RPSBLAST alignment of GI: 254780187 and SCOP domain: d2gy9d1

Alignment

>d2gy9d1 d.66.1.2 (D:2-205) Ribosomal protein S4 {Escherichia coli [TaxId: 562]} Length = 204

 Score =  187 bits (475), Expect = 7e-49
 Identities = 79/204 (38%), Positives = 122/204 (59%), Gaps = 10/204 (4%)

Query: 8   KHKIDRRIGENLWGRPK----SPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYG 63
           K K+ RR G +L+ +               PG HG R+  + S +G+QLR KQK+++ YG
Sbjct: 6   KLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKP-RLSDYGVQLREKQKVRRIYG 64

Query: 64  DISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLV 123
            + E++FR+ +KEA R +G+T  NL++ LE RLD +VYR  F  T   ARQ V+H+ ++V
Sbjct: 65  -VLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKAIMV 123

Query: 124 NGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNMVATFVRI 182
           NGR VNI SY+    DV+ +++K+K+ + V  A +LAE R+ P ++ V+   M  TF R 
Sbjct: 124 NGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTFKRK 183

Query: 183 PSSLKDVPYPVIMQPNLVVEFYSR 206
           P    D+   +    +L+VE YS+
Sbjct: 184 PER-SDLSADI--NEHLIVELYSK 204

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-L RNA-binding motif
superfamily: Alpha-L RNA-binding motif
family: Ribosomal protein S4
domain: Ribosomal protein S4
species: Escherichia coli [TaxId: 562]