HHsearch alignment for GI: 254780191 and conserved domain: PRK13902
>PRK13902 alaS lanyl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=2077.07 Aligned_cols=782 Identities=30% Similarity=0.507 Sum_probs=719.4
Q ss_pred CCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHEEECCCCCCCCCCC-CCCCCCCCCCCCCCCCEECCCCCCCHHHC
Q ss_conf 78789999999999978988911667566778710023014347554005-88799999851115432248987863434
Q gi|254780191|r 2 SNVSSIRTTFLEFFQKNGHELLPSSSLIPCNDPTLMFTNSGMVPFKNIFT-GQEKPVYQAVTTVQKCVRAGGKHNDLDNV 80 (898)
Q Consensus 2 ~s~~eiR~~fl~fF~~~~H~~~~s~slvp~~d~~llft~Agm~~fk~~f~-G~~~p~~~r~~~~QkCiR~ggkhnDld~V 80 (898)
T Consensus 58 ~~~~eiR~~Fl~fF~~~gH~~v~s~plvp~~~ddllftnAgm~~Fkp~~~~G~~~pp~~~~~~sQkCiR~----nDlenV 133 (898)
T PRK13902 58 YSLDEMREKFLSFFEKRGHTRIKRYPVVARWRDDVYLTIASIYDFQPWVTSGIVPPPANPLVISQPCIRL----NDIDNV 133 (898)
T ss_pred CCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEECCCHHCHHHHCCCCCCCCCCCCCCCCCCEEC----CCHHHC
T ss_conf 7899999999999976899891785637899998057603513240443388758999972565223004----767543
Q ss_pred CCCCCCHHHHHHHHHHHHCC-----CCHHHHHHHHHHHHHHHCCCCHHHEEEEECCCHHHHHHHHHHHCCCCHHHEEECC
Q ss_conf 64885001788854223147-----5378899989986133418981237999718828999975663499989975357
Q gi|254780191|r 81 GRTNRHHTFFEMLGNFSFGG-----YFKERAIQLAWDLLTKEFDLDQRRLYITVYDEDEEAFKLWKKISGLSADKIIRIT 155 (898)
Q Consensus 81 G~t~rH~TfFEMlGn~Sfgd-----YfK~eai~~awe~lt~~~~l~~~~l~vtv~~~D~e~~~iW~~~~gi~~~~i~~~~ 155 (898)
T Consensus 134 G~t~rHhTfFEMlGn~SFg~~d~~~YfK~eaI~~awe~lt~~lgi~~~~i~----------------------------- 184 (898)
T PRK13902 134 GRTGRHLTSFEMMAHHAFNYPDKEVYWKDETVELCFEFFTKELGIDPEEIT----------------------------- 184 (898)
T ss_pred CCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHEE-----------------------------
T ss_conf 888774354523765414899756470789999999998701287879945-----------------------------
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 86665457999998770467885385568988877788982689600112344304788756576653101757999999
Q gi|254780191|r 156 TNDNFWSMAETGPCGPCSEIFFDQGECIPGGLPGSSEEGERYIEIWNLVFMQFEQQNKQERFILPKMSIDTGMGLERMAT 235 (898)
Q Consensus 156 ~~dNfW~~g~~GpcGPcsEi~~d~g~~~~~~~~~~~~~~~r~lEiwNlVFmq~~~~~~g~~~~Lp~~~IDTGmGLERl~~ 235 (898)
T Consensus 185 ~ken~W~~g--GpcGPcsEi~~------------------~GlEiwNlVFmq~~~~~~g~~~~Lp~k~IDTGmGLERia~ 244 (898)
T PRK13902 185 FKESPWEGG--GNAGPCFEVLV------------------RGLELATLVFMQYKKDKGGKYVEMPLKIVDTGYGLERIAW 244 (898)
T ss_pred EECCCCCCC--CCCCCCEEEEE------------------CCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 624574789--99988635651------------------9797442202341136999733087776346856999999
Q ss_pred HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC--------------------------------------------CHH
Q ss_conf 988798530057699999999973067854335--------------------------------------------024
Q gi|254780191|r 236 VLQEKTNNYDIDLFKHLIQASEQVTGMKYEGNN--------------------------------------------IVN 271 (898)
Q Consensus 236 vlqg~~s~ydtD~f~pii~~i~~~~g~~y~~~~--------------------------------------------~~~ 271 (898)
T Consensus 245 vlQg~~tnydt-~F~pii~~~~~~~g~~~~~~~~~~~~~~~~g~~d~~~~~~~~~~~~~va~~~~~~~~~~~~~~~~~~~ 323 (898)
T PRK13902 245 ASQGTPTAYDA-VFGEIVDKLKKLAGVEEPDEEILAEAARLAGLMDIEEIGDLRELRQKVAEKIGIDVEELEELIEPLEA 323 (898)
