~S 278 (311)
| +|+|-+ +-.++.-|. +..++||=
T Consensus 266 ~vaGKTGTaq~~~~~~~~~~~~~wfvGf~~~~P~~~~~V~v 306 (341)
T d1vqqa3 266 NLIGKSGTAELKMKQGETGRQIGWFISYDKDNPNMMMAINV 306 (341)
T ss_dssp CEEEEEEEEECC------CCEEEEEEEEETTSCSCEEEEEE
T ss_pred CCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEE
T ss_conf 51058706886145788799559999971799949999999
No 10
>d1pyya4 e.3.1.1 (A:264-631) Penicillin-binding protein 2x (pbp-2x), transpeptidase domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=94.01 E-value=0.013 Score=34.79 Aligned_cols=67 Identities=18% Similarity=0.142 Sum_probs=44.4
Q ss_pred HHHCCHHHHHHHHHHHHCCCCC--CCC-------------------CCEECCHHHHHHHHHHHHHCCCC--------HHH
Q ss_conf 0000799999999998259707--778-------------------87551899997755445411331--------256
Q gi|254780186|r 195 SLMMNCVQLAKSGLYLAFRGYN--SLT-------------------NQSVISPLQSRCVNAVMLTCGHY--------DHS 245 (311)
Q Consensus 195 si~~t~~dLA~~~a~LAn~G~~--P~t-------------------~~~vi~~~~~~~v~s~M~TcGmY--------d~S 245 (311)
.+.+|.-+||.+.++|||+|+- |.- -.+.++++.+..+...|..-.+. ..+
T Consensus 190 ~~~~tplq~a~aya~iANgG~~~~P~~i~~i~d~~g~~~~~~~~~~~~~~i~~~~~~~~~~~m~~~v~~~~~~~~~~~gt 269 (368)
T d1pyya4 190 GISVTQTQMIRAFTAIANDGVMLEPKFISAIYDPNDQTARKSQKEIVGNPVSKDAASLTRTNMVLVGTDPVYGTMYNHST 269 (368)
T ss_dssp SCBBCHHHHHHHHHHHHTTTCEECCBCEEEEEEGGGTEEEECCCCEEECCSCHHHHHHHHHHHHHHHHCTTTCTTEETTT
T ss_pred CCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 65510788886778985487620557988886687641013443234444327899999999987531145542676046
Q ss_pred HHHHHHH-C--CCCCCCCC
Q ss_conf 6789870-7--87156522
Q gi|254780186|r 246 GDFAYRV-G--FPGKSGVG 261 (311)
Q Consensus 246 G~fa~~V-G--lPaKSGVg 261 (311)
|.+...+ | +=+|+|-+
T Consensus 270 g~~~~~~~g~~vaGKTGTa 288 (368)
T d1pyya4 270 GKPTVTVPGQNVALKSGTA 288 (368)
T ss_dssp TEESSCCTTSCCEEEEEEE
T ss_pred CCCCCCCCCCEEEEEEEEC
T ss_conf 5312137995066788222
No 11
>d1nrfa_ e.3.1.1 (A:) Penicillin receptor BlaR, C-terminal domain {Bacillus licheniformis [TaxId: 1402]}
Probab=92.82 E-value=0.32 Score=25.79 Aligned_cols=94 Identities=12% Similarity=0.020 Sum_probs=58.7
Q ss_pred HHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC--------EE
Q ss_conf 7300007999999999982597077788755189999775544541133125667898707871565221--------10
Q gi|254780186|r 193 QCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFPGKSGVGG--------GI 264 (311)
Q Consensus 193 ~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlPaKSGVgG--------gi 264 (311)
+-++.+|..++|.+-+++||+|. .++++.++.+...|...--. -+ -+-+|+|-+. =.
T Consensus 139 ~g~~~~TPlq~a~~~~~ian~G~-------~~~~~~~~~i~~~m~~~~~~------~~--~vagKTGTa~~~~~~~~~WF 203 (246)
T d1nrfa_ 139 DGSLQISPLEQVNILKKFYDNEF-------DFKQSNIETVKDSIRLEESN------GR--VLSGKTGTSVINGELHAGWF 203 (246)
T ss_dssp SSSSCBCHHHHHHHHHHHHHTTT-------CCCHHHHHHHHHHHEEEEET------TE--EEEEEEEEEECSSSCEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHCCCC-------CCCHHHHHHHHHHHHHHHHC------EE--CCCCCCCEEECCCCCCCEEE
T ss_conf 88235679999999999975998-------67858999999887654311------02--13542323325899774899
Q ss_pred EEEECCC---CEEEEECCCCCCCC--CCHHHHHHHHHHHHHHCCC
Q ss_conf 3343785---17998753207789--8489999999999994865
Q gi|254780186|r 265 LAIVPSK---ASIAVWSPGLDNSG--NSLLGAKALELLAIRTGWS 304 (311)
Q Consensus 265 lavvPg~---~gIav~SP~LD~~G--NSv~G~~~le~ls~~l~l~ 304 (311)
++.+|.. ..|+|+ +|..+ .+.....+.+.+-+++++.
T Consensus 204 vG~~p~~~p~~~iav~---i~~~~~~~~~~a~~i~~~il~~lgi~ 245 (246)
T d1nrfa_ 204 IGYVETADNTFFFAVH---IQGEKRAAGSSAAEIALSILDKKGIY 245 (246)
T ss_dssp EEEEECSSCEEEEEEE---EEESCSCHHHHHHHHHHHHHHHTTSC
T ss_pred EEEEECCCCEEEEEEE---EECCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 9999879986999999---97799985189999999999985999
No 12
>d1k38a_ e.3.1.1 (A:) Class D beta-lactamase {Salmonella typhimurium, OXA-2 [TaxId: 90371]}
Probab=91.42 E-value=0.23 Score=26.73 Aligned_cols=99 Identities=12% Similarity=0.068 Sum_probs=59.1
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCE---EEE
Q ss_conf 99873000079999999999825970777887551899997755445411331256678987078715652211---033
Q gi|254780186|r 190 YFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFPGKSGVGGG---ILA 266 (311)
Q Consensus 190 Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlPaKSGVgGg---ila 266 (311)
+.-+=++.+|..+++.+..+|||+|. .+++++++.++.+|..---+.+ .+-+|+|-..- .++
T Consensus 134 ~~~~g~~~itP~q~a~~~~~ian~~~-------~~s~~~~~~~~~~m~~~~~~g~--------~vaGKTGTa~~~~WFvG 198 (241)
T d1k38a_ 134 YWIEGSLAISAQEQIAFLRKLYRNEL-------PFRVEHQRLVKDLMIVEAGRNW--------ILRAKTGWEGRMGWWVG 198 (241)
T ss_dssp TTTTSSCCBCHHHHHHHHHHHHTTCS-------SSCHHHHHHHHHHTEEEEETTE--------EEEEEEEESSSEEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCC-------CCCHHHHHHHHHHHHHHHHCCC--------CEEECCCCCCCCEEEEE
T ss_conf 10388642258999999999981998-------7887799999999999773374--------11222478877676999
Q ss_pred EECCCCEEEEECCCCC---CCCCCHHHHHHHHHHHHHHCC
Q ss_conf 4378517998753207---789848999999999999486
Q gi|254780186|r 267 IVPSKASIAVWSPGLD---NSGNSLLGAKALELLAIRTGW 303 (311)
Q Consensus 267 vvPg~~gIav~SP~LD---~~GNSv~G~~~le~ls~~l~l 303 (311)
-+|..-..-+|.=.+| ....+.++....+.+-+.++-
T Consensus 199 ~~p~~~~~~~~~v~v~~~~~~~~~~~a~~i~~~il~~l~~ 238 (241)
T d1k38a_ 199 WVEWPTGSVFFALNIDTPNRMDDLFKREAIVRAILRSIEA 238 (241)
T ss_dssp EEEETTEEEEEEEEEECTTGGGGTHHHHHHHHHHHHHTTS
T ss_pred EEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 9987998299999996799877348899999999998479
No 13
>d1o7ea_ e.3.1.1 (A:) beta-Lactamase, class A {Stenotrophomonas maltophilia, L2 [TaxId: 40324]}
Probab=89.60 E-value=0.063 Score=30.36 Aligned_cols=223 Identities=15% Similarity=0.171 Sum_probs=111.6
Q ss_pred CHHHHCCCHHHCEEEEEE-CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--HH-HHHHHCCCCCCCCCHH-HHHHH
Q ss_conf 833205982470289980-8997887668786401999999999999996112--89-9999465765677204-44201
Q gi|254780186|r 27 IPELAKVRIDHFGMSLAL-EDGTVYSVGESEFLFSIQSISKVFLLTIALRKFD--EE-IWKRVGREPSGSSFDS-IVQLE 101 (311)
Q Consensus 27 IP~La~vdp~~fgiai~t-~dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G--~~-V~~~VG~ePSg~~FNS-i~~Le 101 (311)
|.+|++.-+-.+||++.+ ..|+.+.. +.|.+|++.|+.|+++.+.+++... +- .-++|-..|......+ +..
