RPSBLAST alignment of GI: 254780186 and SCOP domain: d1u60a_

Alignment

 Score =  386 bits (994), Expect = e-109
 Identities = 111/307 (36%), Positives = 174/307 (56%), Gaps = 4/307 (1%)

Query: 2   DLKKIIDGIYEEIKPQIGQGRVADYIPELAKVRIDHFGMSLALEDGTVYSVGESEFLFSI 61
            L++ +D  Y +    +  G+ ADYIP LA V      +++   DG VYS G+S++ F++
Sbjct: 5   KLQQAVDQAYTQFHS-LNGGQNADYIPFLANVPGQLAAVAIVTCDGNVYSAGDSDYRFAL 63

Query: 62  QSISKVFLLTIALRKF-DEEIWKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVS 120
           +SISKV  L +AL     + +  ++G +P+G  F+S++ LE   G P +P VNAGAI  +
Sbjct: 64  ESISKVCTLALALEDVGPQAVQDKIGADPTGLPFNSVIALELHGGKPLSPLVNAGAIATT 123

Query: 121 DAVLGSSSADDAIENFLNFMRGIAGDASIHIDSVVANSEIETGYRNFALANFVRSYGNIR 180
             ++ + + +   +  L+  + +AG+  + +   V  SE  T + N A+A  + S G + 
Sbjct: 124 S-LINAENVEQRWQRILHIQQQLAGE-QVALSDEVNQSEQTTNFHNRAIAWLLYSAGYLY 181

Query: 181 YKIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCG 240
               +    Y  QCS ++N ++LA  G  LA  G N LT++ V+       + A M+  G
Sbjct: 182 CDAMEACDVYTRQCSTLLNTIELATLGATLAAGGVNPLTHKRVLQADNVPYILAEMMMEG 241

Query: 241 HYDHSGDFAYRVGFPGKSGVGGGILAIVPSKASIAVWSPGLDNSGNSLLGAKALELLAIR 300
            Y  SGD+AYRVG PGKSGVGGGILA+VP    IA +SP LD  GNS+ G K +  +A +
Sbjct: 242 LYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGIAAFSPPLDEDGNSVRGQKMVASVAKQ 301

Query: 301 TGWSIFD 307
            G+++F 
Sbjct: 302 LGYNVFK 308

SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: beta-lactamase/transpeptidase-like
superfamily: beta-lactamase/transpeptidase-like
family: Glutaminase
domain: Probable glutaminase YbaS
species: Escherichia coli [TaxId: 562]