HHsearch results for GI: 254780187 and protein with PDBid: 1v9f_A
>1v9f_A Ribosomal large subunit pseudouridine synthase D; RNA binding, lyase; 1.70A {Escherichia coli} SCOP: d.265.1.3 PDB: 2ist_A 1qyu_A 1prz_A
Probab=97.25 E-value=3.5e-05 Score=52.86 Aligned_cols=53 Identities=17% Similarity=0.234 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEECC
Q ss_conf 98888899862121247887887624978788889413534833884788611
Q gi|254780187|r 93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 (206)
Q Consensus 93 E~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd~I~~~~ 145 (206)
-+|||.++-+.-=--|+..++++|..|.|.|||++++.|++.|++||.|.+..
T Consensus 16 G~RLD~~L~~~~~~~sr~~i~k~i~~g~V~vNg~~~~k~~~~l~~gD~I~i~~ 68 (325)
T 1v9f_A 16 GQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVLGGEQVAINA 68 (325)
T ss_dssp -----------------------------------------------------
T ss_pred CCHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEECCCCCEECCCCCEEEECC
T ss_conf 86799999986687799999999986998999999378541656999999826