Query gi|254780189|ref|YP_003064602.1| hypothetical protein CLIBASIA_00370 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 54
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Mon May 23 05:14:21 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780189.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2f0ca2 b.108.1.4 (A:17-62) Ba 6.2 58 0.0042 13.5 0.2 12 2-13 22-33 (46)
2 d3cr5x1 a.39.1.2 (X:0-89) Calc 1.7 2.8E+02 0.02 10.3 0.9 14 38-51 22-35 (90)
3 d1vi2a2 c.58.1.5 (A:5-106) Put 1.6 2.9E+02 0.021 10.2 0.5 20 8-27 8-27 (102)
4 d1ku0a_ c.69.1.18 (A:) Lipase 1.5 2.5E+02 0.018 10.5 -0.3 10 12-21 109-118 (388)
5 d3etja1 b.84.2.1 (A:277-355) N 1.5 2.3E+02 0.017 10.7 -0.6 10 8-17 34-43 (79)
6 d1e8aa_ a.39.1.2 (A:) Calcycli 1.4 3.3E+02 0.024 10.0 0.7 12 40-51 23-34 (87)
7 d1hbxg_ a.4.5.21 (G:) Serum re 1.2 4E+02 0.029 9.6 1.3 12 24-35 54-65 (155)
8 d1puee_ a.4.5.21 (E:) Transcri 1.2 4E+02 0.029 9.6 1.3 12 24-35 56-67 (88)
9 d1otha2 c.78.1.1 (A:185-354) O 1.2 3.5E+02 0.026 9.8 -0.3 8 7-14 1-8 (170)
10 d1r4va_ a.22.1.4 (A:) Hypothet 1.2 4.1E+02 0.03 9.5 1.8 41 8-49 24-64 (151)
No 1
>d2f0ca2 b.108.1.4 (A:17-62) Baseplate protein (bpp), N-terminal domain {Lactococcus phage tp901-1 [TaxId: 35345]}
Probab=6.16 E-value=58 Score=13.51 Aligned_cols=12 Identities=50% Similarity=0.817 Sum_probs=7.7
Q ss_pred CCCCCCCCHHHH
Q ss_conf 863212112332
Q gi|254780189|r 2 KSSDQSIEGKKI 13 (54)
Q Consensus 2 kssdqsiegkki 13 (54)
|..|.||.|||-
T Consensus 22 KTGDEsIaGkKT 33 (46)
T d2f0ca2 22 KTGDETIAGKKT 33 (46)
T ss_dssp SSSCEEECSCEE
T ss_pred CCCCCCCCCCCE
T ss_conf 147622015422
No 2
>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}
Probab=1.72 E-value=2.8e+02 Score=10.34 Aligned_cols=14 Identities=21% Similarity=0.551 Sum_probs=7.5
Q ss_pred HCCCCHHHHHHHHH
Q ss_conf 10411001677766
Q gi|254780189|r 38 NQGRNTISKTEIQE 51 (54)
Q Consensus 38 nqgrntiskteiqe 51 (54)
+-.+.++||.|.++
T Consensus 22 ~G~~~tLsk~Elk~ 35 (90)
T d3cr5x1 22 EGDKHKLKKSELKE 35 (90)
T ss_dssp SSSTTSBCHHHHHH
T ss_pred CCCCCCCCHHHHHH
T ss_conf 89857287999999
No 3
>d1vi2a2 c.58.1.5 (A:5-106) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}
Probab=1.61 E-value=2.9e+02 Score=10.23 Aligned_cols=20 Identities=25% Similarity=0.213 Sum_probs=14.7
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q ss_conf 11233212345666666788
Q gi|254780189|r 8 IEGKKIGHSMSMQRHSKYDK 27 (54)
Q Consensus 8 iegkkighsmsmqrhskydk 27 (54)
+-|..|.||.|-+-|...-+
T Consensus 8 liG~Pi~hS~SP~ihn~~f~ 27 (102)
T d1vi2a2 8 LMAYPIRHSLSPEMQNKALE 27 (102)
T ss_dssp EEESCCTTCSHHHHHHHHHH
T ss_pred EECCCCCCCCCHHHHHHHHH
T ss_conf 87587365559999999999
No 4
>d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=1.53 E-value=2.5e+02 Score=10.51 Aligned_cols=10 Identities=40% Similarity=0.301 Sum_probs=6.4
Q ss_pred HHHHHHHHHH
Q ss_conf 3212345666
Q gi|254780189|r 12 KIGHSMSMQR 21 (54)
Q Consensus 12 kighsmsmqr 21 (54)
-|||||.-+-
T Consensus 109 LIgHS~GGld 118 (388)
T d1ku0a_ 109 IIAHSQGGQT 118 (388)
T ss_dssp EEEETTHHHH
T ss_pred EEECCCCCHH
T ss_conf 8604554587
No 5
