HHsearch alignment for GI: 254780191 and conserved domain: PRK01584
>PRK01584 alanyl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=1817.34 Aligned_cols=580 Identities=38% Similarity=0.694 Sum_probs=549.2
Q ss_pred CCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHCC
Q ss_conf 78789999999999978988911667566778710023014347554005887999998511154322489878634346
Q gi|254780191|r 2 SNVSSIRTTFLEFFQKNGHELLPSSSLIPCNDPTLMFTNSGMVPFKNIFTGQEKPVYQAVTTVQKCVRAGGKHNDLDNVG 81 (898)
Q Consensus 2 ~s~~eiR~~fl~fF~~~~H~~~~s~slvp~~d~~llft~Agm~~fk~~f~G~~~p~~~r~~~~QkCiR~ggkhnDld~VG 81 (898)
T Consensus 1 mt~~eiR~~Fl~fF~~kgH~~v~ssslvp~~dptllftnAGm~~Fk~~f~G~~~p~~~r~~~~QkCiR~----~DldnVG 76 (593)
T PRK01584 1 MTLDELRKKYIDFFKSKGHVEIAGKSLVPENDPTVLFNTAGMQPLVPYLLGEPHPSGDMLVNVQKCLRT----GDIDEVG 76 (593)
T ss_pred CCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCEEEC----CCHHHCC
T ss_conf 988999999999998789888378771779999835740451017123258889999974567531333----7563368
Q ss_pred CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH--HHCCCCHHHEEEEECCC------HHHHHHHHHHHCCCCHHHEEE
Q ss_conf 4885001788854223147537889998998613--34189812379997188------289999756634999899753
Q gi|254780191|r 82 RTNRHHTFFEMLGNFSFGGYFKERAIQLAWDLLT--KEFDLDQRRLYITVYDE------DEEAFKLWKKISGLSADKIIR 153 (898)
Q Consensus 82 ~t~rH~TfFEMlGn~SfgdYfK~eai~~awe~lt--~~~~l~~~~l~vtv~~~------D~e~~~iW~~~~gi~~~~i~~ 153 (898)
T Consensus 77 -~~~H~TfFEMLGn~SFgdYfK~eaI~~awe~lt~~~~l~l~~~rl~vtv~~~D~~~~~D~E~~~iW~~~-Gi~~~~I~~ 154 (593)
T PRK01584 77 -DLSHLTFFEMLGNWSLGAYFKEESVKYSFEFLTSPDYLNIPKDKLYVSVFEGDEDIPRDEETAKIWESL-GISKDRIFY 154 (593)
T ss_pred -CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHHC-CCCHHHEEE
T ss_conf -887527775054452331148999999999806632048883247999960587665448899999981-998999464
Q ss_pred CCCCCCCC-CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 57866654-57999998770467885385568988877788982689600112344304788756576653101757999
Q gi|254780191|r 154 ITTNDNFW-SMAETGPCGPCSEIFFDQGECIPGGLPGSSEEGERYIEIWNLVFMQFEQQNKQERFILPKMSIDTGMGLER 232 (898)
Q Consensus 154 ~~~~dNfW-~~g~~GpcGPcsEi~~d~g~~~~~~~~~~~~~~~r~lEiwNlVFmq~~~~~~g~~~~Lp~~~IDTGmGLER 232 (898)
T Consensus 155 ~~~~dNfW~~~G~~GPCGPcsEi~~d~g~~~~~~~~~~~~d~~r~lEIWNlVFmqy~r~~~G~~~pLp~k~VDTGmGLER 234 (593)
T PRK01584 155 LSREHNFWGPVGETGPCGPDTEIFVDTGKPKCSVNCRITCSCGKYFEIWNNVFMQYNKDEDGNYEELKRKCVDTGMGIER 234 (593)
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECEEECCCCCEEECCCCCCCCCCCHHH
T ss_conf 57667710038998899875789974677766778898788887699865411352126999721688774036868999
Q ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCHHHHHHHHHH
Q ss_conf 99998879853005769999999997306785433--5024899999898999987403--3334446412577889999
Q gi|254780191|r 233 MATVLQEKTNNYDIDLFKHLIQASEQVTGMKYEGN--NIVNHRVIVDHLRSSSFLIADG--ILPANEGRGYVLRRIMRRA 308 (898)
Q Consensus 233 l~~vlqg~~s~ydtD~f~pii~~i~~~~g~~y~~~--~~~~~rvIaDH~Ra~~f~I~DG--v~PsN~GrGYvlRrilRRa 308 (898)
T Consensus 235 i~~vlQg~~snYdtD~F~pii~~i~~~s~~~y~~~~~~~~a~rvIADH~Rs~~f~IaDG~~v~PsN~grGYvLRriiRRa 314 (593)
T PRK01584 235 TIAFLQGKSSVYDTDAFTPIIKRIEKISGKIYGQNEEDDRSIRIIADHIKAACFILADPKVVLPSNVGQGYVLRRLIRRS 314 (593)
T ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHEEEEEECCCCEECCCCCCCCCHHHHHHHHH
T ss_conf 99998299974203110689999999858866776666431543112123046895369743577788870489999999
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
Q ss_conf 99999848743310456899999864555555764678899998748989999998999999998611546424574379
Q gi|254780191|r 309 MCYARLLGYTEPLMMHLLPALCTEMGSAYPELIQAKLLIEETLRSEDERFGKTLDRGLVLLDGVLSHLGKDEILNGDVAF 388 (898)
Q Consensus 309 ~r~~~~lg~~~~fl~~lv~~v~~~m~~~ypeL~~~~~~I~~ii~~EE~~F~~TL~~G~~~l~~~i~~~~~~~~lsg~~af 388 (898)
T Consensus 315 ~r~~~~Lg~~~~fL~~lv~~vi~~~~~~ypeL~~~~~~I~~ii~~EEe~F~~TL~~G~~~~~~~i~~~~-~~~l~g~~af 393 (593)