T Consensus 11 l~~~~~~~~g~~gv~v~D~~tG~~~~~-~~d~~~p~AS~~Kl~~~~~~l~~~~~g~~~ld~~v~v~~~~~~~~~~~~~-- 87 (267)
T d1o7ea_ 11 FAALEKACAGRLGVTLLDTASGRRIGH-RQDERFPMCSTFKSMLAATVLSQAERMPALLDRRVPVGEADLLSHAPVTR-- 87 (267)
T ss_dssp HHHHHHHHTSEEEEEEEETTTCCEEEE-STTSCEECGGGGHHHHHHHHHHHHTTCTTTTTCEEEECGGGCCSSCTTGG--
T ss_pred HHHHHHHCCCEEEEEEEECCCCCEEEE-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEE--
T ss_conf 999998549659999998999988777-79984032799999999999998544888777179960012558998622--
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCHHH-------HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 148984763111379999986448888899-------9999999999872899862478999985112412799999998
Q gi|254780186|r 102 NENGIPRNPFVNAGAIVVSDAVLGSSSADD-------AIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVR 174 (311)
Q Consensus 102 ~~~g~P~NPmiNAGAI~~~sli~~~~~~~~-------~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk 174 (311)
...|.+ + ----+....++.+...+.. -.+.+-+|++++ |-....++.. | .+.|
T Consensus 88 ~~~g~~---~-tv~dLl~~mi~~SdN~Aa~~L~~~~gG~~~~n~~~~~l-G~~~t~~~~~----~---~~~~-------- 147 (267)
T d1o7ea_ 88 RHAGKD---M-TVRDLCRATIITSDNTAANLLFGVVGGPPAVTAFLRAS-GDTVSRSDRL----E---PELN-------- 147 (267)
T ss_dssp GGTTEE---E-EHHHHHHHHHHSCCHHHHHHHHHHHTHHHHHHHHHHHH-TCSSCCCCCC----T---TGGG--------
T ss_pred ECCCCC---C-CHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHC-CCCCCCCCCC----C---CCCC--------
T ss_conf 058973---0-38999999997284799999999806989999999982-9824103355----6---6444--------
Q ss_pred HCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
Q ss_conf 27888899899999999873000079999999999825970777887551899997755445411331256678987078
Q gi|254780186|r 175 SYGNIRYKIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGF 254 (311)
Q Consensus 175 ~~g~~~~dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGl 254 (311)
.. ...+. .-..|.+|++++..-|.++ +.+++......+.+|..+--.+ +..+-++
T Consensus 148 ~~--~~~~~-----------~~~tTa~d~a~ll~~l~~~--------~~l~~~~~~~l~~~m~~~~~~~----~~i~~~~ 202 (267)
T d1o7ea_ 148 SF--AKGDP-----------RDTTTPAAMAATLQRVVLG--------EVLQPASRQQLADWLIDNETGD----ACLRAGL 202 (267)
T ss_dssp CC--BTTBC-----------TTEECHHHHHHHHHHHHTS--------SSSCHHHHHHHHHHHHTCSSCT----TTHHHHS
T ss_pred CC--CCCCC-----------CCCCCHHHHHHHHHHHHHC--------CCCCHHHHHHHHHHHHCCCCCC----CCCCCCC
T ss_conf 57--89986-----------5542899999999999757--------6357888999999985385475----3321346
Q ss_pred CC------CCCCC--CE--EEEEE---CC--CCEEEEECCCCCCCCCC-HHHHHHHHHHHHH
Q ss_conf 71------56522--11--03343---78--51799875320778984-8999999999999
Q gi|254780186|r 255 PG------KSGVG--GG--ILAIV---PS--KASIAVWSPGLDNSGNS-LLGAKALELLAIR 300 (311)
Q Consensus 255 Pa------KSGVg--Gg--ilavv---Pg--~~gIav~SP~LD~~GNS-v~G~~~le~ls~~ 300 (311)
|. |+|-+ |+ .+++| |+ ..-|+|+.- ....+ -....++..+++-
T Consensus 203 p~~~~v~~KTG~~~~~~~ndvgiv~~~~~g~~~iv~V~~~---~~~~~~~~~~~~ia~i~r~ 261 (267)
T d1o7ea_ 203 GKRWRVGDKTGSNGEDARNDIAVLWPVAGGAPWVLTAYLQ---AGAISYEQRASVLAQVGRI 261 (267)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEEEEETTSSCCEEEEEEEE---CTTSCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEEEC---CCCCCHHHHHHHHHHHHHH
T ss_conf 8785577622778888566699998669998799999957---9999989999999999999
No 14
>d1i2sa_ e.3.1.1 (A:) beta-Lactamase, class A {Bacillus licheniformis [TaxId: 1402]}
Probab=88.03 E-value=0.095 Score=29.20 Aligned_cols=213 Identities=15% Similarity=0.121 Sum_probs=104.4
Q ss_pred HCEEEEEEC-CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCH-HHHHHHCCCCCCC-CCHHHHHHHCCCCCCCCCCHH
Q ss_conf 702899808-9978876687864019999999999999961128-9999946576567-720444201148984763111
Q gi|254780186|r 37 HFGMSLALE-DGTVYSVGESEFLFSIQSISKVFLLTIALRKFDE-EIWKRVGREPSGS-SFDSIVQLENENGIPRNPFVN 113 (311)
Q Consensus 37 ~fgiai~t~-dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~-~V~~~VG~ePSg~-~FNSi~~Le~~~g~P~NPmiN 113 (311)
.+|+++.+. .|++++. +.+.+|+.-|++|++++..+|++.++ ++-++|-..+... +..++..+ ..|... -
T Consensus 13 ~~gv~v~D~~tG~~~~~-n~d~~~~~AS~~Kl~~~~~~l~~~~~g~Ld~~v~i~~~~~~~~~~~~~~--~~g~~~----t 85 (255)
T d1i2sa_ 13 KLGIFALDTGTNRTVTY-RPDERFAFASTIKALTVGVLLQQKSIEDLNQRITYTRDDLVNYNPITEK--HVDTGM----T 85 (255)
T ss_dssp EEEEEEEETTTTEEEEE-STTCCEECGGGHHHHHHHHHHHHSCTGGGGCEECCCGGGCCSCCTTGGG--STTTCE----E
T ss_pred EEEEEEEECCCCCEEEE-CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHCCCCCCCCC--CCCCCE----E
T ss_conf 59999998999988888-8997185597999999999999746689764367658984378974235--778740----3
Q ss_pred HHHHHHHHHHCCCCCHHHHHHH----------HHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCH
Q ss_conf 3799999864488888999999----------999999872899862478999985112412799999998278888998
Q gi|254780186|r 114 AGAIVVSDAVLGSSSADDAIEN----------FLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKI 183 (311)
Q Consensus 114 AGAI~~~sli~~~~~~~~~~~~----------i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv 183 (311)
---+....++.+ + ....+. +-++++++ |-....+... ....|
T Consensus 86 v~~ll~~mi~~S--d-N~Aa~~L~~~~gg~~~~n~~~~~l-G~~~t~~~~~-------~~~~~----------------- 137 (255)
T d1i2sa_ 86 LKELADASLRYS--D-NTAQNLILKQIGGPESLKKELRKI-GDEVTNPERF-------EPELN----------------- 137 (255)
T ss_dssp HHHHHHHHHHHC--C-HHHHHHHHHHTTCHHHHHHHHHHT-TCCSCCCCCC-------TTGGG-----------------
T ss_pred HHHHHHHHHHHC--C-HHHHHHHHHHHCCCHHHHHHHHHC-CCCCEECCCC-------CCCCC-----------------
T ss_conf 999999998706--3-899999999813825789999982-9844665665-------66556-----------------
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC--CCCCCCC
Q ss_conf 99999999873000079999999999825970777887551899997755445411331256678987078--7156522
Q gi|254780186|r 184 EDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGF--PGKSGVG 261 (311)
Q Consensus 184 ~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGl--PaKSGVg 261 (311)
+.......-..|.+|++++..-|..+ + .+++........+|.....+..--......|. -.|+|-+
T Consensus 138 ----~~~~~~~~~~~ta~d~a~ll~~l~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~KTG~~ 205 (255)
T d1i2sa_ 138 ----EVNPGETQDTSTARALATSLQAFALE-------D-KLPSEKRELLIDWMKRNTTGDALIRAGVPEGWEVADKTGAG 205 (255)
T ss_dssp ----CCCTTCCTTEECHHHHHHHHHHHHTS-------T-TSCHHHHHHHHHHHHTCSSCTTTHHHHSCTTCEEEEEEEEE
T ss_pred ----CCCCCCCCCHHHHHHHHHHHHHHHHC-------C-CCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCEEEEEEEEC
T ss_conf ----78998653024499999999999838-------8-54147889999997404157631001378674587566345
Q ss_pred --CE--EEEEE--CC--CCEEEEEC--CCCCCCCCCHHHHHHHHHHHHH
Q ss_conf --11--03343--78--51799875--3207789848999999999999
Q gi|254780186|r 262 --GG--ILAIV--PS--KASIAVWS--PGLDNSGNSLLGAKALELLAIR 300 (311)
Q Consensus 262 --Gg--ilavv--Pg--~~gIav~S--P~LD~~GNSv~G~~~le~ls~~ 300 (311)
|+ .+++| |+ .+-|+|++ |.-|..... +++..+++.
T Consensus 206 ~~~~~~dvg~v~~~~g~~yiivV~~~~~~~~~~~~~----~~i~~i~r~ 250 (255)
T d1i2sa_ 206 SYGTRNDIAIIWPPKGDPVVLAVLSSRDKKDAKYDD----KLIAEATKV 250 (255)
T ss_dssp TTTEEEEEEEEECSSSCCEEEEEEEECSSTTCCCCT----HHHHHHHHH
T ss_pred CCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHH----HHHHHHHHH
T ss_conf 888478899998699988999999179988867899----999999999
No 15
>d1buea_ e.3.1.1 (A:) beta-Lactamase, class A {Enterobacter cloacae, NMC-A carbapenemase [TaxId: 550]}
Probab=87.33 E-value=0.22 Score=26.78 Aligned_cols=217 Identities=18% Similarity=0.206 Sum_probs=101.4
Q ss_pred HCEEEEEEC-CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCH---HHHHHHCCCCCCCCCH-HHHHHHCCCCCCCCCC
Q ss_conf 702899808-9978876687864019999999999999961128---9999946576567720-4442011489847631
Q gi|254780186|r 37 HFGMSLALE-DGTVYSVGESEFLFSIQSISKVFLLTIALRKFDE---EIWKRVGREPSGSSFD-SIVQLENENGIPRNPF 111 (311)
Q Consensus 37 ~fgiai~t~-dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~---~V~~~VG~ePSg~~FN-Si~~Le~~~g~P~NPm 111 (311)
..|+++.+. +|+++.. +.+.+|+.-|++|++++..+|++..+ ...++|-..+...... ++..+......+..-+
T Consensus 18 ~~gv~v~Dl~tg~~~~~-n~~~~~p~AS~~Kl~~a~~~l~~i~~g~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~t~~dl 96 (265)
T d1buea_ 18 RIGVYALDTGSGKSFSY-RANERFPLCSSFKGFLAAAVLKGSQDNRLNLNQIVNYNTRSLEFHSPITTKYKDNGMSLGDM 96 (265)
T ss_dssp EEEEEEEETTTCCEEEE-STTSCEECGGGGHHHHHHHHHHHHHTTSSCTTCEECCTTSCCCSSCHHHHHTTTTCEEHHHH
T ss_pred EEEEEEEECCCCCEEEE-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHCCCCCCCEECCCCCCEEHHHH
T ss_conf 69999998999988888-89984621899999999999998663887756516721655137997401158972569999
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHH----HHH
Q ss_conf 1137999998644888889999999999998728998624789999851124127999999982788889989----999
Q gi|254780186|r 112 VNAGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIE----DVL 187 (311)
Q Consensus 112 iNAGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~----~~L 187 (311)
....++.. + ....+.+.+ .+.|.. -.+-.++++.|.-..+.. ..-
T Consensus 97 ------l~~ml~~S--d-N~Aa~~l~~---~~~~~~-------------------~~~~~~~~~lg~~~~~~~~~~~~~~ 145 (265)
T d1buea_ 97 ------AAAALQYS--D-NGATNIILE---RYIGGP-------------------EGMTKFMRSIGDEDFRLDRWELDLN 145 (265)
T ss_dssp ------HHHHHHSC--C-HHHHHHHHH---HTTCHH-------------------HHHHHHHHHTTCSSCBCCSCTTGGG
T ss_pred ------HHHHHHHC--C-CHHHHHHHH---HHCCCH-------------------HHHHHHHHHCCCHHHHHHCCCCCCC
T ss_conf ------99998727--6-099999999---864789-------------------9999999982853223202456555
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC------CCCCC
Q ss_conf 999987300007999999999982597077788755189999775544541133125667898707871------56522
Q gi|254780186|r 188 KFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFPG------KSGVG 261 (311)
Q Consensus 188 d~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlPa------KSGVg 261 (311)
+.......-..|++|++++..-|..+ ..+++........+|..+--+.. ..+-++|. |+|-.
