RPSBLAST alignment of GI: 254780190 and protein with PDBid: 1yfm

>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, multi-subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1 Length = 488
 Score =  480 bits (1237), Expect = e-136
 Identities = 287/464 (61%), Positives = 350/464 (75%), Gaps = 3/464 (0%)

Query: 1   MTNTRNEQDSFGTMKVQEDRYWGAQAQRSLENFKIG--EEKQPLVIIRALGIIKQAAARV 58
            ++ R E D+FG + V  D+YWGAQ QRS +NFKIG   E+ PL ++ A G++K++AA V
Sbjct: 25  NSSFRTETDAFGEIHVPADKYWGAQTQRSFQNFKIGGARERMPLPLVHAFGVLKKSAAIV 84

Query: 59  NIELGKLDPKIGEAIVKASEEVINGKLDDHFPLVVWQTGSGTQSNMNVNEVISNRAIEIL 118
           N  LG LDPKI +AI +A++EV +GKLDDHFPLVV+QTGSGTQSNMN NEVISNRAIEIL
Sbjct: 85  NESLGGLDPKISKAIQQAADEVASGKLDDHFPLVVFQTGSGTQSNMNANEVISNRAIEIL 144

Query: 119 GGVMGSKSPVHPNDHVNLCQSSNDTYPTAIHIACAERIVHRLLPTLRNLHVALTKKISDF 178
           GG +GSK  VHPN+H N  QSSNDT+PT +HIA + +I + L+P L NL  AL  K  +F
Sbjct: 145 GGKIGSK-QVHPNNHCNQSQSSNDTFPTVMHIAASLQIQNELIPELTNLKNALEAKSKEF 203

Query: 179 QDIIKIGRTHTQDATPLTLGQEFSGYATQVKNSIKRIEMTLDGLYELAQGGTAVGTGLNT 238
             I+KIGRTH QDATPLTLGQEFSGY  QV+N I+R+  +L  L  LAQGGTAVGTGLNT
Sbjct: 204 DHIVKIGRTHLQDATPLTLGQEFSGYVQQVENGIQRVAHSLKTLSFLAQGGTAVGTGLNT 263

Query: 239 PVGFAEKVAQNIRDITGLPFITAPNKFEALACHDAIAFCHGAINTSATALFKIANDIRFL 298
             GF  K+A+ I   TGL F TAPN+FEALA HDAI  C GA+NT A +LFKIA DIR+L
Sbjct: 264 KPGFDVKIAEQISKETGLKFQTAPNRFEALAAHDAIVECSGALNTLACSLFKIAQDIRYL 323

Query: 299 GSGPRSGLGELMLPENEPGSSIMPGKVNPTQCEAITQVCAHIFGNHAAITFANSQGHFEL 358
           GSGPR G  ELMLPENEPGSSIMPGKVNPTQ EA+TQVC  + GN+AAITFA SQG FEL
Sbjct: 324 GSGPRCGYHELMLPENEPGSSIMPGKVNPTQNEALTQVCVQVMGNNAAITFAGSQGQFEL 383

Query: 359 NVYKPMIAYNVLQSIQLLSDSIDSFTINCIEGIQARKENIQLSLNRSLMLVTALTSKIGY 418
           NV+KP++  N+L SI+L++D+  SF ++C+EGI+A +  I   L +SLMLVTAL  KIGY
Sbjct: 384 NVFKPVMIANLLNSIRLITDAAYSFRVHCVEGIKANEPRIHELLTKSLMLVTALNPKIGY 443

Query: 419 DNASMIAKKAHHNSTTLKEEAIASGLISATEYDLIVKPEKMIYP 462
           D AS +AK AH    TLKE A+  G+++  E+D  V PE M+ P
Sbjct: 444 DAASKVAKNAHKKGITLKESALELGVLTEKEFDEWVVPEHMLGP 487