T ss_pred HHCCCCCHHHH-HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
T ss_conf 99099953776-42899999999738986503677776654045662100258899988766406651332200243223
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999989899998740333344464125778899999999984874331045689999986455555576467889999
Q gi|254780191|r 272 HRVIVDHLRSSSFLIADGILPANEGRGYVLRRIMRRAMCYARLLGYTEPLMMHLLPALCTEMGSAYPELIQAKLLIEETL 351 (898)
Q Consensus 272 ~rvIaDH~Ra~~f~I~DGv~PsN~GrGYvlRrilRRa~r~~~~lg~~~~fl~~lv~~v~~~m~~~ypeL~~~~~~I~~ii 351 (898)
T Consensus 324 ~~vIaDH~R~~~f~i~DGv~PsN~grGYvlRrilRRa~r~~~~Lg~~~~-L~~Lv~~~~~~m~~~ypel~~~~~~I~~ii 402 (898)
T PRK13902 324 VYAIADHTRTLAFMLGDGIVPSNVGEGYLARLVIRRTLRLLKDLGLDVP-LSELVDMQIEYLKEDYPELKENRDYILDIV 402 (898)
T ss_pred CCEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_conf 3021318999999996588778788744999999999999999397132-999999999987415768898699999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCH-HHHHHHHHHHHHHHH
Q ss_conf 8748989999998999999998611546424574379985245888899998766507744358-889999999997644
Q gi|254780191|r 352 RSEDERFGKTLDRGLVLLDGVLSHLGKDEILNGDVAFKLYDTHGLPLDIMQDILCARGLAGIDI-ISFNQALEEQRSRAR 430 (898)
Q Consensus 352 ~~EE~~F~~TL~~G~~~l~~~i~~~~~~~~lsg~~af~LyDTyGfP~dlt~eia~e~gi~~vD~-~~f~~~m~~qk~~sr 430 (898)
T Consensus 403 ~~EEe~F~~TL~~G~~~l~~~~~~---~~~i~g~~af~LYDTyGfP~Dlt~eia~e~gi~-vD~~~~F~~~~~~~~~~~~ 478 (898)
T PRK13902 403 DLEEEKYRETLERGRRIVERLAKK---KKEIPLDDLIELYDSHGIPPEIVKEIAKKKGVE-VEIPDNFYSLVAARHEKAE 478 (898)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC---CCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCC-CCCCCHHHHHHHHHHHHHH
T ss_conf 999999999999999999999851---898888999999870498989999999982980-1464429999999999876
Q ss_pred HHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCE
Q ss_conf 43311001201356788873048862643444443211122211134445445556553489999747813200047976
Q gi|254780191|r 431 AHSLGLGSGTTEKIWFSLKEKYGATQFIGYDLLRGSKFMKEDRKVLCQKPPIDLTNGVSSIVKAIVQQGEIVEEAVSGQK 510 (898)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~t~F~GYe~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~v~~i~~~~~~v~~~~~g~~ 510 (898)
T Consensus 479 ~~~~~~~------~~~~~~~~~~~T~~~~Y~~~~~~--------------------e~~a~Vl~i~~~------------ 520 (898)
T PRK13902 479 KKEEEVL------PLADRLKDLPETRLLFYEDPYMR--------------------EFEAKVLGVIDN------------ 520 (898)
T ss_pred HHHCCCC------CHHHHHHCCCCCEEEEECCCCEE--------------------EEEEEEEEEECC------------
T ss_conf 4103121------00457753798503430246502--------------------578999998435------------
Q ss_pred EEEEECCCCEEECCCCCCCCCCEEEECCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHCCCHH
Q ss_conf 99997375200036876566514540424898522456553389985104678755673388842125567775201368
Q gi|254780191|r 511 VEVVFDQTPFYAEAGGQLGDTGCAIGDGIRLQITDVQKKAEGIFVHHAIVERGILRTEMSLVLTIDYQNRRQLSINHSAT 590 (898)
Q Consensus 511 ~~ivLd~T~FY~E~GGQ~~D~G~i~~~~~~~~V~dv~k~~~g~i~H~~~~~~g~l~~g~~V~~~VD~~rR~~~~~~HTat 590 (898)
T Consensus 521 -~vVLd~T~FY~E~GGQ~~D~G~i~~~~~~~~V~dv~k~-~g~i~H~--v~~~~~~~g~~V~~~VD~~rR~~~~~nHTaT 596 (898)
T PRK13902 521 -YVVLDQTAFYPEGGGQPADTGVLVVNGKEIKVVDVQKV-GGVIVHV--VEGEPPPKGDEVKGEIDWERRYRLMRHHTAT 596 (898)
T ss_pred -EEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEE-CCEEEEE--ECCCCCCCCCEEEEEECHHHHHHHHHHHHHH