T Consensus 146 ~~~~~~~~n~tTa~d~a~ll~~l~~~--------~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~v~~KTG~~ 213 (265)
T d1buea_ 146 TAIPGDERDTSTPAAVAKSLKTLALG--------NILSEHEKETYQTWLKGNTTGAA----RIRASVPSDWVVGDKTGSC 213 (265)
T ss_dssp CCCTTCCTTEECHHHHHHHHHHHHHS--------SSSCHHHHHHHHHHHHTCSSCTT----TGGGGSCTTSEEEEEEEEC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHC--------CCCCHHHHHHHHHHHHCCCCCCC----CCCCCCCCCCEEEEEECCC
T ss_conf 78899854401499999999999837--------87788899999999857933566----5544467884478874666
Q ss_pred ---CEE--EEEE--CC--CCEEEEEC--CCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf ---110--3343--78--51799875--32077898489999999999994
Q gi|254780186|r 262 ---GGI--LAIV--PS--KASIAVWS--PGLDNSGNSLLGAKALELLAIRT 301 (311)
Q Consensus 262 ---Ggi--lavv--Pg--~~gIav~S--P~LD~~GNSv~G~~~le~ls~~l 301 (311)
|.. +++| |+ .+-|+|+. +..|..-+ .+++..+++..
T Consensus 214 ~~~G~~~d~giv~~~~g~~yiiav~~~~~~~~~~~~----~~~i~~i~~~i 260 (265)
T d1buea_ 214 GAYGTANDYAVVWPKNRAPLIISVYTTKNEKEAKHE----DKVIAEASRIA 260 (265)
T ss_dssp SSTTCEEEEEEEECTTSCCEEEEEEEECSCTTCCCC----HHHHHHHHHHH
T ss_pred CCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHH----HHHHHHHHHHH
T ss_conf 678857889999849998899999946998997899----99999999999
No 16
>d1n9ba_ e.3.1.1 (A:) beta-Lactamase, class A {Klebsiella pneumoniae, SHV-2 [TaxId: 573]}
Probab=85.33 E-value=0.37 Score=25.33 Aligned_cols=214 Identities=15% Similarity=0.162 Sum_probs=104.3
Q ss_pred EEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--HH-HHHHHCCCCCCCCCH-HHHHHHCCCCCCCCCCHH
Q ss_conf 28998089-97887668786401999999999999996112--89-999946576567720-444201148984763111
Q gi|254780186|r 39 GMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFD--EE-IWKRVGREPSGSSFD-SIVQLENENGIPRNPFVN 113 (311)
Q Consensus 39 giai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G--~~-V~~~VG~ePSg~~FN-Si~~Le~~~g~P~NPmiN 113 (311)
|+.+.+.+ |+++..-+.+.+|+..|+.|+++...+++... +. .-++|-..+...... ++..+ ..|.+ +.
T Consensus 20 g~~v~D~~tG~~l~~~n~d~~~~~AS~~Kl~~a~~~l~~v~~g~~~~~~~v~~~~~~~~~~~~~~~~--~~g~~----~t 93 (265)
T d1n9ba_ 20 GMIEMDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEK--HLADG----MT 93 (265)
T ss_dssp EEEEEETTTCCEEEEESTTSCEECGGGHHHHHHHHHHHHHHTTSCCTTCEECCCGGGCCSCCTTGGG--GTTTC----EE
T ss_pred EEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCCEEC--CCCCC----CC
T ss_conf 9999999999385458889846348799999999999987548987761899626653489984001--57886----37
Q ss_pred HHHHHHHHHHCCCCCHHHHH-------HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 37999998644888889999-------99999999872899862478999985112412799999998278888998999
Q gi|254780186|r 114 AGAIVVSDAVLGSSSADDAI-------ENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDV 186 (311)
Q Consensus 114 AGAI~~~sli~~~~~~~~~~-------~~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~ 186 (311)
-.-+....++.....+.+.+ +.+-.+++++ |.....+.......... ...
T Consensus 94 l~~ll~~mi~~SdN~Aa~~L~~~~g~~~~~~~~~~~l-g~~~~~~~~~~~~~~~~-----------------~~~----- 150 (265)
T d1n9ba_ 94 VGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQI-GDNVTRLDRWETELNEA-----------------LPG----- 150 (265)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHTTHHHHHHHHHHHT-TCCSCBCCCCTTGGGCC-----------------CTT-----
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH-CCHHHHCCCCCCCCCCC-----------------CCC-----
T ss_conf 9999986353793799999999967946889999983-70332122456643357-----------------899-----
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC------CCCC
Q ss_conf 9999987300007999999999982597077788755189999775544541133125667898707871------5652
Q gi|254780186|r 187 LKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFPG------KSGV 260 (311)
Q Consensus 187 Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlPa------KSGV 260 (311)
.---..|++|++++..-|.++ +.+++...+....+|..+--+ ....+-++|. |+|-
T Consensus 151 ------~~~n~~ta~d~a~ll~~l~~~--------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~KTG~ 212 (265)
T d1n9ba_ 151 ------DARDTTTPASMAATLRKLLTS--------QRLSARSQRQLLQWMVDDRVA----GPLIRSVLPAGWFIADKTGA 212 (265)
T ss_dssp ------CCTTEECHHHHHHHHHHHHHS--------SSSCHHHHHHHHHHHHTCSSS----HHHHHTTSCTTCEEEEEEEE
T ss_pred ------CCCCCHHHHHHHHHHHHHHHC--------CCCCHHHHHHHHHHHHCCEEC----CCCCCCCCCCCCEEEEEECC
T ss_conf ------742414299999999999857--------864589999999998378635----32222237888657773366
Q ss_pred C--CE--EEEEE--CCC--CEEEEECCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 2--11--03343--785--179987532077898489999999999994
Q gi|254780186|r 261 G--GG--ILAIV--PSK--ASIAVWSPGLDNSGNSLLGAKALELLAIRT 301 (311)
Q Consensus 261 g--Gg--ilavv--Pg~--~gIav~SP~LD~~GNSv~G~~~le~ls~~l 301 (311)
. |+ ..+++ |++ .-++++... ...+--...+++..+++.+
T Consensus 213 ~~~~~~~d~~~v~~~~~~~~ivvv~~~~--~~~~~~~~~~~i~~i~~~l 259 (265)
T d1n9ba_ 213 SERGARGIVALLGPNNKAERIVVIYLRD--TPASMAERNQQIAGIGAAL 259 (265)
T ss_dssp ETTTEEEEEEEEESTTCCCEEEEEEEES--CCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEEEECCCCEEEEEEEECC--CCCCHHHHHHHHHHHHHHH
T ss_conf 7777760799999489848999999379--9889899999999999999
No 17
>d1k55a_ e.3.1.1 (A:) Class D beta-lactamase {Pseudomonas aeruginosa, OXA-10 [TaxId: 287]}
Probab=84.66 E-value=0.22 Score=26.87 Aligned_cols=100 Identities=14% Similarity=0.035 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCE---
Q ss_conf 99999873000079999999999825970777887551899997755445411331256678987078715652211---
Q gi|254780186|r 187 LKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFPGKSGVGGG--- 263 (311)
Q Consensus 187 Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlPaKSGVgGg--- 263 (311)
++.+.-+.++.+|..++|.+.+++||+|. .+++++++.+..+|...-... ..+=+|+|-+..
T Consensus 130 ~~~~~~~g~~~itplq~a~~~~~ian~g~-------~~~~~~~~~~~~~m~~~~~~g--------~~vaGKTGTa~~~~~ 194 (245)
T d1k55a_ 130 IDKFWLEGQLRISAVNQVEFLESLYLNKL-------SASKENQLIVKEALVTEAAPE--------YLVHSKTGFSGVGTE 194 (245)
T ss_dssp TTTTTTTSSCCBCHHHHHHHHHHHHTTCS-------SSCHHHHHHHHHHTEEEEETT--------EEEEEEEEECCCCCS
T ss_pred CCCHHHCCCCCCCHHHHHHHHHHHHCCCC-------CCCHHHHHHHHHHHHHHHHHH--------HHHHHHCCCCCCCCC
T ss_conf 55411168743459999999999974993-------668758899999999975230--------555533044504578
Q ss_pred -------EEEEECCC---CEEEEECCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf -------03343785---1799875320778984899999999999948
Q gi|254780186|r 264 -------ILAIVPSK---ASIAVWSPGLDNSGNSLLGAKALELLAIRTG 302 (311)
Q Consensus 264 -------ilavvPg~---~gIav~SP~LD~~GNSv~G~~~le~ls~~l~ 302 (311)
.+.-+|.. ..++|+=..=+..+.+++ ....+.+-+.++
T Consensus 195 ~~~~~aWFvGf~~~~~~~~~~av~i~~~~~~~~~~a-~~ia~~il~~~~ 242 (245)
T d1k55a_ 195 SNPGVAWWVGWVEKETEVYFFAFNMDIDNESKLPLR-KSIPTKIMESEG 242 (245)
T ss_dssp SSCEEEEEEEEEEETTEEEEEEEEEEESCGGGTTHH-HHHHHHHHHHTT
T ss_pred CCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHH-HHHHHHHHHHCC
T ss_conf 997658999988879986999999767997774889-999999999748
No 18
>d1iysa_ e.3.1.1 (A:) beta-Lactamase, class A {Escherichia coli, TOHO-1 [TaxId: 562]}
Probab=84.07 E-value=0.15 Score=27.98 Aligned_cols=215 Identities=14% Similarity=0.141 Sum_probs=103.0
Q ss_pred HCEEEEEEC-CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCH-H--HHHHHCCCCCCCCC-HHHHHHHCCCCCCCCCC
Q ss_conf 702899808-9978876687864019999999999999961128-9--99994657656772-04442011489847631
Q gi|254780186|r 37 HFGMSLALE-DGTVYSVGESEFLFSIQSISKVFLLTIALRKFDE-E--IWKRVGREPSGSSF-DSIVQLENENGIPRNPF 111 (311)
Q Consensus 37 ~fgiai~t~-dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~-~--V~~~VG~ePSg~~F-NSi~~Le~~~g~P~NPm 111 (311)
.+||++.+. +|+++.. +.+.+|+..|+.|++++..++++..+ + .-++|-..+....- .++..+ ..|..
