HHsearch alignment for GI: 254780187 and conserved domain: PRK11025

>PRK11025 23S rRNA pseudouridylate synthase C; Provisional.
Probab=97.60  E-value=0.00012  Score=50.73  Aligned_cols=50  Identities=16%  Similarity=0.232  Sum_probs=43.5

Q ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEEC
Q ss_conf             888889986212124788788762497878888941353483388478861
Q gi|254780187|r   94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK  144 (206)
Q Consensus        94 ~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd~I~~~  144 (206)
T Consensus        20 ~RLD~fL~~~l~~~srs~i~klir~g~V~VNg~~v-k~~~~l~~GD~I~i~   69 (317)
T PRK11025         20 QRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRI-KPEYKLEAGDEVRIP   69 (317)
T ss_pred             CHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEC-CCCCCCCCCCEEEEC
T ss_conf             75999999756626999999999869989999995-710465799999988