T ss_conf -49961575445678977880279968937999732774-8989999--5788888899899999989998887600388
Q ss_pred HHHHHHHHHCCCCCCCCCCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHH--
Q ss_conf 899999752125444445530024300000247678999999999999989887304530466123222100035544--
Q gi|254780191|r 591 HLLHHALSTILGSHVSQNGSCITPDGLRFDVTHSKPITSAELKSIEDNVNDIIAQNLPVVTRIMNREDAIASGAAALL-- 668 (898)
Q Consensus 591 HlL~~alr~vLG~hv~Q~GS~v~~~~lrfDfsh~~~lt~eel~~IE~~vN~~I~~n~~V~~~~~~~~eA~~~ga~alf-- 668 (898)
T Consensus 597 HlL~~alr~vLG~hv~Q~Gs~v~~~~lRfDfsh~~~lt~eel~~IE~~vN~~I~~n~~V~~~~~~~~eA~~~~a~alf~g 676 (898)
T PRK13902 597 HILLAAARKVLGDHVWQAGAQKDTDKARLDITHYKRITREEVKEIERLANRIVMENRPVKVEWMDRNEAEQKYGFRLYQG 676 (898)
T ss_pred HHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCHHHHCC
T ss_conf 88779999872775684032337980899624888789899999999999999848962799947899976154033227
Q ss_pred HHCCCCCEEEEEECCCCCCCCCEECCCCCCCCCHHHHHHHHEECCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHH
Q ss_conf 31555624899844767785531015622258864601100110121268828999971689999999999999999998
Q gi|254780191|r 669 GTKYNDRVRVVSVEYEDGGVHSSALCGGTHVSSTGEIMLLYIVSESSIRAGIRRIEAITGQRARSHLMGQDEKLKSLASF 748 (898)
Q Consensus 669 gekygd~VRVV~I~~~d~~~~S~ElCGGTHV~nTgeIG~fkIise~si~sGvRRIeavtG~~A~~~~~~~~~~l~~la~~ 748 (898)
T Consensus 677 G~kygd~VRVV~ig-----~~s~ElCGGTHV~nTgeIG~fkIise~si~~GVRRIEavtG~~A~~~~~~~~~~l~~~a~~ 751 (898)
T PRK13902 677 GVVPGKEIRVVEIE-----GWDVEACGGTHVKNTGEIGPIKILKTERIQDGVERLEFAAGDAAVEYIQELEDILREAAEI 751 (898)
T ss_pred CCCCCCCEEEEEEC-----CCEEECCCCCCCCCCCCEEEEEEEEECCEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHH
T ss_conf 87888735898657-----8036523798778703134389998552637816999980789999999999999999998
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 39998899999999999999999999999999876365-----3555369527999957999789999999999754997
Q gi|254780191|r 749 LKVSQGNVVGRVEEIWEEYRKLQLIHAKRKLQLNVEDL-----SCHKIADVNFMSHIISEVDSKELKSVMDALQKKIQSG 823 (898)
Q Consensus 749 L~~~~~~i~~ki~~L~~e~K~l~k~~~k~k~~~~~~~~-----~~~~i~~~~~i~~~~~~~d~~~Lr~l~d~l~~k~~~~ 823 (898)
T Consensus 752 L~~~~~~l~~~v~~l~~e~k~l~kei~~lk~~l~~~~~~~l~~~~~~i~g~~v~~~~~-~~d~~~lr~~~~~l~~k--~~ 828 (898)
T PRK13902 752 LGVPPEQLPETVKRFFEEWKEQKKEIEKLRKELAELLIYELLAEAEEVGGVKVVVEEV-DADDDELQKIANKLSKK--GG 828 (898)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEEEC-CCCHHHHHHHHHHHHCC--CC
T ss_conf 5899889999999999999999999999999999998888775451638879999983-79999999999986357--95
Q ss_pred EEEEEEECCCCEEEEEEEECHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHCCCCC-CCHHHHHHHHHHHHHHH
Q ss_conf 89999953898179999867789726798999999998834999999810114589-99878899999999986
Q gi|254780191|r 824 IIMLVGISKEKKASVLIVVTEDLLDRFNAVDLARLSAKVLGGGGGGGRPHMAQSGG-PNGNKADQAIAGVASFL 896 (898)
Q Consensus 824 vvvL~~~~~~~k~~ivv~vs~~~~~~~~A~~lik~ia~~l~GGgGGGkpd~AQgGG-~~~~~l~eal~~vk~~L 896 (898)
T Consensus 829 vvvl~~-~~~~~~~~v~~~~~~~--~i~A~~ivk~v~~~~-gGkGGGrp~~AQgGG~~d~~kl~eAL~~a~~~i 898 (898)
T PRK13902 829 VVVLIN-SGGYGRVIVASGGEKA--GVNAGEIVRELAREL-GGKGGGKPTLAQGGGSPDVEKIDEALSRALSLI 898 (898)
T ss_pred EEEEEE-ECCCCEEEEEEECCCC--CCCHHHHHHHHHHHC-CCCCCCCHHHEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 899998-0599389999975658--979899999999855-997679388760589998789999999999759