T Consensus 17 ~~gv~v~D~~tg~~~~~-n~d~~~~~AS~~Kl~~~~~~l~~v~~g~l~~~~~v~~~~~~~~~~~~~~~~--~~g~~---- 89 (261)
T d1iysa_ 17 RLGVALINTADNSQILY-RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAEK--HVNGT---- 89 (261)
T ss_dssp EEEEEEEETTTTEEEEE-STTSCEECGGGGHHHHHHHHHHHHTSCTTSTTCEEECCGGGCCSCCTTGGG--GTTSE----
T ss_pred EEEEEEEECCCCCEEEE-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEC--CCCCC----
T ss_conf 69999998999988888-899727628899999999999862448877674399850444489985213--67971----
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHH----------HHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 113799999864488888999999----------9999998728998624789999851124127999999982788889
Q gi|254780186|r 112 VNAGAIVVSDAVLGSSSADDAIEN----------FLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRY 181 (311)
Q Consensus 112 iNAGAI~~~sli~~~~~~~~~~~~----------i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~ 181 (311)
+.-.-+...-++.+ + ....+. +-.+++++ |.....+.... . .+...+ ..
T Consensus 90 ~t~~~ll~~ml~~S--d-N~A~~~L~~~~G~~~~~~~~~~~l-g~~~~~~~~~~-------~--------~~~~~~--~~ 148 (261)
T d1iysa_ 90 MTLAELGAAALQYS--D-NTAMNKLIAHLGGPDKVTAFARSL-GDETFRLDRTE-------P--------TLNTAI--PG 148 (261)
T ss_dssp EEHHHHHHHHHHSC--C-HHHHHHHHHHHTSHHHHHHHHHHT-TCSSCCCCCCT-------T--------GGGCCC--TT
T ss_pred CCHHHHHHHHHHHC--C-HHHHHHHHHHHCCCHHHHHHHHHH-CCHHHHCCCCC-------C--------CCCCCC--CC
T ss_conf 45999999999848--4-799999999958932669999993-61444224765-------5--------445788--99
Q ss_pred CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC--CCCC
Q ss_conf 98999999998730000799999999998259707778875518999977554454113312566789870787--1565
Q gi|254780186|r 182 KIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFP--GKSG 259 (311)
Q Consensus 182 dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlP--aKSG 259 (311)
+. .-..|.+|++.+..-|.++ ..+++........+|..+--+.........-|.+ .|+|
T Consensus 149 ~~-----------~~~tTa~d~~~ll~~l~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~KTG 209 (261)
T d1iysa_ 149 DP-----------RDTTTPLAMAQTLKNLTLG--------KALAETQRAQLVTWLKGNTTGSASIRAGLPKSWVVGDKTG 209 (261)
T ss_dssp CC-----------TTEECHHHHHHHHHHHHTS--------SSSCHHHHHHHHHHHHTCSSCTTTGGGGSCTTSEEEEEEE
T ss_pred CC-----------CCCCCHHHHHHHHHHHHHC--------CCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEEEC
T ss_conf 74-----------5531699999999999848--------9765689999999983884152112121456864887202
Q ss_pred CC--CE--EEEEE--CC--CCEEEEEC--CCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 22--11--03343--78--51799875--320778984899999999999948
Q gi|254780186|r 260 VG--GG--ILAIV--PS--KASIAVWS--PGLDNSGNSLLGAKALELLAIRTG 302 (311)
Q Consensus 260 Vg--Gg--ilavv--Pg--~~gIav~S--P~LD~~GNSv~G~~~le~ls~~l~ 302 (311)
-. |+ .++++ |+ .+-|+++. |.-+...+. .++..+++.+-
T Consensus 210 ~~~~~~~~dvg~v~~~~~~~~ivvv~~~~~~~~~~~~~----~lia~ia~~v~ 258 (261)
T d1iysa_ 210 SGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAERRR----DILAAAAKIVT 258 (261)
T ss_dssp ECSTTCEEEEEEEECSSSCCEEEEEEEECSSTTCCCCH----HHHHHHHHHHT
T ss_pred CCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCHHHHH----HHHHHHHHHHH
T ss_conf 67888878999999389968999999468987867899----99999999998
No 19
>d1m6ka_ e.3.1.1 (A:) Class D beta-lactamase {Escherichia coli, OXA-1 [TaxId: 562]}
Probab=83.14 E-value=1.5 Score=21.50 Aligned_cols=102 Identities=13% Similarity=-0.037 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC----
Q ss_conf 9999998730000799999999998259707778875518999977554454113312566789870787156522----
Q gi|254780186|r 186 VLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFPGKSGVG---- 261 (311)
Q Consensus 186 ~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlPaKSGVg---- 261 (311)
.+..++.+-.+.+|..+++.+-+.+||+|+ .++++.++.++..|..----+ . ..+=+|.|-+
T Consensus 133 ~~~~~~~~g~~~iTPlq~a~~~~~ian~g~-------~~~~~~~~~i~~~m~~~v~~~---g----~~vaGKTGTa~~~~ 198 (251)
T d1m6ka_ 133 GLTEAWLESSLKISPEEQIQFLRKIINHNL-------PVKNSAIENTIENMYLQDLDN---S----TKLYGKTGAGFTAN 198 (251)
T ss_dssp HHHHTTSSSSCCBCHHHHHHHHHHHHTTCS-------SSCHHHHHHHHHTTEEEECTT---S----CEEEEEEEEEECTT
T ss_pred CCCCCCCCCCEEECHHHHHHHHHHHHCCCC-------CCCHHHHHHHHHHHEEEEECC---C----CEEECCCCCCCCCC
T ss_conf 444520169656709999999999971997-------788289999998640589539---9----11102236664689
Q ss_pred CE-----EEEEECC---CCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 11-----0334378---5179987532077898489999999999994
Q gi|254780186|r 262 GG-----ILAIVPS---KASIAVWSPGLDNSGNSLLGAKALELLAIRT 301 (311)
Q Consensus 262 Gg-----ilavvPg---~~gIav~SP~LD~~GNSv~G~~~le~ls~~l 301 (311)
++ .+.-+|- +--+.+.-..-+..|+..+|..+-+.+.+-+
T Consensus 199 ~~~~~aWFvGf~p~~~~~~~v~v~~~~~~~~~~~~a~~~a~~i~~~il 246 (251)
T d1m6ka_ 199 RTLQNGWFEGFIISKSGHKYVFVSALTGNLGSNLTSSIKAKKNAITIL 246 (251)
T ss_dssp SSCEEEEEEEEEECTTCCEEEEEEEEEECCCSSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 997408999998848998899999970898877212799999999999
No 20
>d1bsga_ e.3.1.1 (A:) beta-Lactamase, class A {Streptomyces albus G [TaxId: 1962]}
Probab=82.66 E-value=0.53 Score=24.37 Aligned_cols=207 Identities=16% Similarity=0.208 Sum_probs=98.0
Q ss_pred CEEEEEEC-CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--H-HHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHH
Q ss_conf 02899808-997887668786401999999999999996112--8-9999946576567720444201148984763111
Q gi|254780186|r 38 FGMSLALE-DGTVYSVGESEFLFSIQSISKVFLLTIALRKFD--E-EIWKRVGREPSGSSFDSIVQLENENGIPRNPFVN 113 (311)
Q Consensus 38 fgiai~t~-dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G--~-~V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiN 113 (311)
+||++.+. +|+.+.. +.+.+|+.-|++|++++..+|++.- . ...++|-..+..... .....+.+..+.
T Consensus 18 ~gv~v~D~~tg~~~~~-n~d~~~~~AS~~Kl~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 89 (266)
T d1bsga_ 18 LGVYAYDTGSGRTVAY-RADELFPMCSVFKTLSSAAVLRDLDRNGEFLSRRILYTQDDVEQ-------ADGAPETGKPQN 89 (266)
T ss_dssp EEEEEEETTTCCEEEE-STTSCEECGGGGHHHHHHHHHHHTCSSSTTTTCEECCCHHHHHH-------HTCCTTTTSHHH
T ss_pred EEEEEEECCCCCEEEE-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHC-------CCCCCCCCCCCC
T ss_conf 9999999999988898-89980662899999999999998652897656156762999731-------476454334336
Q ss_pred HHH------HHHHHHHCCCCCHHHHHHH----------HHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCC
Q ss_conf 379------9999864488888999999----------999999872899862478999985112412799999998278
Q gi|254780186|r 114 AGA------IVVSDAVLGSSSADDAIEN----------FLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYG 177 (311)
Q Consensus 114 AGA------I~~~sli~~~~~~~~~~~~----------i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g 177 (311)
.|- +....++.. + ....+. +-.+++++ |-....++..... .| .
T Consensus 90 ~g~~~t~~~ll~~mi~~S--d-N~Aa~~L~~~lG~~~~~~~~~~~~-g~~~~~~~~~~~~-------~~----------~ 148 (266)
T d1bsga_ 90 LANGMTVEELCEVSITAS--D-NCAANLMLRELGGPAAVTRFVRSL-GDRVTRLDRWEPE-------LN----------S 148 (266)
T ss_dssp HHHCEEHHHHHHHHHHSC--C-HHHHHHHHHHHTSTHHHHHHHHHT-TCSSCCCCSCTTG-------GG----------C
T ss_pred CCCCCCHHHHHHHHHHHH--H-HHHHHHHHHHHCCCHHHHHHHHHH-CCHHHHCCCCCCC-------CC----------C
T ss_conf 788638999999999985--4-999999999958926799999994-7442323477776-------56----------7
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC--
Q ss_conf 888998999999998730000799999999998259707778875518999977554454113312566789870787--
Q gi|254780186|r 178 NIRYKIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFP-- 255 (311)
Q Consensus 178 ~~~~dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlP-- 255 (311)
.. .....-..|.+|++++..-|.. .+.+++........+|....-... ....+.|
T Consensus 149 ~~-----------~~~~~n~~ta~d~~~ll~~l~~--------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 205 (266)
T d1bsga_ 149 AE-----------PGRVTDTTSPRAITRTYGRLVL--------GDALNPRDRRLLTSWLLANTTSGD----RFRAGLPDD 205 (266)
T ss_dssp CC-----------TTCCTTEECHHHHHHHHHHHHT--------SSSSCHHHHHHHHHHHHTCCSCTT----THHHHSCTT
T ss_pred CC-----------CCCCCCHHHHHHHHHHHHHHHC--------CCCCCHHHHHHHHHHHHCCEECCC----CCCCCCCCC
T ss_conf 89-----------9963223439999999999970--------875323779999999866864687----644434667
Q ss_pred ----CCCCCC--C--EEEEEE--CCC--CEEEEEC--CCCCCCCCCHHHHHHHHHHHHH
Q ss_conf ----156522--1--103343--785--1799875--3207789848999999999999
Q gi|254780186|r 256 ----GKSGVG--G--GILAIV--PSK--ASIAVWS--PGLDNSGNSLLGAKALELLAIR 300 (311)
Q Consensus 256 ----aKSGVg--G--gilavv--Pg~--~gIav~S--P~LD~~GNSv~G~~~le~ls~~ 300 (311)
.|+|=. + ..+++| |+. +-|+|+. |.-|...+. .++..+++.
