HHsearch alignment for GI: 254780190 and conserved domain: cd01594
>cd01594 Lyase_I_like Lyase class I_like. Lyase class I_like superfamily of enzymes that catalyze beta-elimination reactions and are active as homotetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. This superfamily contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase. The lyase class I family comprises proteins similar to class II fumarase, aspartase, adenylosuccinate lyase, argininosuccinate lyase, and 3-carboxy-cis, cis-muconate lactonizing enzyme which, for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. Histidine or phenylalanine ammonia-lyase catalyze a beta-elimination of ammonia from histidine and phenylalanine, respectively.
Probab=100.00 E-value=7.8e-41 Score=293.00 Aligned_cols=214 Identities=38% Similarity=0.506 Sum_probs=188.9
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
Q ss_conf 30578999999732357986430744653012571234456789998663368789999999999999987507864321
Q gi|254780190|r 106 VNEVISNRAIEILGGVMGSKSPVHPNDHVNLCQSSNDTYPTAIHIACAERIVHRLLPTLRNLHVALTKKISDFQDIIKIG 185 (463)
Q Consensus 106 ~NEVIanra~e~~g~~~g~~~~vHPndhVN~~qStND~~~TA~~la~~~~~~~~L~~~l~~L~~aL~~ka~~~~~~~~~G 185 (463)
T Consensus 16 i~~~L~~~~~~~~~~-------~~~~~~~~~~~s~~d~~~t~~~~~~~~~l-~~~~~~l~~~~~~l~~~ae~~~~~~~~~ 87 (231)
T cd01594 16 VEEVLAGRAGELAGG-------LHGSALVHKGRSSNDIGTTALRLALRDAL-DDLLPLLKALIDALALKAEAHKGTVMPG 87 (231)
T ss_pred HHHHHHHHHHHHHCC-------CCCCCCCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCEEEC
T ss_conf 999999999998678-------89877778898811399999999999999-9999999999999999999817986336
Q ss_pred HHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCEECCHHH
Q ss_conf 44001760031999999999999822899999788530066887011045443635579999999986088507642078
Q gi|254780190|r 186 RTHTQDATPLTLGQEFSGYATQVKNSIKRIEMTLDGLYELAQGGTAVGTGLNTPVGFAEKVAQNIRDITGLPFITAPNKF 265 (463)
Q Consensus 186 RTHlQ~A~PiTlG~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGGtAvGTGlna~~~f~~~~~~~La~~tgl~~~~a~n~~ 265 (463)
T Consensus 88 ~th~q~A~p~t~g~~l~~~~~~l~~~~~~l~~~----------------------------------------------- 120 (231)
T cd01594 88 RTHLQDAQPVTLGYELRAWAQVLGRDLERLEEA----------------------------------------------- 120 (231)
T ss_pred CCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------------------
T ss_conf 446767731209999999999999999999985-----------------------------------------------
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHH
Q ss_conf 87612412899899999876438887999999827733472167506889875644554562467887652001210123
Q gi|254780190|r 266 EALACHDAIAFCHGAINTSATALFKIANDIRFLGSGPRSGLGELMLPENEPGSSIMPGKVNPTQCEAITQVCAHIFGNHA 345 (463)
Q Consensus 266 ~a~~~rD~~~e~~~~L~~la~~L~Kia~Dirll~SGPr~g~gEi~lp~~q~GSSiMP~K~NPv~~E~i~~~a~qV~G~d~ 345 (463)
T Consensus 121 -------~~a~~~~~l~~~~~~l~~ia~d~~~~~~~~~~~~~~~~~~-~~~gSS~mp~K~Np~~~e~~~~~~~~~~~~~~ 192 (231)
T cd01594 121 -------AVAEALDALALAAAHLSKIAEDLRLLLSGEFGELGEPFLP-GQPGSSIMPQKVNPVAAELVRGLAGLVIGNLV 192 (231)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf -------8999999999999989999999999857675543135566-78866678988796699999999999982399
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5553223457665300234432244589999999999
Q gi|254780190|r 346 AITFANSQGHFELNVYKPMIAYNVLQSIQLLSDSIDS 382 (463)
Q Consensus 346 ti~~a~~~G~lELNv~~Plia~~ll~S~~lL~~a~~~ 382 (463)
T Consensus 193 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~ 229 (231)
T cd01594 193 AVLTALKGGPERDNEDSPSMREILADSLLLLIDALRL 229 (231)
T ss_pred HHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999984571477655897899899899999999997