PSIBLAST alignment of GI: 254780187 and protein with PDB id: 1i94
>gi|14278533|pdb|1I94|D Chain D, Crystal Structures Of The Small Ribosomal Subunit With Tetracycline, Edeine And If3 Length = 208
>gi|14278554|pdb|1I95|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With Edeine Length = 208
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 3 KRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
+ ++ RR G L+ + PK + R Y PG HGQ+R +PS + ++LR KQ
Sbjct: 2 RYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQ 61
Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
K+++ YG ISE++FR++F+EA + +G T + LESRLD +VYR F + ARQ V
Sbjct: 62 KLRRIYG-ISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLV 120
Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175
H H+ VNGR V++ SYR + GD I V +KS+ L + + + + R V ++S++ + M
Sbjct: 121 RHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVEGM 180
Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
F+R+P +D+ PV LV+EFYSR
Sbjct: 181 KGKFLRLPDR-EDLALPV--NEQLVIEFYSR 208