HHsearch alignment of GI: 254780187 and MMDB domain: 3i1m_D_1-96_191-206
>3i1m_D (D:1-96,D:191-206) 30S ribosomal protein S4; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_D* 3e1a_R 3e1c_R 1vs5_D 3i1o_D 3i1q_D 3i1s_D 3i1z_D 3i21_D 2qal_D* 1p6g_D 1p87_D 2aw7_D 2avy_D 2i2u_D 2i2p_D* 2qan_D* 2qb9_D* 2qbb_D* 2qbd_D ...
Probab=99.97 E-value=1.3e-32 Score=231.91 Aligned_cols=94 Identities=37% Similarity=0.641 Sum_probs=87.8
Q ss_pred CCCCCCCEEEEEEECCCCCCCCCCCC----HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 97644871235200588888888770----00136899877654433413589999998848555156547999999987
Q gi|254780187|r 1 MSKRESSKHKIDRRIGENLWGRPKSP----VNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKE 76 (206)
Q Consensus 1 M~r~~gpk~K~~RrlG~~l~~~~k~~----~~~r~~~pGqhg~~r~~k~S~yg~qL~eKQKlr~~YG~~~ekq~~~~~~~ 76 (206)
||||+||++|+|||||++||+++|++ ..+++++|||||..+ +|+|+||+||+||||+||+|| ++|+||++||.+
T Consensus 1 MaRy~GPk~Ki~RRlG~~l~~~~K~~~~~~~~~r~~~pgqhg~~r-kK~SeYg~qL~EKQKlk~~YG-i~EkQfrryf~~ 78 (112)
T 3i1m_D 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARK-PRLSDYGVQLREKQKVRRIYG-VLERQFRNYYKE 78 (112)
T ss_dssp -CCCCSCHHHHHHHTTSCCSSSCSSSCSSCSSCCSSCSSSSTTSC-CCCCHHHHHHHHHHHHHHHHT-CCHHHHHHHHHH
T ss_pred CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHCC-CCHHHHHHHHHH
T ss_conf 996557675631027988666788865674334678999888878-761579999999998998707-873889999999
Q ss_pred HHHCCCCCCHHHHHHHHHHH
Q ss_conf 53033443026899999888
Q gi|254780187|r 77 ADRSRGDTSHNLISFLESRL 96 (206)
Q Consensus 77 A~~~~g~t~~~ll~~LE~RL 96 (206)
|.+++|+||+|||++||+-.
T Consensus 79 A~k~kG~TG~nLL~lLEs~~ 98 (112)
T 3i1m_D 79 AARLKGNTGENLLALLEGLS 98 (112)
T ss_dssp HHHSSSCHHHHHHHHHHHCC
T ss_pred HHHCCCCHHHHHHHHHHHCC
T ss_conf 98669967999999999989