T PRK01584 315 IRYAKKLGIESHFLADLVDSVEEIYASFYKELTEKKDFIKKELNKEEEKFFKTLRKGEQEFIKMIPQLS-SKIIPGDIAF 393 (593)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCEEE
T ss_conf 999987388711599999999999877788888899999999999999999999999999999998655-7867875237
Q ss_pred EEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCC
Q ss_conf 98524588889999876650774435888999999999764443311001201356788873048862643444443211
Q gi|254780191|r 389 KLYDTHGLPLDIMQDILCARGLAGIDIISFNQALEEQRSRARAHSLGLGSGTTEKIWFSLKEKYGATQFIGYDLLRGSKF 468 (898)
Q Consensus 389 ~LyDTyGfP~dlt~eia~e~gi~~vD~~~f~~~m~~qk~~sr~~~~~~~~~~~~~~~~~~~~~~~~t~F~GYe~~~~~~~ 468 (898)
T Consensus 394 ~LYDTyGfP~dlt~eia~e~Gl~-vD~~~F~~~~~~~~~~sr~g~~---------------------------------- 438 (593)
T PRK01584 394 KLYDTYGFPYELTEELASEYGFT-VDREGFDEHFKKHQKVSKKGGD---------------------------------- 438 (593)
T ss_pred EEECCCCCCHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHCCC----------------------------------
T ss_conf 86305697999999999984972-1588999999999998873797----------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCEEEEEECCCCEEECCCCCCCCCCEEEECCEEEEEECCCC
Q ss_conf 12221113444544555655348999974781320004797699997375200036876566514540424898522456
Q gi|254780191|r 469 MKEDRKVLCQKPPIDLTNGVSSIVKAIVQQGEIVEEAVSGQKVEVVFDQTPFYAEAGGQLGDTGCAIGDGIRLQITDVQK 548 (898)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~s~v~~i~~~~~~v~~~~~g~~~~ivLd~T~FY~E~GGQ~~D~G~i~~~~~~~~V~dv~k 548 (898)
T Consensus 439 --------------------------------------------~~~---------kG~l~d~~---------------- 449 (593)
T PRK01584 439 --------------------------------------------KVF---------KGGLADHS---------------- 449 (593)
T ss_pred --------------------------------------------EEE---------ECCCCCCC----------------
T ss_conf --------------------------------------------067---------61520254----------------
Q ss_pred CCCEEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEECCCCCCCC
Q ss_conf 55338998510467875567338884212556777520136889999975212544444553002430000024767899
Q gi|254780191|r 549 KAEGIFVHHAIVERGILRTEMSLVLTIDYQNRRQLSINHSATHLLHHALSTILGSHVSQNGSCITPDGLRFDVTHSKPIT 628 (898)
Q Consensus 549 ~~~g~i~H~~~~~~g~l~~g~~V~~~VD~~rR~~~~~~HTatHlL~~alr~vLG~hv~Q~GS~v~~~~lrfDfsh~~~lt 628 (898)
T Consensus 450 --------------------------------~~~~~~HTATHLLh~ALR~VLG~hV~Q~GS~v~~~~lRfDfth~~~lt 497 (593)
T PRK01584 450 --------------------------------YETTKLHTATHLLHKALQLVLGDHVRQKGSNITAERLRFDFSHPRKMT 497 (593)
T ss_pred --------------------------------CCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEECCCCCC
T ss_conf --------------------------------001351548999999999862875598785457981799962799999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCEECCCCCCCCCHHHHHHH
Q ss_conf 99999999999898873045304661232221000355443155562489984476778553101562225886460110
Q gi|254780191|r 629 SAELKSIEDNVNDIIAQNLPVVTRIMNREDAIASGAAALLGTKYNDRVRVVSVEYEDGGVHSSALCGGTHVSSTGEIMLL 708 (898)
Q Consensus 629 ~eel~~IE~~vN~~I~~n~~V~~~~~~~~eA~~~ga~alfgekygd~VRVV~I~~~d~~~~S~ElCGGTHV~nTgeIG~f 708 (898)
T Consensus 498 ~eei~~IE~~vN~~I~~~~~V~~~~~~~~eA~~~ga~alfgekY~d~VRVv~i~-----~~S~ElCGGTHv~~TgeIg~f 572 (593)
T PRK01584 498 DDEIKKVEDIVNLQIKNDLSVKKEVMSLEEAKEKGAMALFGEKYEDVVSVYEID-----GFSIEVCGGPHVENTSELGTF 572 (593)
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCEEECCCCCCCEEEEEEEC-----CEEEECCCCCCCCCHHHCCCE
T ss_conf 999999999999999838962599824999997499262289999866899889-----967865786133877334467
Q ss_pred HEECCCCCCCCCEEEEEEECH
Q ss_conf 011012126882899997168
Q gi|254780191|r 709 YIVSESSIRAGIRRIEAITGQ 729 (898)
Q Consensus 709 kIise~si~sGvRRIeavtG~ 729 (898)
T Consensus 573 kI~~e~si~~GvrRIeAvtGd 593 (593)
T PRK01584 573 KIQKEQSSSSGVRRIKAILID 593 (593)
T ss_pred EEEEECCCCCCCEEEEEEECC
T ss_conf 999767660784789998178