HHsearch alignment for GI: 254780187 and conserved domain: KOG3301

>KOG3301 consensus.
Probab=99.82  E-value=3.9e-21  Score=157.79  Aligned_cols=130  Identities=18%  Similarity=0.171  Sum_probs=104.3

Q ss_pred             CCCCCCCE--EEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHH----HHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             97644871--2352005888888887700013689987765443341358999----99988485551565479999999
Q gi|254780187|r    1 MSKRESSK--HKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQ----LRAKQKMKKYYGDISEKKFRSIF   74 (206)
Q Consensus         1 M~r~~gpk--~K~~RrlG~~l~~~~k~~~~~r~~~pGqhg~~r~~k~S~yg~q----L~eKQKlr~~YG~~~ekq~~~~~   74 (206)
T Consensus         1 ~k~y~~PRrpfek~Rld~elkl~g~yglknk~elw----r~~~~l~K~r~aaR~ll~~k~p~rl-f~g~-allrrLvr~g   74 (183)
T KOG3301           1 SKTYKTPRRPFEKERLDAELKLVGEYGLKNKRELW----RVSRSLSKIRYAARELLDEKDPKRL-FEGN-ALLRRLVRYG   74 (183)
T ss_pred             CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHH----HHHHHHHHHHHHHHHHHCCCCHHHH-HCCH-HHHHHHHHHH
T ss_conf             98557898708888887660123212654305999----9999999999999986401267777-4000-8999999985


Q ss_pred             HHH---HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEEC
Q ss_conf             875---30334430268999998888899862121247887887624978788889413534833
Q gi|254780187|r   75 KEA---DRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCK  136 (206)
Q Consensus        75 ~~A---~~~~g~t~~~ll~~LE~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k  136 (206)
T Consensus        75 ~l~e~~~Kldyvl~l~ie~fLErRLqt~vFklGlAkSIhhARvLi~~rhI~V~~qiV~IPsf~vr  139 (183)
T KOG3301          75 VLDERKNKLDYVLALTVEDFLERRLQTIVFKLGLAKSIHHARVLIRQRHIRVGKQIVNIPSFMVR  139 (183)
T ss_pred             HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEECCCEEEE
T ss_conf             32012343137799899999999999999998665442788987427607615757624654566