HHsearch alignment for GI: 254780190 and conserved domain: TIGR00839
>TIGR00839 aspA aspartate ammonia-lyase; InterPro: IPR004708 A number of enzymes, belonging to the lyase class, for which fumarate is a substrate have been shown , to share a short conserved sequence around a methionine which is probably involved in the catalytic activity of this type of enzymes. Aspartate ammonia-lyase catalyses the conversion of aspartate to fumarate.; GO: 0008797 aspartate ammonia-lyase activity, 0006531 aspartate metabolic process.
Probab=100.00 E-value=0 Score=1320.84 Aligned_cols=457 Identities=43% Similarity=0.691 Sum_probs=454.2
Q ss_pred CEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
Q ss_conf 0257558763386324321779988760877887789--99999999999999999998089998999999999999985
Q gi|254780190|r 5 RNEQDSFGTMKVQEDRYWGAQAQRSLENFKIGEEKQP--LVIIRALGIIKQAAARVNIELGKLDPKIGEAIVKASEEVIN 82 (463)
Q Consensus 5 R~E~D~lG~~~vp~~~~yG~qT~Ra~~nf~i~~~~~~--~~~i~a~~~vK~AaA~an~~~G~l~~~~a~aI~~a~~ei~~ 82 (463)
T Consensus 1 R~E~D~lG~~~i~a~vYYGi~TLRA~ENF~Itn~ki~~~pefi~~~~~VKKAaaLAN~~l~~i~~~~~~AIv~AcDe~l~ 80 (469)
T TIGR00839 1 RIEKDFLGEREIPADVYYGIQTLRASENFFITNDKISDVPEFIRGLAMVKKAAALANVELGLIPEKIAQAIVAACDEILE 80 (469)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 96754577602631000021343332030336861136078999999999999875588743088999999999999985
Q ss_pred -CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -8741126500220242100168730578999999732357986430744653012571234456789998663368789
Q gi|254780190|r 83 -GKLDDHFPLVVWQTGSGTQSNMNVNEVISNRAIEILGGVMGSKSPVHPNDHVNLCQSSNDTYPTAIHIACAERIVHRLL 161 (463)
Q Consensus 83 -g~~~d~Fpv~v~q~GsGTs~nMN~NEVIanra~e~~g~~~g~~~~vHPndhVN~~qStND~~~TA~~la~~~~~~~~L~ 161 (463)
T Consensus 81 ~GK~~DQFivD~~QGGAGTS~NMN~NEViaN~ALE~mGH~KGeY~~~~PndHVN~sQStNDayPta~~Ia~y~~L-~kL~ 159 (469)
T TIGR00839 81 TGKCHDQFIVDVIQGGAGTSVNMNTNEVIANLALEIMGHKKGEYQFLNPNDHVNRSQSTNDAYPTALRIAVYKSL-EKLV 159 (469)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHH
T ss_conf 687100222443338876542230678999988876255146621208865102246666644017899999999-9999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCC
Q ss_conf 99999999999998750786432144001760031999999999999822899999788530066887011045443635
Q gi|254780190|r 162 PTLRNLHVALTKKISDFQDIIKIGRTHTQDATPLTLGQEFSGYATQVKNSIKRIEMTLDGLYELAQGGTAVGTGLNTPVG 241 (463)
Q Consensus 162 ~~l~~L~~aL~~ka~~~~~~~~~GRTHlQ~A~PiTlG~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGGtAvGTGlna~~~ 241 (463)
T Consensus 160 ~~~~~l~~~F~~KA~EF~~viKMGRTqLQDAVPmtlGQEF~ay~~~l~~di~~~~~~~~~l~EvNlGaTAiGTGlN~~~~ 239 (469)
T TIGR00839 160 DTMEDLRDAFKQKAKEFASVIKMGRTQLQDAVPMTLGQEFEAYALLLERDIKNIKRTRQLLLEVNLGATAIGTGLNTPPE 239 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHH
T ss_conf 99999999998888998888621675454532355560489999999999999999987787763475102157787711
Q ss_pred CHHHHHHHHHHHHCCCCEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
Q ss_conf 57999999998608850764207887612412899899999876438887999999827733472167506889875644
Q gi|254780190|r 242 FAEKVAQNIRDITGLPFITAPNKFEALACHDAIAFCHGAINTSATALFKIANDIRFLGSGPRSGLGELMLPENEPGSSIM 321 (463)
Q Consensus 242 f~~~~~~~La~~tgl~~~~a~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~Dirll~SGPr~g~gEi~lp~~q~GSSiM 321 (463)
T Consensus 240 Y~~lvvK~laevtG~p~V~A~~LieAT~~tgAYv~V~g~LKr~avklSKvcNDLRLlsSGPRAGL~EInLP~~QpGSSIM 319 (469)
T TIGR00839 240 YIKLVVKKLAEVTGLPLVPAENLIEATQDTGAYVEVSGALKRIAVKLSKVCNDLRLLSSGPRAGLNEINLPELQPGSSIM 319 (469)
T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCC
T ss_conf 38999887641168864252357775338996266418899999986457656776405775440005764447788437
Q ss_pred CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHH
Q ss_conf 55456246788765200121012355532234576653002344322445899999999999999873490078999988
Q gi|254780190|r 322 PGKVNPTQCEAITQVCAHIFGNHAAITFANSQGHFELNVYKPMIAYNVLQSIQLLSDSIDSFTINCIEGIQARKENIQLS 401 (463)
Q Consensus 322 P~K~NPv~~E~i~~~a~qV~G~d~ti~~a~~~G~lELNv~~Plia~~ll~S~~lL~~a~~~f~~~~i~gl~vn~erm~~~ 401 (463)
T Consensus 320 PgKVNPV~pEvvNQvcF~VIGND~tv~lA~EaGQLqLNVmEPVi~~~lf~S~~Il~na~~~l~~kC~~GItaN~~~c~~Y 399 (469)
T TIGR00839 320 PGKVNPVVPEVVNQVCFKVIGNDTTVTLAAEAGQLQLNVMEPVIGQALFESISILTNAIENLTDKCVEGITANEKICEDY 399 (469)
T ss_pred CCCCCCCHHHHHHHHHCEEECCCHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
T ss_conf 87778721432520420100562588886113510120000689999999999998999988864203106768987401
Q ss_pred HHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHCCHHHHCCC
Q ss_conf 7439736620110553899999999999829998999998589998899985188984388
Q gi|254780190|r 402 LNRSLMLVTALTSKIGYDNASMIAKKAHHNSTTLKEEAIASGLISATEYDLIVKPEKMIYP 462 (463)
Q Consensus 402 l~~s~~lvTaL~p~iGy~~a~~iak~A~~~g~~l~e~~~~~g~ls~~eld~lldP~~mt~P 462 (463)
T Consensus 400 V~nSiGivT~lNPhiGy~~~~~iak~a~~tg~svrd~~Le~~~LTee~LDdIl~~~nl~~P 460 (469)
T TIGR00839 400 VFNSIGIVTALNPHIGYENGALIAKEAAKTGKSVRDVVLEKGLLTEEELDDILSPENLLKP 460 (469)
T ss_pred HHHCCCCEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHCCCCHHHHCCH
T ss_conf 0011102010142014223779999997438833023222455675541010382651271