>d3etja1 b.84.2.1 (A:277-355) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), C-domain {Escherichia coli [TaxId: 562]}
Probab=1.49 E-value=2.3e+02 Score=10.69 Aligned_cols=10 Identities=40% Similarity=0.700 Sum_probs=6.8
Q ss_pred CCHHHHHHHH
Q ss_conf 1123321234
Q gi|254780189|r 8 IEGKKIGHSM 17 (54)
Q Consensus 8 iegkkighsm 17 (54)
-.|.|+||--
T Consensus 34 RpgRKmGHit 43 (79)
T d3etja1 34 RPGRKVGHLN 43 (79)
T ss_dssp CTTCEEEEEE
T ss_pred CCCCCEEEEE
T ss_conf 8997578798
No 6
>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}
Probab=1.39 E-value=3.3e+02 Score=9.98 Aligned_cols=12 Identities=33% Similarity=0.468 Sum_probs=5.8
Q ss_pred CCCHHHHHHHHH
Q ss_conf 411001677766
Q gi|254780189|r 40 GRNTISKTEIQE 51 (54)
Q Consensus 40 grntiskteiqe 51 (54)
+..+||+.|.++
T Consensus 23 ~~~~Lsk~Elk~ 34 (87)
T d1e8aa_ 23 HFDTLSKGELKQ 34 (87)
T ss_dssp STTEECHHHHHH
T ss_pred CCCEECHHHHHH
T ss_conf 978686999999
No 7
>d1hbxg_ a.4.5.21 (G:) Serum response factor accessory protein 1a, SAP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.18 E-value=4e+02 Score=9.60 Aligned_cols=12 Identities=50% Similarity=0.656 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHH
Q ss_conf 678887776542
Q gi|254780189|r 24 KYDKLCKAERRA 35 (54)
Q Consensus 24 kydklckaerra 35 (54)
.||||+.|-|.-
T Consensus 54 ~YeklSRaLRyY 65 (155)
T d1hbxg_ 54 NYDKLSRALRYY 65 (155)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
T ss_conf 589999999998
No 8
>d1puee_ a.4.5.21 (E:) Transcription factor PU.1, residues 171-259 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=1.18 E-value=4e+02 Score=9.59 Aligned_cols=12 Identities=33% Similarity=0.617 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHH
Q ss_conf 678887776542
Q gi|254780189|r 24 KYDKLCKAERRA 35 (54)
Q Consensus 24 kydklckaerra 35 (54)
.||||+.|-|.-
T Consensus 56 nYeklSRaLRyY 67 (88)
T d1puee_ 56 TYEKMARALRNY 67 (88)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
T ss_conf 589999999999
No 9
>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.15 E-value=3.5e+02 Score=9.84 Aligned_cols=8 Identities=25% Similarity=0.584 Sum_probs=0.0
Q ss_pred CCCHHHHH
Q ss_conf 21123321
Q gi|254780189|r 7 SIEGKKIG 14 (54)
Q Consensus 7 siegkkig 14 (54)
||+|++|.
T Consensus 1 sl~gl~I~ 8 (170)
T d1otha2 1 SLKGLTLS 8 (170)
T ss_dssp CCTTCEEE
T ss_pred CCCCCEEE
T ss_conf 97899999
No 10
>d1r4va_ a.22.1.4 (A:) Hypothetical protein Aq_328 {Aquifex aeolicus [TaxId: 63363]}
Probab=1.15 E-value=4.1e+02 Score=9.54 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 112332123456666667888777654211104110016777
Q gi|254780189|r 8 IEGKKIGHSMSMQRHSKYDKLCKAERRATTNQGRNTISKTEI 49 (54)
Q Consensus 8 iegkkighsmsmqrhskydklckaerrattnqgrntisktei 49 (54)
+...++-.-+..-..--||-|-.|++.|.-| ||..|....+
T Consensus 24 vdK~d~~r~~d~V~~Kl~DLl~va~~~A~~n-~RdvI~~~DL 64 (151)
T d1r4va_ 24 LTDETIELLLNSVKAAFGKLFYGAEQRARWN-GRDFIALADL 64 (151)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTTTHHHHHHHT-TCSEECGGGS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEECCCCC
T ss_conf 6668899999999999999999999988761-7874040468
Done!