RPSBLAST alignment of GI: 254780190 and protein with PDBid: 1yfm
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, multi-subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1 Length = 488
Score = 480 bits (1237), Expect = e-136
Identities = 287/464 (61%), Positives = 350/464 (75%), Gaps = 3/464 (0%)
Query: 1 MTNTRNEQDSFGTMKVQEDRYWGAQAQRSLENFKIG--EEKQPLVIIRALGIIKQAAARV 58
++ R E D+FG + V D+YWGAQ QRS +NFKIG E+ PL ++ A G++K++AA V
Sbjct: 25 NSSFRTETDAFGEIHVPADKYWGAQTQRSFQNFKIGGARERMPLPLVHAFGVLKKSAAIV 84
Query: 59 NIELGKLDPKIGEAIVKASEEVINGKLDDHFPLVVWQTGSGTQSNMNVNEVISNRAIEIL 118
N LG LDPKI +AI +A++EV +GKLDDHFPLVV+QTGSGTQSNMN NEVISNRAIEIL
Sbjct: 85 NESLGGLDPKISKAIQQAADEVASGKLDDHFPLVVFQTGSGTQSNMNANEVISNRAIEIL 144
Query: 119 GGVMGSKSPVHPNDHVNLCQSSNDTYPTAIHIACAERIVHRLLPTLRNLHVALTKKISDF 178
GG +GSK VHPN+H N QSSNDT+PT +HIA + +I + L+P L NL AL K +F
Sbjct: 145 GGKIGSK-QVHPNNHCNQSQSSNDTFPTVMHIAASLQIQNELIPELTNLKNALEAKSKEF 203
Query: 179 QDIIKIGRTHTQDATPLTLGQEFSGYATQVKNSIKRIEMTLDGLYELAQGGTAVGTGLNT 238
I+KIGRTH QDATPLTLGQEFSGY QV+N I+R+ +L L LAQGGTAVGTGLNT
Sbjct: 204 DHIVKIGRTHLQDATPLTLGQEFSGYVQQVENGIQRVAHSLKTLSFLAQGGTAVGTGLNT 263
Query: 239 PVGFAEKVAQNIRDITGLPFITAPNKFEALACHDAIAFCHGAINTSATALFKIANDIRFL 298
GF K+A+ I TGL F TAPN+FEALA HDAI C GA+NT A +LFKIA DIR+L
Sbjct: 264 KPGFDVKIAEQISKETGLKFQTAPNRFEALAAHDAIVECSGALNTLACSLFKIAQDIRYL 323
Query: 299 GSGPRSGLGELMLPENEPGSSIMPGKVNPTQCEAITQVCAHIFGNHAAITFANSQGHFEL 358
GSGPR G ELMLPENEPGSSIMPGKVNPTQ EA+TQVC + GN+AAITFA SQG FEL
Sbjct: 324 GSGPRCGYHELMLPENEPGSSIMPGKVNPTQNEALTQVCVQVMGNNAAITFAGSQGQFEL 383
Query: 359 NVYKPMIAYNVLQSIQLLSDSIDSFTINCIEGIQARKENIQLSLNRSLMLVTALTSKIGY 418
NV+KP++ N+L SI+L++D+ SF ++C+EGI+A + I L +SLMLVTAL KIGY
Sbjct: 384 NVFKPVMIANLLNSIRLITDAAYSFRVHCVEGIKANEPRIHELLTKSLMLVTALNPKIGY 443
Query: 419 DNASMIAKKAHHNSTTLKEEAIASGLISATEYDLIVKPEKMIYP 462
D AS +AK AH TLKE A+ G+++ E+D V PE M+ P
Sbjct: 444 DAASKVAKNAHKKGITLKESALELGVLTEKEFDEWVVPEHMLGP 487