T Consensus 206 ~~v~~KtG~~~~~~~~d~giv~~~~g~~yii~v~~~~~~~~~~~~~----~~i~~i~~~ 260 (266)
T d1bsga_ 206 WTLGDKTGAGRYGTNNDAGVTWPPGRAPIVLTVLTAKTEQDAARDD----GLVADAARV 260 (266)
T ss_dssp SEEEEEEEECSTTCEEEEEEEECTTSCCEEEEEEEECSSTTCCCCH----HHHHHHHHH
T ss_pred CEEEEECCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCHHHHH----HHHHHHHHH
T ss_conf 5578740777877268999999389988999999168987867899----999999999
No 21
>d1e25a_ e.3.1.1 (A:) beta-Lactamase, class A {Pseudomonas aeruginosa, PER-1 [TaxId: 287]}
Probab=82.35 E-value=0.31 Score=25.88 Aligned_cols=42 Identities=21% Similarity=0.231 Sum_probs=34.2
Q ss_pred HHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 47028998089-97887668786401999999999999996112
Q gi|254780186|r 36 DHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFD 78 (311)
Q Consensus 36 ~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G 78 (311)
-..||+|...+ |+.++. ..+.+|+..|++|++++..+++...
T Consensus 17 ~~~~v~v~d~~~~~~~~~-n~~~~~p~AS~~Kl~~~~~~l~~i~ 59 (278)
T d1e25a_ 17 ATVGVAVWGPDDLEPLLI-NPFEKFPMQSVFKLHLAMLVLHQVD 59 (278)
T ss_dssp SEEEEEEECTTCSSCEEE-STTCCEECGGGHHHHHHHHHHHHHH
T ss_pred CEEEEEEEECCCCCEEEE-CCCCEECCHHHHHHHHHHHHHHHHH
T ss_conf 809999998899818987-8997066289999999999999998
No 22
>d1w5da1 e.3.1.3 (A:5-462) Penicillin-binding protein DacC {Bacillus subtilis [TaxId: 1423]}
Probab=82.25 E-value=0.75 Score=23.36 Aligned_cols=48 Identities=15% Similarity=0.146 Sum_probs=41.0
Q ss_pred HHCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC-HHHHH
Q ss_conf 47028998089-97887668786401999999999999996112-89999
Q gi|254780186|r 36 DHFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFD-EEIWK 83 (311)
Q Consensus 36 ~~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G-~~V~~ 83 (311)
..+||.|.+.+ |++.-.-+.+.+|.--|+.|.|+-+.||+.+| +.-|+
T Consensus 20 ~~~gi~V~d~~tg~~l~~~n~~~~~~PAS~~Kl~TtaaAL~~LGpd~rf~ 69 (458)
T d1w5da1 20 AMAGITVRSAETGAVLYEHSGDTRMRPASSLKLLTAAAALSVLGENYSFT 69 (458)
T ss_dssp CEEEEEEEETTTCCEEEEESTTSCBCCGGGGHHHHHHHHHHHHCTTCCCE
T ss_pred CEEEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 75999999899998942328998758569999999999999619987378
No 23
>d2cc1a1 e.3.1.1 (A:27-293) beta-Lactamase, class A {Mycobacterium fortuitum [TaxId: 1766]}
Probab=80.18 E-value=0.71 Score=23.52 Aligned_cols=209 Identities=16% Similarity=0.168 Sum_probs=102.8
Q ss_pred CEEEEEE-CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCH---HHHHHHCCCCCCCCCH-HHHHHHCCCCCCCCCCH
Q ss_conf 0289980-89978876687864019999999999999961128---9999946576567720-44420114898476311
Q gi|254780186|r 38 FGMSLAL-EDGTVYSVGESEFLFSIQSISKVFLLTIALRKFDE---EIWKRVGREPSGSSFD-SIVQLENENGIPRNPFV 112 (311)
Q Consensus 38 fgiai~t-~dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G~---~V~~~VG~ePSg~~FN-Si~~Le~~~g~P~NPmi 112 (311)
.||++.+ .+|+++.. +.+.+|+.-|+.|++++..++++..+ ..-++|-.++...... ++.. ...|....
T Consensus 18 ~gv~v~dl~tG~~~~~-n~d~~~~~AS~~Kl~~a~~~l~~~~~g~~~~~~~v~~~~~~~~~~~~~~~--~~~g~~~~--- 91 (262)
T d2cc1a1 18 IGLYAANLQSGRRITH-RPDEMFAMCSTFKGYVAARVLQMAEHGEISLDNRVFVDADALVPNSPVTE--ARAGAEMT--- 91 (262)
T ss_dssp EEEEEEETTTCCEEEE-STTSCEECGGGHHHHHHHHHHHHHHTTSSCTTCEEECCGGGCCSSCHHHH--TTTTSEEE---
T ss_pred EEEEEEECCCCCEEEE-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCEE--CCCCCCEE---
T ss_conf 9999998999988888-89975763789999999999998660676667349985656137897232--26887255---
Q ss_pred HHHHHHHHHHHCCCCCHHHHHH----------HHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 1379999986448888899999----------999999987289986247899998511241279999999827888899
Q gi|254780186|r 113 NAGAIVVSDAVLGSSSADDAIE----------NFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRYK 182 (311)
Q Consensus 113 NAGAI~~~sli~~~~~~~~~~~----------~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~d 182 (311)
-.-++-..++.. + ..... .+-++++++ |-....++...... | ....
T Consensus 92 -~~~ll~~mi~~S--d-N~A~~~L~~~~gg~~~~~~~~~~~-G~~~t~~~~~~~~~-------~----------~~~~-- 147 (262)
T d2cc1a1 92 -LAELCQAALQRS--D-NTAANLLLKTIGGPAAVTAFARSV-GDERTRLDRWEVEL-------N----------SAIP-- 147 (262)
T ss_dssp -HHHHHHHHHHSC--C-HHHHHHHHHHHTHHHHHHHHHHHT-TCCSCCCCSCTTGG-------G----------GCCT--
T ss_pred -HHHHHHHHHHHC--C-HHHHHHHHHHHCCCHHHHHHHHHC-CCCCEEECCCCCCC-------C----------CCCC--
T ss_conf -999999998745--3-799999999819951766889873-98651432233334-------6----------7889--
Q ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC------C
Q ss_conf 8999999998730000799999999998259707778875518999977554454113312566789870787------1
Q gi|254780186|r 183 IEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFP------G 256 (311)
Q Consensus 183 v~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlP------a 256 (311)
....-..|.+|++++-.-|.++ ..++++.......+|..+.... .+-++| .
T Consensus 148 ---------~~~~~~~T~~d~~~l~~~l~~~--------~~~~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~v~~ 204 (262)
T d2cc1a1 148 ---------GDPRDTSTPAALAVGYRAILAG--------DALSPPQRGLLEDWMRANQTSS------MRAGLPEGWTTAD 204 (262)
T ss_dssp ---------TCCTTEECHHHHHHHHHHHHHS--------SSSCHHHHHHHHHHHHTCSCCS------GGGGSCTTCEEEE
T ss_pred ---------CCCCCCCCHHHHHHHHHHHHCC--------CCCCHHHHHHHHHHHHCCEECC------CCCCCCCCCEEEE
T ss_conf ---------9876741999999999999658--------7568899999999984080245------3445677864889
Q ss_pred CCCCCC--E--EEEEE--C-CC-CEEEEEC--CCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 565221--1--03343--7-85-1799875--32077898489999999999994
Q gi|254780186|r 257 KSGVGG--G--ILAIV--P-SK-ASIAVWS--PGLDNSGNSLLGAKALELLAIRT 301 (311)
Q Consensus 257 KSGVgG--g--ilavv--P-g~-~gIav~S--P~LD~~GNSv~G~~~le~ls~~l 301 (311)
|.|-+. + .++++ | |+ +-++|+. |.-|... -...+++..+++.+
T Consensus 205 KtG~~~~~~~~dvg~v~~~~g~~~i~~V~~~~~~~~~~~--~~~~~li~~isr~v 257 (262)
T d2cc1a1 205 KTGSGDYGSTNDAGIAFGPDGQRLLLVMMTRSQAHDPKA--ENLRPLIGELTALV 257 (262)
T ss_dssp EEEECSTTCEEEEEEEECTTSCEEEEEEEEEESSSCTTC--CCCHHHHHHHHHHH
T ss_pred EEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCH--HHHHHHHHHHHHHH
T ss_conf 771368887888999995899889999996789877168--99999999999999
No 24
>d1g6aa_ e.3.1.1 (A:) beta-Lactamase, class A {Pseudomonas aeruginosa, PSE-4 carbenicillinase [TaxId: 287]}
Probab=79.33 E-value=0.66 Score=23.72 Aligned_cols=215 Identities=14% Similarity=0.170 Sum_probs=101.6
Q ss_pred HCEEEEEEC-CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--H-HHHHHHCCCCCCCCCH-HHHHHHCCCCCCCCCC
Q ss_conf 702899808-997887668786401999999999999996112--8-9999946576567720-4442011489847631
Q gi|254780186|r 37 HFGMSLALE-DGTVYSVGESEFLFSIQSISKVFLLTIALRKFD--E-EIWKRVGREPSGSSFD-SIVQLENENGIPRNPF 111 (311)
Q Consensus 37 ~fgiai~t~-dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G--~-~V~~~VG~ePSg~~FN-Si~~Le~~~g~P~NPm 111 (311)
..||++.+. +|+++.. +.+.+|+.-|+.|+++...++++.. + ...++|-..++...-. ++.. ...|....
