HHsearch results for GI: 254780187 and protein with PDBid: 1dm9_A

>1dm9_A Hypothetical 15.5 KD protein in MRCA-PCKA intergenic region; heat shock proteins, protein-RNA interactions, ribosome, structural genomics; 2.00A {Escherichia coli} SCOP: d.66.1.3 PDB: 3bbu_A

Probab=98.74  E-value=8.3e-09  Score=76.40  Aligned_cols=54  Identities=26%  Similarity=0.326  Sum_probs=50.5

Q ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEECCHH
Q ss_conf             9888889986212124788788762497878888941353483388478861100
Q gi|254780187|r   93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS  147 (206)
Q Consensus        93 E~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd~I~~~~ks  147 (206)
                      .+|||..|..++|+.|+..|.++|..|+|.|||+.+ .||+.|++||+|+|.-..
T Consensus         8 ~mRlD~~L~~~r~~KtRs~A~~~i~~G~V~vNg~~~-K~s~~v~~gD~i~i~~~~   61 (133)
T 1dm9_A            8 EVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRS-KPSKIVELNATLTLRQGN   61 (133)
T ss_dssp             CCBHHHHHHHTTSSSSHHHHHHHHHTTCEEETTEEC-CTTCBCCTTCEEEEEETT
T ss_pred             CEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEC-CCCCCCCCCCEEEEEECC
T ss_conf             686389998716250499999999869479899646-766668899989998689