RPSBLAST alignment of GI: 254780190 and protein with PDBid: 1q5n

 Score =  247 bits (632), Expect = 3e-66
 Identities = 78/430 (18%), Positives = 155/430 (36%), Gaps = 35/430 (8%)

Query: 45  IRALGIIKQAAARVNIELGKLDPKIGEAIVKASEEVINGKLDDHFPLVVWQTGSGTQSNM 104
           +  +   + A A+   ++G +       I +A++  I     D        T +G   N+
Sbjct: 27  VSYMVEAEVALAQAQAQVGVIPQSAATVIQRAAKTAI-----DKIDFDALATATGLAGNI 81

Query: 105 NVNEVISNRAIEILGGVMGSKSPVHPNDHVNLCQSSNDTYPTAIHIACAERIVHRLLPTL 164
            +  V    AI                 +V+   +S D   TA  + C + +   +   +
Sbjct: 82  AIPFVKQLTAIVKDADE-------DAARYVHWGATSQDILDTACILQCRDAL-AIVQNQV 133

Query: 165 RNLHVALTKKISDFQDIIKIGRTHTQDATPLTLGQEFSGYATQVKNSIKRIEMTLDGLYE 224
           +  +     +   ++  + +GRT  Q A P+TLG + + +A+  K  + RI   +     
Sbjct: 134 QQCYETALSQAQTYRHQVMMGRTWLQQALPITLGHKLARWASAFKRDLDRI-NAIKARVL 192

Query: 225 LAQGGTAVGTGLNTPVGFAEKVAQNIRDITGLPFITAPNKFEALACHDAIAFCHGAINTS 284
           +AQ G AVG+   +       V +       L         E     D I      +   
Sbjct: 193 VAQLGGAVGSL-ASLQDQGSIVVEAYAKQLKLGQTACTWHGE----RDRIVEIASVLGII 247

Query: 285 ATALFKIANDIRFLGSGPRSGLGELMLPENEPGSSIMPGKVNPTQCEAITQVCAHIFGNH 344
              + K+A D   +     + + E    +   GSS MP K NP    ++      +    
Sbjct: 248 TGNVGKMARDWSLMMQTEIAEVFEP-TAKGRGGSSTMPHKRNPVAAASVLAAANRVPALM 306

Query: 345 AAITFANSQGHFELNVYKPMIAYNVLQSIQLLSDSIDSFTINCIEGIQARKENIQLSLNR 404
           ++I  +  Q H E ++      +  L  I  L+      T++ ++G++   EN+  ++  
Sbjct: 307 SSIYQSMVQEH-ERSLGAWHAEWLSLPEIFQLTAGALERTLDVLKGMEVNAENMHQNIEC 365

Query: 405 SLMLV------TALTSKIGYDNASMIAKKAHHNSTT--------LKEEAIASGLISATEY 450
           +  L+       AL   +G  NA  + + A   +          + +        + ++ 
Sbjct: 366 THGLIMAEAVMMALAPHMGRLNAHHVVEAACKTAVAEQKHLKDIISQVDEVKQYFNPSQL 425

Query: 451 DLIVKPEKMI 460
           D I KPE  +
Sbjct: 426 DEIFKPESYL 435