T Consensus 20 ~~~v~v~D~~tg~~~~~-n~~~~~p~AS~~Kl~~a~~~l~~~~~g~l~~~~~i~~~~~~~~~~s~~~~--~~~g~~~t-- 94 (266)
T d1g6aa_ 20 RIGVSVLDTQNGEYWDY-NGNQRFPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIE--KQVGQAIT-- 94 (266)
T ss_dssp EEEEEEEETTTTEEEEE-STTSCEECGGGGHHHHHHHHHHHHHTTSCCTTCEEECCGGGCCSSCTTGG--GCTTSEEE--
T ss_pred EEEEEEEECCCCCEEEE-CCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHCCCCCCCC--CCCCCEEE--
T ss_conf 49999998999988998-89970543689999999999999973898754317863999327998301--45886167--
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHH----------HHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 11379999986448888899999----------99999998728998624789999851124127999999982788889
Q gi|254780186|r 112 VNAGAIVVSDAVLGSSSADDAIE----------NFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIRY 181 (311)
Q Consensus 112 iNAGAI~~~sli~~~~~~~~~~~----------~i~~~~~~lag~~~i~~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~ 181 (311)
-.-+....+..+. ....+ .+-++++++ |.....+....-. .......
T Consensus 95 --~~dLl~~mi~~Sd---N~A~~~L~~~lGg~~~~~~~~~~~-g~~~~~~~~~~~~-----------------~~~~~~~ 151 (266)
T d1g6aa_ 95 --LDDACFATMTTSD---NTAANIILSAVGGPKGVTDFLRQI-GDKETRLDRIEPD-----------------LNEGKLG 151 (266)
T ss_dssp --HHHHHHHHHHHCC---HHHHHHHHHHTTHHHHHHHHHHHT-TCSSCBCCCCTTG-----------------GGCCCTT
T ss_pred --HHHHHHHHHHCCH---HHHHHHHHHHHCCCHHHHHHHHHH-CCHHHHCCCCCCC-----------------CCCCCCC
T ss_conf --9999999981888---899999999848937889999981-6201100156676-----------------6678899
Q ss_pred CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC--CCCCC
Q ss_conf 9899999999873000079999999999825970777887551899997755445411331256678987078--71565
Q gi|254780186|r 182 KIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGF--PGKSG 259 (311)
Q Consensus 182 dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGl--PaKSG 259 (311)
+. --..|..+++++..-|+++. .+++.....+...|..+--++.--....--|. -.|+|
T Consensus 152 ~~-----------~n~tTa~~~a~ll~~l~~~~--------~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~v~~KTG 212 (266)
T d1g6aa_ 152 DL-----------RDTTTPKAIASTLNKFLFGS--------ALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADKSG 212 (266)
T ss_dssp CC-----------TTEECHHHHHHHHHHHHHSS--------SSCHHHHHHHHHHHHTCSSCTTTGGGGCCTTCEEEEEEE
T ss_pred CC-----------CCEECHHHHHHHHHHHHHCC--------CCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEEEC
T ss_conf 97-----------67197999999999998578--------756889999999996681065322223588864788768
Q ss_pred CC--C--EEEEEE--CCC--CEEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 22--1--103343--785--17998753207789848999999999999
Q gi|254780186|r 260 VG--G--GILAIV--PSK--ASIAVWSPGLDNSGNSLLGAKALELLAIR 300 (311)
Q Consensus 260 Vg--G--gilavv--Pg~--~gIav~SP~LD~~GNSv~G~~~le~ls~~ 300 (311)
-. | ...+++ |+. +-|+|+.-.- ..+.-....++..+++.
T Consensus 213 ~~~~~~~~~~~i~~~~~~~~yiv~V~~~~~--~~~~~~~~~~i~~i~~~ 259 (266)
T d1g6aa_ 213 AGGFGARSITAVVWSEHQAPIIVSIYLAQT--QASMEERNDAIVKIGHS 259 (266)
T ss_dssp ECGGGCEEEEEEEEETTEEEEEEEEEEESC--CCCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEEEECCCCCEEEEEEEECCC--CCCHHHHHHHHHHHHHH
T ss_conf 468787578999982899889999991699--88878999999999999
No 25
>d2drwa1 e.3.1.1 (A:2-363) D-Amino acid amidase DaaA {Ochrobactrum anthropi [TaxId: 529]}
Probab=79.13 E-value=1.6 Score=21.22 Aligned_cols=57 Identities=32% Similarity=0.419 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHCEEEE-EECCCCE-E--EEC----------CCCCCCCHHHHHHH
Q ss_conf 97999999999997760799999828332059824702899-8089978-8--766----------87864019999999
Q gi|254780186|r 2 DLKKIIDGIYEEIKPQIGQGRVADYIPELAKVRIDHFGMSL-ALEDGTV-Y--SVG----------ESEFLFSIQSISKV 67 (311)
Q Consensus 2 d~~~~l~~~~~~~~~~~~~G~vA~YIP~La~vdp~~fgiai-~t~dG~~-~--~~G----------D~~~~FsiqSisK~ 67 (311)
|+++-++.++++.. ..|. .|++| +..+|++ + ..| +.++.|.|-|+||+
T Consensus 2 ~~~~~i~~~~~~~~---~~g~---------------~g~~v~v~~~g~~v~~~~~G~ad~~~~~p~t~dt~f~i~SvsK~ 63 (362)
T d2drwa1 2 DLNNAIQGILDDHV---ARGV---------------VGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIASCTKS 63 (362)
T ss_dssp HHHHHHHHHHHHHH---TTTC---------------CEEEEEEECTTSCEEEEEEEEEETTTTEECCTTCBEECGGGHHH
T ss_pred CHHHHHHHHHHHHH---HCCC---------------CEEEEEEEECCEEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHH
T ss_conf 57899999999997---7599---------------72899999999999998578820566987999986971156899
Q ss_pred HHHHHHHHH
Q ss_conf 999999961
Q gi|254780186|r 68 FLLTIALRK 76 (311)
Q Consensus 68 f~l~~al~~ 76 (311)
|+-.+++..
T Consensus 64 ~ta~~i~~l 72 (362)
T d2drwa1 64 FIATGLHLL 72 (362)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999999
No 26
>d1onha_ e.3.1.1 (A:) AMPC beta-Lactamase, class C {Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]}
Probab=79.05 E-value=1.5 Score=21.35 Aligned_cols=23 Identities=30% Similarity=0.348 Sum_probs=17.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 87864019999999999999961
Q gi|254780186|r 54 ESEFLFSIQSISKVFLLTIALRK 76 (311)
Q Consensus 54 D~~~~FsiqSisK~f~l~~al~~ 76 (311)
+.++.|.|-|+||+|+-.+++..
T Consensus 54 ~~dT~f~iaSitK~~ta~~i~~L 76 (363)
T d1onha_ 54 TPQTLFELGSISKTFTGVLGGDA 76 (363)
T ss_dssp CTTCBEECGGGHHHHHHHHHHHH
T ss_pred CCCCEEEEEEHHHHHHHHHHHHH
T ss_conf 99997872055999999999999
No 27
>d1w79a1 e.3.1.3 (A:1-467) D-alanyl-D-alanine carboxypeptidase Dac {Actinomadura sp. [TaxId: 1989]}
Probab=76.92 E-value=1.3 Score=21.80 Aligned_cols=48 Identities=15% Similarity=0.091 Sum_probs=41.8
Q ss_pred HHCEEEEEEC-CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC-HHHHH
Q ss_conf 4702899808-997887668786401999999999999996112-89999
Q gi|254780186|r 36 DHFGMSLALE-DGTVYSVGESEFLFSIQSISKVFLLTIALRKFD-EEIWK 83 (311)
Q Consensus 36 ~~fgiai~t~-dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G-~~V~~ 83 (311)
..+||.|.+. +|++.-.-+.+..|.--|+.|.|+-+.||+.+| +.-|+
T Consensus 21 a~~gi~V~d~~tg~~l~~~n~~~~~~PAS~~Kl~Ta~aAL~~LG~d~rf~ 70 (467)
T d1w79a1 21 AVSGVVVVDTATGEELYSRDGGEQLLPASNMKLFTAAAALEVLGADHSFG 70 (467)
T ss_dssp CEEEEEEEETTTCCEEEEESTTCCBCCGGGHHHHHHHHHHHHTCTTCEEE
T ss_pred CEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 74899999899999965508998658669999999999998619997688
No 28
>d1es5a_ e.3.1.1 (A:) D-ala carboxypeptidase/transpeptidase {Streptomyces sp., K15 [TaxId: 1931]}
Probab=74.22 E-value=2.7 Score=19.75 Aligned_cols=103 Identities=17% Similarity=0.160 Sum_probs=56.0
Q ss_pred EEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC---HH-------HHHH-HCCCCCCCCCH-----HHHHHHC
Q ss_conf 2899808997887668786401999999999999996112---89-------9999-46576567720-----4442011
Q gi|254780186|r 39 GMSLALEDGTVYSVGESEFLFSIQSISKVFLLTIALRKFD---EE-------IWKR-VGREPSGSSFD-----SIVQLEN 102 (311)
Q Consensus 39 giai~t~dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G---~~-------V~~~-VG~ePSg~~FN-----Si~~Le~ 102 (311)
++.+-...|+++-.=+.+.++++-|++|+++..++|++.. ++ ..++ ...+.|.-++. ++.+|-.
