HHsearch alignment of GI: 254780187 and MMDB domain: 2vqe_D_100-193
>2vqe_D (D:100-193) 30S ribosomal protein S4; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus}
Probab=99.91 E-value=7.9e-25 Score=181.32 Aligned_cols=93 Identities=38% Similarity=0.630 Sum_probs=86.9
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEECCHHHHHHHHHHHHHHC-CCCCCCEEEECCC
Q ss_conf 888899862121247887887624978788889413534833884788611002269999877521-6899962788124
Q gi|254780187|r 95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA-ERDVPEYISVNHD 173 (206)
Q Consensus 95 RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd~I~~~~ksk~~~~i~~~~~~~-~~~~P~wLevd~~ 173 (206)
|||++|||+|||+|+++|||+|+||||+|||++|++|||.|++||+|++++.+.....+..+.+.. ...+|+||++|++
T Consensus 1 RLD~~l~r~~~~~Tr~~ArqlI~hg~V~VNg~~v~~ps~~v~~gD~I~i~~~~~~~~~~~~~~~~~~~~~~p~~le~~~~ 80 (94)
T 2vqe_D 1 RLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVE 80 (94)
T ss_dssp BHHHHHHHTTSSSSHHHHHHHHHTTCEEETTEECCCTTCBCCTTCEEEECGGGTTCHHHHHHHHHTTTCCCCTTCCEETT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHCCCEECCCEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC
T ss_conf 99999985352002898889987068450887997536785288600121101048999999976132789888573050
Q ss_pred CCEEEEEECCCCCC
Q ss_conf 31899996788421
Q gi|254780187|r 174 NMVATFVRIPSSLK 187 (206)
Q Consensus 174 ~l~g~v~~~P~r~e 187 (206)
.++|++++.|+++|
T Consensus 81 ~~~~~~~~~p~r~e 94 (94)
T 2vqe_D 81 GMKGKFLRLPDRED 94 (94)
T ss_dssp TTEEECCSCCCGGG
T ss_pred CCEEEEEECCCHHH
T ss_conf 18899994437888