RPSBLAST alignment of GI: 254780190 and protein with PDBid: 1vdk

 Score =  440 bits (1132), Expect = e-124
 Identities = 248/462 (53%), Positives = 324/462 (70%), Gaps = 3/462 (0%)

Query: 4   TRNEQDSFGTMKVQEDRYWGAQAQRSLENFKIGEEK--QPLVIIRALGIIKQAAARVNIE 61
            R E+D+ G ++V  D+YWGAQ QRSLENF+IG ++   PL IIRA G++K+AAAR N+E
Sbjct: 3   YRIERDTMGEVRVPADKYWGAQTQRSLENFRIGTDRFRMPLEIIRAYGMLKKAAARANLE 62

Query: 62  LGKLDPKIGEAIVKASEEVINGKLDDHFPLVVWQTGSGTQSNMNVNEVISNRAIEILGGV 121
           LG+L  +I +AI++A+EEV+ GK DDHFPLVV+QTGSGTQ+NMNVNEVI+NRA EILG  
Sbjct: 63  LGELPEEIAKAIIQAAEEVVQGKWDDHFPLVVFQTGSGTQTNMNVNEVIANRASEILGKP 122

Query: 122 MGSKSPVHPNDHVNLCQSSNDTYPTAIHIACAERIVHRLLPTLRNLHVALTKKISDFQDI 181
           +GSK   HPNDHVN  QSSNDT+PTA+++A A  +  RL P +  L    T K   F  I
Sbjct: 123 LGSK-YAHPNDHVNRGQSSNDTFPTAMYVAVALALHQRLYPAVEGLIRTFTAKAQAFDQI 181

Query: 182 IKIGRTHTQDATPLTLGQEFSGYATQVKNSIKRIEMTLDGLYELAQGGTAVGTGLNTPVG 241
           +K+GRTH  DA P+TLGQE   +A Q+K ++  ++    GLY LA GGTAVGTGLN    
Sbjct: 182 VKVGRTHLMDAVPITLGQEIGSWAAQLKTTLAAVKEMEKGLYNLAIGGTAVGTGLNAHPR 241

Query: 242 FAEKVAQNIRDITGLPFITAPNKFEALACHDAIAFCHGAINTSATALFKIANDIRFLGSG 301
           F E VA+ + + TGLPF  A N+F ALA HD +    GAI T A AL KI ND+R+L SG
Sbjct: 242 FGELVAKYLAEETGLPFRVAENRFAALAAHDELVNVMGAIRTLAGALMKIGNDVRWLASG 301

Query: 302 PRSGLGELMLPENEPGSSIMPGKVNPTQCEAITQVCAHIFGNHAAITFANSQGHFELNVY 361
           P +G+GE+ +P NEPGSSIMPGKVNPTQ EA+T V   ++GN   + FA SQG+F+LNVY
Sbjct: 302 PYAGIGEITIPANEPGSSIMPGKVNPTQVEALTMVVVRVYGNDHTVAFAGSQGNFQLNVY 361

Query: 362 KPMIAYNVLQSIQLLSDSIDSFTINCIEGIQARKENIQLSLNRSLMLVTALTSKIGYDNA 421
           KP++AY+ L+SI LL+D++ SF  +  +GI+   E I+  L ++ ML TAL   IGYD A
Sbjct: 362 KPVMAYSTLESINLLADAVASFDAHLAQGIEPNLERIEEYLQKNPMLATALNKAIGYDKA 421

Query: 422 SMIAKKAHHNSTTLKEEAIASGLISATEYDLIVKPEKMIYPH 463
           + I KKA     TLK+ A+  G ++  E+D IV P ++  PH
Sbjct: 422 AEIVKKALKEKKTLKQAALELGYLTEEEFDRIVVPMRLAKPH 463