HHsearch alignment for GI: 254780191 and conserved domain: pfam01411

>pfam01411 tRNA-synt_2c tRNA synthetases class II (A). Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only alanyl-tRNA synthetases.
Probab=97.68  E-value=9e-06  Score=64.02  Aligned_cols=107  Identities=21%  Similarity=0.149  Sum_probs=80.5

Q ss_pred             CCCHHH---HHHHHHHHCCCCHHHEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEHHH-
Q ss_conf             188289---9997566349998997535786665457999998770467885385568988877788982689600112-
Q gi|254780191|r  130 YDEDEE---AFKLWKKISGLSADKIIRITTNDNFWSMAETGPCGPCSEIFFDQGECIPGGLPGSSEEGERYIEIWNLVF-  205 (898)
Q Consensus       130 ~~~D~e---~~~iW~~~~gi~~~~i~~~~~~dNfW~~g~~GpcGPcsEi~~d~g~~~~~~~~~~~~~~~r~lEiwNlVF-  205 (898)
T Consensus        93 YfK~eai~~a~e~lt~~l~i~~~~l~~t---~~~~d----~ea~~~w~~~~------------------g~~~~~i~~~~  147 (545)
T pfam01411        93 YFKEEAIEFAWELLTKELGLDPERLYVT---VYEWD----DEAGPIWEKIV------------------GGPEERILRFG  147 (545)
T ss_pred             CHHHHHHHHHHHHHHHHHCCCHHHEEEE---ECCCC----CCHHHHHHHHC------------------CCCHHHCEECC
T ss_conf             4378999999999765617886676999---88886----33667688862------------------99999906267


Q ss_pred             --HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             --3443047887565766531017579999999887985300576999999999730678
Q gi|254780191|r  206 --MQFEQQNKQERFILPKMSIDTGMGLERMATVLQEKTNNYDIDLFKHLIQASEQVTGMK  263 (898)
Q Consensus       206 --mq~~~~~~g~~~~Lp~~~IDTGmGLERl~~vlqg~~s~ydtD~f~pii~~i~~~~g~~  263 (898)
T Consensus       148 ~~~nfw~~g~-~gpcgPcseI~~d~G~e~~~~~~~~~~~~~~-~~~~EiwNlVF~q~~~~  205 (545)
T pfam01411       148 DKDNFWEMGD-TGPCGPCSEIDYDRGEEIGGWPSGGTPTADD-DRFLEIWNLVFMQFNRE  205 (545)
T ss_pred             CCCCEEECCC-CCCCCCCEEEEECCCCCCCCCCCCCCCCCCC-CEEHHHHHHHHHHHCCC
T ss_conf             7776057789-8899776899976672026888889988888-78288999999995876