HHsearch alignment of GI: 254780187 and MMDB domain: 2k6p_A_
>2k6p_A (A:) Uncharacterized protein HP_1423; alpha-L motif, RNA-binding, unknown function; NMR {Helicobacter pylori}
Probab=98.67 E-value=3e-09 Score=80.28 Aligned_cols=54 Identities=24% Similarity=0.308 Sum_probs=50.0
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEECCHHH
Q ss_conf 8888899862121247887887624978788889413534833884788611002
Q gi|254780187|r 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK 148 (206)
Q Consensus 94 ~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd~I~~~~ksk 148 (206)
||||..+.+.+++.|+.+|+|+|.||+|.|||+++. ||+.|++||+|++.....
T Consensus 1 mRLD~~L~~~~~~~sr~~~~k~i~~g~I~VNg~~~~-~~~~v~~gD~i~i~~~~~ 54 (92)
T 2k6p_A 1 MRIDKFLQSVGLVKRRVLATDMCNVGAVWLNGSCAK-ASKEVKAGDTISLHYLKG 54 (92)
T ss_dssp CBHHHHSTTTTSCCCCCSSCCHHHHTCCEETTEECC-TTCBCCTTCEEEECCSSC
T ss_pred CCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEEE-ECCCCCCCCEEEEEECCC
T ss_conf 967899987277159999999998997998989986-624718999999984896