RPSBLAST alignment of GI: 254780190 and protein with PDBid: 1yis

>1yis_A Adenylosuccinate lyase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.40A {Caenorhabditis elegans} Length = 478

 Score = 99.2 bits (246), Expect = 2e-21
 Identities = 53/352 (15%), Positives = 114/352 (32%), Gaps = 24/352 (6%)

Query: 129 HPNDHVNLCQSSNDTYPTAIHIACAERIVHRLLPTLRNLHVALTKKISDFQDIIKIGRTH 188
                ++L  +S      A  IA  + I   +L     +   L       ++++ +GRTH
Sbjct: 97  TAAGIIHLGATSCFVQDNADLIAYRDSI-DHILKRFATVIDRLAAFSLKNKEVVTVGRTH 155

Query: 189 TQDATPLTLGQEFSGYATQVKNSIKRIEMTLDGLYEL--AQGGTAVGTGLNTPVGFAEKV 246
            Q A+ +T+G+    +A ++  + + +    D +             + L    G   KV
Sbjct: 156 YQTASLVTVGKRGVLWAQELLMAFQSLSEFRDKMRFRGIKGATGTQDSFLTLFAGDESKV 215

Query: 247 AQNIRDITGLPFITAPNKFEA-LACHDAIAFCHGAINTSATALFKIANDIRFLGSGPRSG 305
                 +T     +               +    +++    A  K+  DIR        G
Sbjct: 216 EALDELVTKKANFSNRFLITGQTYSRQQDSQLVFSLSLLGAAAKKVCTDIRV---LQAFG 272

Query: 306 LGELMLPENEPGSSIMPGKVNPTQCEAITQVCAHIFGNHAAITFANSQGHFELNVYKPMI 365
                  +++ GSS MP K NP + E    +   +           +    E  +     
Sbjct: 273 ELLEPFEKDQIGSSAMPYKKNPMKSERCCALSRKLINAPQEALTILADQGLERTLDDSAG 332

Query: 366 AYNVLQSIQLLSDSIDSFTINCIEGIQARKENIQLSLNRSLM------LVTALTSK-IGY 418
              ++  + L ++++ +   N  EG+  + +N++  +   +        +  LT + +  
Sbjct: 333 RRMLIPDVLLTAEALLTTLQNIFEGLSVQTDNVKKIVEDEIAFLGLEKAMMMLTEEGVDR 392

Query: 419 DNASMI----AKKAHHNSTTLKEEAI------ASGLISATEYDLIVKPEKMI 460
             A  +    A +A     T K +            +      L+  P    
Sbjct: 393 QQAHAVIRKTALEAKQLQATQKVDIRQTMADPFFDSVRDRVVGLVNNPINFT 444