HHsearch results for GI: 254780187 and protein with PDBid: 3dh3_A

>3dh3_A Ribosomal large subunit pseudouridine synthase F; protein-RNA complex, S4 domain, alpha/beta protein, isomerase, RNA-binding, rRNA processing; HET: FHU; 3.00A {Escherichia coli}

Probab=98.10  E-value=3e-06  Score=59.83  Aligned_cols=51  Identities=22%  Similarity=0.417  Sum_probs=46.9

Q ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEECCH
Q ss_conf             88888998621212478878876249787888894135348338847886110
Q gi|254780187|r   94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK  146 (206)
Q Consensus        94 ~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd~I~~~~k  146 (206)
                      .|||-+|-++|+| |+.+|.+||..|.|.|||++|+ +++.|.+||.|++..+
T Consensus         7 iRL~K~La~~g~~-SRr~ae~lI~~GrV~VNGkvv~-~~~kV~~~D~I~vdg~   57 (290)
T 3dh3_A            7 VRLNKYISESGIC-SRREADRYIEQGNVFLNGKRAT-IGDQVKPGDVVKVNGQ   57 (290)
T ss_dssp             EEHHHHHHTTTSS-CHHHHHHHHHTTCEEETTEECC-TTCEECTTCCEEETTE
T ss_pred             CCHHHHHHHCCCC-HHHHHHHHHHCCEEEECCEECC-CCCCCCCCCEEEECCE
T ss_conf             2599999877884-2999999997796998999957-9889799998999999