RPSBLAST alignment of GI: 254780190 and protein with PDBid: 1dof
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1 Length = 403
Score = 133 bits (336), Expect = 6e-32
Identities = 75/413 (18%), Positives = 139/413 (33%), Gaps = 48/413 (11%)
Query: 45 IRALGIIKQAAARVNIELGKLDPKIGEAIVKASEEVINGKLDDHFPLVVWQTGSGTQSNM 104
I A +++A ELG + E + KAS V++ T
Sbjct: 25 INAYLEVERALVCALEELGVAERGCCEKVNKASVSADE----------VYRLERET--GH 72
Query: 105 NVNEVISNRAIEILGGVMGSKSPVHPNDHVNLCQSSNDTYPTAIHIACAERIVHRLLPTL 164
++ ++ +V+ +SND TA + +
Sbjct: 73 DILSLVLLL------------EQKSGCRYVHYGATSNDIIDTAWALLIRRALAAVK-EKA 119
Query: 165 RNLHVALTKKISDFQDIIKIGRTHTQDATPLTLGQEFSGYATQVKNSIKRIEMTLDGLYE 224
R + L ++ + +GRTH Q A P+TLG +F+ Y ++ + +++ + + +
Sbjct: 120 RAVGDQLASMARKYKTLEMVGRTHGQWAEPITLGFKFANYYYELYIACRQLALAEE--FI 177
Query: 225 LAQGGTAVGTGLNTPVGFAEKVAQNIRDITGLPFITAPNKFEALACHDAIAFCHGAINTS 284
A+ G AVGT + E + R + + +A ++ A A+
Sbjct: 178 RAKIGGAVGTMASWG----ELGLEVRRRVAERLGLPHHVITTQVAPRESFAVLASALALM 233
Query: 285 ATALFKIANDIRFLGSGPRSGLGELMLPENEPGSSIMPGKVNPTQCEAITQVCAHIFGNH 344
A ++A +IR L + E GSS MP K NPT E I + ++
Sbjct: 234 AAVFERLAVEIRELSRPEIG-----EVVEGGGGSSAMPHKANPTASERIVSLARYVRALT 288
Query: 345 AAITFANSQGHFELNVYKPMIAYNVLQSIQLLSDSIDSFTINCIEGIQARKENIQLSLNR 404
F N E ++ + L D I + + ++ + +E I +L +
Sbjct: 289 HVA-FENVALWHERDLTNSANERVWIPEALLALDEILTSALRVLKNVYIDEERITENLQK 347
Query: 405 SLMLVTA-----------LTSKIGYDNASMIAKKAHHNSTTLKEEAIASGLIS 446
+L + + Y A + E I L
Sbjct: 348 ALPYILTEFHMNRMIKEGASRAEAYKKAKEVKALTFEYQKWPVERLIEDALSL 400