HHsearch alignment for GI: 254780187 and conserved domain: COG1187

>COG1187 RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].
Probab=97.08  E-value=0.0013  Score=44.09  Aligned_cols=53  Identities=26%  Similarity=0.385  Sum_probs=47.7

Q ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCC-EEEECCH
Q ss_conf             98888899862121247887887624978788889413534833884-7886110
Q gi|254780187|r   93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD-VIEVKQK  146 (206)
Q Consensus        93 E~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd-~I~~~~k  146 (206)
T Consensus         2 ~~RL~K~La~~G~~-SRr~ae~lI~~G~V~VnG~v~~~~~~~v~~~~~~i~v~g~   55 (248)
T COG1187           2 SMRLNKFLAEAGVG-SRREAEKLIEEGRVTVNGKVATLGGVVVDPDDDVVEVDGK   55 (248)
T ss_pred             CCCHHHHHHHCCCC-CHHHHHHHHHCCCEEECCEEECCCCEEECCCCCEEEECCE
T ss_conf             52068999874777-8899999997398788999922477672798768998998