T Consensus 9 aiv~D~~tG~vL~~kna~~~~~~AS~tKlmTa~v~l~~~~~~ld~~vti~~~~~~~~~~~~~s~~~l~~G~~~tv~dLl~ 88 (260)
T d1es5a_ 9 GYAMNNGTGTTLYTKAADTRRSTGSTTKIMTAKVVLAQSNLNLDAKVTIQKAYSDYVVANNASQAHLIVGDKVTVRQLLY 88 (260)
T ss_dssp EEEEETTTCCEEEEESTTCCBCCGGGGHHHHHHHHHTCTTCCTTCEEECCHHHHHHHHHTTCCCCCCCTTCEEEHHHHHH
T ss_pred EEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHCCCCCEEECCCCCCHHHHHHHH
T ss_conf 99999999959345790998577899999999999981899977669985766556650787302000233211999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 489847631113799999864488888999999999999872
Q gi|254780186|r 103 ENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENFLNFMRGIA 144 (311)
Q Consensus 103 ~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i~~~~~~la 144 (311)
- -.-+=-|-.|++++..+.+........+.+.+.+++.+
T Consensus 89 ~---~li~S~NdAA~aLAe~~~gg~~~~gs~~~Fv~~MN~~A 127 (260)
T d1es5a_ 89 G---LMLPSGCDAAYALADKYGSGSTRAARVKSFIGKMNTAA 127 (260)
T ss_dssp H---HHSSCCHHHHHHHHHHHSCSSSHHHHHHHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 9---99987439999999983588511020999999999999
No 29
>d1ci9a_ e.3.1.1 (A:) Esterase EstB {Burkholderia gladioli [TaxId: 28095]}
Probab=69.59 E-value=2.7 Score=19.72 Aligned_cols=57 Identities=21% Similarity=0.409 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHCEEEE-EECCCCEE-E--EC----------CCCCCCCHHHHHHHH
Q ss_conf 7999999999997760799999828332059824702899-80899788-7--66----------878640199999999
Q gi|254780186|r 3 LKKIIDGIYEEIKPQIGQGRVADYIPELAKVRIDHFGMSL-ALEDGTVY-S--VG----------ESEFLFSIQSISKVF 68 (311)
Q Consensus 3 ~~~~l~~~~~~~~~~~~~G~vA~YIP~La~vdp~~fgiai-~t~dG~~~-~--~G----------D~~~~FsiqSisK~f 68 (311)
+++.|++++++... ++++ | |+++ +..||++. . .| +.++.|.|-|+||+|
T Consensus 4 l~~~id~~~~~~~~---~~~~----p----------G~~~~V~~~g~~v~~~~~G~ad~~~~~~~~~~t~f~iaSvtK~~ 66 (377)
T d1ci9a_ 4 LAARLDAVFDQALR---ERRL----V----------GAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLASVTKPI 66 (377)
T ss_dssp HHHHHHHHHHHHHH---TTSC----S----------EEEEEEEETTEEEEEEEEEEEETTTTEECCTTCBEECGGGHHHH
T ss_pred HHHHHHHHHHHHHH---HCCC----C----------EEEEEEEECCEEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHH
T ss_conf 89999999999998---2898----7----------59999999999999984786244559889999868603268999
Q ss_pred HHHHHHHH
Q ss_conf 99999961
Q gi|254780186|r 69 LLTIALRK 76 (311)
Q Consensus 69 ~l~~al~~ 76 (311)
+-.+++..
T Consensus 67 ta~~v~~L 74 (377)
T d1ci9a_ 67 VALAVLRL 74 (377)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999999
No 30
>d2hdsa1 e.3.1.1 (A:4-361) AMPC beta-Lactamase, class C {Escherichia coli, cephalosporinase [TaxId: 562]}
Probab=68.93 E-value=3.5 Score=19.04 Aligned_cols=68 Identities=19% Similarity=0.295 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHCEEEEEECCCCEEEE--C----------CCCCCCCHHHHHHHHHH
Q ss_conf 79999999999977607999998283320598247028998089978876--6----------87864019999999999
Q gi|254780186|r 3 LKKIIDGIYEEIKPQIGQGRVADYIPELAKVRIDHFGMSLALEDGTVYSV--G----------ESEFLFSIQSISKVFLL 70 (311)
Q Consensus 3 ~~~~l~~~~~~~~~~~~~G~vA~YIP~La~vdp~~fgiai~t~dG~~~~~--G----------D~~~~FsiqSisK~f~l 70 (311)
+++.+++.+++.... +.+ | ..+++|. .+|+++.. | +.++.|.|-|+||+|+-
T Consensus 5 ~~~~v~~~i~~~~~~---~~i----p--------G~~v~v~-~~g~~~~~~~G~~~~~~~~~~~~dt~f~iaS~tK~~ta 68 (358)
T d2hdsa1 5 INDIVHRTITPLIEQ---QKI----P--------GMAVAVI-YQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTG 68 (358)
T ss_dssp HHHHHHHHHHHHHHH---HTC----S--------EEEEEEE-ETTEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHH---CCC----C--------EEEEEEE-ECCEEEEEEEEEECCCCCCCCCCCCEEECCCHHHHHHH
T ss_conf 999999999999983---899----8--------6999999-99999999688602566988999997863045999999
Q ss_pred HHHHH--HCC----HH-HHHHHC
Q ss_conf 99996--112----89-999946
Q gi|254780186|r 71 TIALR--KFD----EE-IWKRVG 86 (311)
Q Consensus 71 ~~al~--~~G----~~-V~~~VG 86 (311)
.+++. +.| ++ |-+++-
T Consensus 69 ~~i~~lv~~G~l~ld~~v~~ylp 91 (358)
T d2hdsa1 69 VLGGDAIARGEIKLSDPTTKYWP 91 (358)
T ss_dssp HHHHHHHHTTSCCTTSBHHHHCT
T ss_pred HHHHHHHHCCCCCCCHHHHHHCC
T ss_conf 99999975598642300010000
No 31
>d2ex2a1 e.3.1.3 (A:22-477) DD-carboxypeptidase DacB {Escherichia coli [TaxId: 562]}
Probab=68.75 E-value=1.8 Score=20.86 Aligned_cols=47 Identities=13% Similarity=0.009 Sum_probs=39.3
Q ss_pred HCEEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC-HHHHH
Q ss_conf 7028998089-97887668786401999999999999996112-89999
Q gi|254780186|r 37 HFGMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKFD-EEIWK 83 (311)
Q Consensus 37 ~fgiai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~G-~~V~~ 83 (311)
.+||.|.+.+ |+..-.=..+++|.--|+.|.|+-+.||+.+| +..|+
T Consensus 14 ~~gi~v~d~~~g~~l~~~n~~~~~~PAS~~Kl~Tt~aAL~~LGpd~rf~ 62 (456)
T d2ex2a1 14 NLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFT 62 (456)
T ss_dssp EEEEEEEETTCSSCSEEESTTSCBCCGGGHHHHHHHHHHHHTCTTCCCE
T ss_pred EEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 6999999899998888867998658669999999999998619987698
No 32
>d1xa1a_ e.3.1.1 (A:) Regulatory protein BlaR1 {Staphylococcus aureus [TaxId: 1280]}
Probab=68.73 E-value=2.3 Score=20.17 Aligned_cols=94 Identities=14% Similarity=0.050 Sum_probs=56.0
Q ss_pred HHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC---E-----
Q ss_conf 87300007999999999982597077788755189999775544541133125667898707871565221---1-----
Q gi|254780186|r 192 HQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFPGKSGVGG---G----- 263 (311)
Q Consensus 192 ~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlPaKSGVgG---g----- 263 (311)
-+=++.+|..++|.+.++|||+|. .+++++++.++.+|...--.. ..+-+|.|.+. .
T Consensus 139 ~~g~~~vTPlq~a~~~~~ian~g~-------~~sp~~~~~~~~~m~~~~~~g--------~~vagKTGT~~~~~~~~~~W 203 (246)
T d1xa1a_ 139 MEDSLKISNLEQVIVFKNMMEQNN-------HFSKKAKNQLSSSLLIKKNEK--------YELYGKTGTGIVNGKYNNGW 203 (246)
T ss_dssp SSSSCCEEHHHHHHHHHHHHC--C-------CSCHHHHHHHHHHHEEEECSS--------EEEEEEEEEEEETTEEEEEE
T ss_pred HCCCCCCCHHHHHHHHHHHHCCCC-------CCCHHHHHHHHHHHHHHHHHH--------HHHHHHCCCCCCCCCCCCEE
T ss_conf 426421349999999999973999-------888899999999998876521--------45654245665689977489
Q ss_pred EEEEEC---CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 033437---851799875320778984899999999999948
Q gi|254780186|r 264 ILAIVP---SKASIAVWSPGLDNSGNSLLGAKALELLAIRTG 302 (311)
Q Consensus 264 ilavvP---g~~gIav~SP~LD~~GNSv~G~~~le~ls~~l~ 302 (311)
.++-+| .+..++++-.. .+.|.++++- ..+.+-+.++
T Consensus 204 FvG~~p~~~p~~~~av~v~~-~~~~~~~a~~-i~~~il~~l~ 243 (246)
T d1xa1a_ 204 FVGYVITNHDKYYFATHLSD-GKPSGKNAEL-ISEKILKEMG 243 (246)
T ss_dssp EEEEEEESSCEEEEEEEEEE-SSCCHHHHHH-HHHHHHHHTT
T ss_pred EEEEEECCCCEEEEEEEEEC-CCCCCHHHHH-HHHHHHHHCC
T ss_conf 99999869982999999867-9978718999-9999999726
No 33
>d1tvfa2 e.3.1.1 (A:15-315) Pencillin binding protein 4 (PbpD), N-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=68.00 E-value=2.5 Score=20.01 Aligned_cols=39 Identities=10% Similarity=0.135 Sum_probs=32.8
Q ss_pred EEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 289980899788766878640199999999999999611
Q gi|254780186|r 39 GMSLALEDGTVYSVGESEFLFSIQSISKVFLLTIALRKF 77 (311)
Q Consensus 39 giai~t~dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~ 77 (311)
++-+....|+++-.=+.+.++++-|++|+++..++++..
T Consensus 37 a~iv~~~TG~VLy~kNa~~~~~pAS~tKlMTa~v~le~i 75 (301)
T d1tvfa2 37 SAVNVSQTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAV 75 (301)
T ss_dssp EEEEEETTSBEEEEESTTCCBCCGGGHHHHHHHHHHHHH
T ss_pred EEEEECCCCCEEHEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 699996889480116839983856999999999999987
No 34
>d3beca2 e.3.1.1 (A:4-262) Penicillin-binding protein 5, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=59.03 E-value=4.5 Score=18.32 Aligned_cols=39 Identities=13% Similarity=0.094 Sum_probs=32.2
Q ss_pred EEEEEECC-CCEEEECCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 28998089-9788766878640199999999999999611
Q gi|254780186|r 39 GMSLALED-GTVYSVGESEFLFSIQSISKVFLLTIALRKF 77 (311)
Q Consensus 39 giai~t~d-G~~~~~GD~~~~FsiqSisK~f~l~~al~~~ 77 (311)
+..+.+.+ |++.-.=+.+.+.++-|++|+++..++++..
T Consensus 16 saiv~D~~tg~vL~~kn~~~~~~~ASlTKlMTa~v~l~~~ 55 (259)
T d3beca2 16 SYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAM 55 (259)
T ss_dssp EEEEEETTTCCEEEEESTTCCBCCGGGHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 9999999999691547909982776999999999999988
No 35
>d1ei5a3 e.3.1.1 (A:3-335) D-aminopeptidase, N-terminal domain {Ochrobactrum anthropi [TaxId: 529]}
Probab=57.73 E-value=3.2 Score=19.27 Aligned_cols=68 Identities=22% Similarity=0.316 Sum_probs=35.2
Q ss_pred EEEEE-ECCCCE-EE--EC----------CCCCCCCHHHHHHHHHHHHHHHHC--C----HHHHHHHCCCCCCCCCHHHH
Q ss_conf 28998-089978-87--66----------878640199999999999999611--2----89999946576567720444
Q gi|254780186|r 39 GMSLA-LEDGTV-YS--VG----------ESEFLFSIQSISKVFLLTIALRKF--D----EEIWKRVGREPSGSSFDSIV 98 (311)
Q Consensus 39 giai~-t~dG~~-~~--~G----------D~~~~FsiqSisK~f~l~~al~~~--G----~~V~~~VG~ePSg~~FNSi~ 98 (311)
|++|. ..||++ +. .| +.++.|.|-|+||+|+-.+++... | +.|-+++..-|.... .|.
