RPSBLAST alignment for GI: 254780187 and conserved domain: COG0522
>gnl|CDD|30868 COG0522, RpsD, Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis]. Length = 205
Score = 189 bits (480), Expect = 6e-49
Identities = 88/209 (42%), Positives = 122/209 (58%), Gaps = 7/209 (3%)
Query: 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTR-SYGPGLHGQRRKSKPSYFGLQLRAKQKMK 59
M++ K K+ RR+G N W + + + Y PG HGQ R K S +GLQLR KQK++
Sbjct: 1 MARYPGPKKKLSRRLGFNPWLKERLCKERKLPYKPGQHGQERWKKLSDYGLQLREKQKLR 60
Query: 60 KYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHR 119
+YG + EK+FR KEA R +G T NL++ LE RLD +VYR F T ARQ V+H
Sbjct: 61 AFYG-VLEKQFRRYLKEAGRLKGVTGLNLLALLERRLDNVVYRLGFAKTRRQARQLVSHG 119
Query: 120 HVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE--RDVPEYISVNHDNMVA 177
H+LVNG+ VNI SY GD I V++KSK + EA +LA P ++ V+ + +
Sbjct: 120 HILVNGKRVNIPSYLVSPGDEISVREKSKSPIKIKEALELAAQRGIPPAWLEVDEEKLEG 179
Query: 178 TFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
TF R+P + P + L+VEFYS+
Sbjct: 180 TFKRLP---ERSDLPAPINEQLIVEFYSK 205