HHsearch alignment for GI: 254780187 and conserved domain: PRK11025
>PRK11025 23S rRNA pseudouridylate synthase C; Provisional.
Probab=97.60 E-value=0.00012 Score=50.73 Aligned_cols=50 Identities=16% Similarity=0.232 Sum_probs=43.5
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEEC
Q ss_conf 888889986212124788788762497878888941353483388478861
Q gi|254780187|r 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVK 144 (206)
Q Consensus 94 ~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd~I~~~ 144 (206)
T Consensus 20 ~RLD~fL~~~l~~~srs~i~klir~g~V~VNg~~v-k~~~~l~~GD~I~i~ 69 (317)
T PRK11025 20 QRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRI-KPEYKLEAGDEVRIP 69 (317)
T ss_pred CHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEC-CCCCCCCCCCEEEEC
T ss_conf 75999999756626999999999869989999995-710465799999988