T Consensus 22 G~sv~V~~~g~~v~~~~~G~~d~~~~~~~~~dt~f~i~SvsK~~ta~~v~~lv~~G~lldd~v~~~lp~~~~~~i--Ti~ 99 (333)
T d1ei5a3 22 GGVVAVVKDGEVVLQHAWGFADLRTRTPMTLDTRMPICSVSKQFTCAVLLDAVGEPELLDDALEAYLDKFEDERP--AVR 99 (333)
T ss_dssp EEEEEEEETTEEEEEEEEEEEETTTTEECCTTCCEECGGGHHHHHHHHHHHHTCSGGGGHHHHHHHTTTCCSCCC--CHH
T ss_pred CEEEEEEECCEEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHH--HHC
T ss_conf 489999999999999857663355699899999886024499999999999984388766346553120000122--204
Q ss_pred HHHC-CCCCCC
Q ss_conf 2011-489847
Q gi|254780186|r 99 QLEN-ENGIPR 108 (311)
Q Consensus 99 ~Le~-~~g~P~ 108 (311)
+|-. ..|.|.
T Consensus 100 ~LL~htSGl~~ 110 (333)
T d1ei5a3 100 DLCNNQSGLRD 110 (333)
T ss_dssp HHHTTCSCCCC
T ss_pred CCCCCCCCCCC
T ss_conf 33655788866
No 36
>d1yqsa1 e.3.1.1 (A:3-347) D-ala carboxypeptidase/transpeptidase {Streptomyces sp., R61 [TaxId: 1931]}
Probab=51.34 E-value=4.5 Score=18.29 Aligned_cols=76 Identities=13% Similarity=0.046 Sum_probs=41.3
Q ss_pred HHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHH---HHC--CCCCCCCCCE---EEE
Q ss_conf 00007999999999982597077788755189999775544541133125667898---707--8715652211---033
Q gi|254780186|r 195 SLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAY---RVG--FPGKSGVGGG---ILA 266 (311)
Q Consensus 195 si~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~---~VG--lPaKSGVgGg---ila 266 (311)
.+-.|++||++.+..|.|+ ++++++..+.....-....-+.+.--|.. .-| +-.++|-.|| .+.
T Consensus 237 gl~st~~Dla~~~~~l~~~--------~~l~~~~~~~~~~~~~~~~~~~yG~G~~~~~~~~g~~~~~H~G~~~G~~s~~~ 308 (345)
T d1yqsa1 237 AVISSTQDLDTFFSALMSG--------QLMSAAQLAQMQQWTTVNSTQGYGLGLRRRDLSCGISVYGHTGTVQGYYTYAF 308 (345)
T ss_dssp CCEECHHHHHHHHHHHHTT--------CSSCHHHHHHHTCCEEEETTEEECSSCEEEECTTSCEEEEEEEEETTEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHCC--------CCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCEEEEE
T ss_conf 5116899999999986558--------88889999997511257888861577885126899659982672688229999
Q ss_pred EECC-CCEEEEEC
Q ss_conf 4378-51799875
Q gi|254780186|r 267 IVPS-KASIAVWS 278 (311)
Q Consensus 267 vvPg-~~gIav~S 278 (311)
+.|. ..+|.+.+
T Consensus 309 ~~p~~~~~iv~l~ 321 (345)
T d1yqsa1 309 ASKDGKRSVTALA 321 (345)
T ss_dssp ECTTSSEEEEEEE
T ss_pred EEECCCEEEEEEE
T ss_conf 9976998999999
No 37
>d1hy5a_ a.24.11.1 (A:) YopE {Yersinia pestis [TaxId: 632]}
Probab=47.27 E-value=4.2 Score=18.53 Aligned_cols=30 Identities=17% Similarity=0.348 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHCEE
Q ss_conf 79999999999977607999998283320598247028
Q gi|254780186|r 3 LKKIIDGIYEEIKPQIGQGRVADYIPELAKVRIDHFGM 40 (311)
Q Consensus 3 ~~~~l~~~~~~~~~~~~~G~vA~YIP~La~vdp~~fgi 40 (311)
+.+.+..+..+..+ +|||||+++|++.|+=
T Consensus 3 ~~~~~~~l~~~~l~--------~~~~eL~~i~ae~L~k 32 (120)
T d1hy5a_ 3 FSDSIKQLAAETLP--------KYMQQLNSLDAEMLQK 32 (120)
T ss_dssp HHHHHHHHHHHHHH--------HHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHH--------HHHHHHHHCCHHHHHH
T ss_conf 88999999998857--------7889997038998864
No 38
>d1xp4a2 e.3.1.1 (A:25-293) D,D-carboxypeptidase DacA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=41.54 E-value=8.3 Score=16.59 Aligned_cols=39 Identities=13% Similarity=0.263 Sum_probs=31.4
Q ss_pred EEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 289980899788766878640199999999999999611
Q gi|254780186|r 39 GMSLALEDGTVYSVGESEFLFSIQSISKVFLLTIALRKF 77 (311)
Q Consensus 39 giai~t~dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~ 77 (311)
+|-+-...|+++-.=+.+.+.++-|++|+++..++++..
T Consensus 8 aiv~D~~tG~vL~~kn~~~~~~pAS~TKlmTa~v~le~l 46 (269)
T d1xp4a2 8 AIAVEANTGKILYEKDATQPVEIASITKLITVYLVYEAL 46 (269)
T ss_dssp EEEEETTTTEEEEEESCSSCEECGGGGHHHHHHHHHHHH
T ss_pred EEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 999999999790436929981878999999999999997
No 39
>d2ciwa1 a.39.3.1 (A:0-119) Cloroperoxidase {Fungus (Caldariomyces fumago) [TaxId: 5474]}
Probab=32.81 E-value=6.2 Score=17.41 Aligned_cols=44 Identities=20% Similarity=0.204 Sum_probs=29.0
Q ss_pred HHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
Q ss_conf 98259707778875518999977554454113312566789870787
Q gi|254780186|r 209 YLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFP 255 (311)
Q Consensus 209 ~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlP 255 (311)
+|||.|.-|-.|+.|--++.. .++...-+|...-..+++.-++.
T Consensus 35 aLANHGyLPrdG~nIt~~~l~---~a~~~~~n~~~~l~~~l~~~a~~ 78 (120)
T d2ciwa1 35 ALANHGYIPHDGRAISRETLQ---NAFLNHMGIANSVIELALTNAFV 78 (120)
T ss_dssp HHHHTTSSCTTCEEECHHHHH---HHHHHHHCBCHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCCCCCHHHHH---HHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 787468627887516899999---99998747458899999886674
No 40
>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.34 E-value=14 Score=15.11 Aligned_cols=39 Identities=15% Similarity=0.250 Sum_probs=33.3
Q ss_pred CCCCCCCCHHHHCCCHHHCEEEEEECCCCEEEECCCCCC
Q ss_conf 999998283320598247028998089978876687864
Q gi|254780186|r 20 QGRVADYIPELAKVRIDHFGMSLALEDGTVYSVGESEFL 58 (311)
Q Consensus 20 ~G~vA~YIP~La~vdp~~fgiai~t~dG~~~~~GD~~~~ 58 (311)
.-|.-+||=.|......+|+|.-++.||+++..=--+++
T Consensus 22 ~~kPGSYiFRlSCTrlGQWAIGyvt~dg~IlQTIp~nk~ 60 (88)
T d3buxb3 22 IHKPGSYIFRLSCTRLGQWAIGYVTADGNILQTIPHNKP 60 (88)
T ss_dssp TTSTTEEEEEECSSSTTSEEEEEECTTSCEEEECCSSCC
T ss_pred HCCCCCEEEEECCCCCCCEEEEEECCCCCEEEECCCCCH
T ss_conf 459973487420341252246666267745553267637
No 41
>d2ac0a1 b.2.5.2 (A:96-289) p53 tumor suppressor, DNA-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.73 E-value=3.4 Score=19.09 Aligned_cols=31 Identities=32% Similarity=0.739 Sum_probs=15.9
Q ss_pred HHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCC
Q ss_conf 25667898707871565221103343785179987532077
Q gi|254780186|r 243 DHSGDFAYRVGFPGKSGVGGGILAIVPSKASIAVWSPGLDN 283 (311)
Q Consensus 243 d~SG~fa~~VGlPaKSGVgGgilavvPg~~gIav~SP~LD~ 283 (311)
|+.|+|.|+|+++ +|+. .+..=.+|||.|++
T Consensus 7 ~ypG~y~F~v~~~-~~~~---------~ks~~wtyS~~LnK 37 (194)
T d2ac0a1 7 TYQGSYGFRLGFL-HSGT---------AKSVTCTYSPALNK 37 (194)
T ss_dssp CBCTTTTCEEEEC-CCCC---------CTTCSEEEETTTTE
T ss_pred CCCCCCCEEEECC-CCCC---------CCCCCEEECHHHCE
T ss_conf 7798552599816-8998---------77675484506587
No 42
>d1chka_ d.2.1.7 (A:) Endochitosanase {Streptomyces sp., strain N174 [TaxId: 1931]}
Probab=22.01 E-value=16 Score=14.77 Aligned_cols=46 Identities=9% Similarity=-0.106 Sum_probs=25.4
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf 3799999864488888999999999999872899862478999985
Q gi|254780186|r 114 AGAIVVSDAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSE 159 (311)
Q Consensus 114 AGAI~~~sli~~~~~~~~~~~~i~~~~~~lag~~~i~~d~~v~~SE 159 (311)
-+++.-+.+-.|.....+.|..|+....+.++.+.-.-||.-|...
T Consensus 140 ~~v~yDtaV~HG~g~~~~sf~~ir~r~~~~a~~pa~ggdE~~~l~a 185 (238)
T d1chka_ 140 QFAYYDAIVMHGPGNDPTSFGGIRKTAMKKARTPAQGGDETTYLNG 185 (238)
T ss_dssp HHHHHHHHHHHCSSSSTTSHHHHHHHHHHHSCCGGGTCCHHHHHHH
T ss_pred HHEEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 0202002444089875166999999998524898778689999999
Done!