HHsearch alignment for GI: 254780191 and conserved domain: pfam01411
>pfam01411 tRNA-synt_2c tRNA synthetases class II (A). Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only alanyl-tRNA synthetases.
Probab=97.68 E-value=9e-06 Score=64.02 Aligned_cols=107 Identities=21% Similarity=0.149 Sum_probs=80.5
Q ss_pred CCCHHH---HHHHHHHHCCCCHHHEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEHHH-
Q ss_conf 188289---9997566349998997535786665457999998770467885385568988877788982689600112-
Q gi|254780191|r 130 YDEDEE---AFKLWKKISGLSADKIIRITTNDNFWSMAETGPCGPCSEIFFDQGECIPGGLPGSSEEGERYIEIWNLVF- 205 (898)
Q Consensus 130 ~~~D~e---~~~iW~~~~gi~~~~i~~~~~~dNfW~~g~~GpcGPcsEi~~d~g~~~~~~~~~~~~~~~r~lEiwNlVF- 205 (898)
T Consensus 93 YfK~eai~~a~e~lt~~l~i~~~~l~~t---~~~~d----~ea~~~w~~~~------------------g~~~~~i~~~~ 147 (545)
T pfam01411 93 YFKEEAIEFAWELLTKELGLDPERLYVT---VYEWD----DEAGPIWEKIV------------------GGPEERILRFG 147 (545)
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHEEEE---ECCCC----CCHHHHHHHHC------------------CCCHHHCEECC
T ss_conf 4378999999999765617886676999---88886----33667688862------------------99999906267
Q ss_pred --HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf --3443047887565766531017579999999887985300576999999999730678
Q gi|254780191|r 206 --MQFEQQNKQERFILPKMSIDTGMGLERMATVLQEKTNNYDIDLFKHLIQASEQVTGMK 263 (898)
Q Consensus 206 --mq~~~~~~g~~~~Lp~~~IDTGmGLERl~~vlqg~~s~ydtD~f~pii~~i~~~~g~~ 263 (898)
T Consensus 148 ~~~nfw~~g~-~gpcgPcseI~~d~G~e~~~~~~~~~~~~~~-~~~~EiwNlVF~q~~~~ 205 (545)
T pfam01411 148 DKDNFWEMGD-TGPCGPCSEIDYDRGEEIGGWPSGGTPTADD-DRFLEIWNLVFMQFNRE 205 (545)
T ss_pred CCCCEEECCC-CCCCCCCEEEEECCCCCCCCCCCCCCCCCCC-CEEHHHHHHHHHHHCCC
T ss_conf 7776057789-8899776899976672026888889988888-78288999999995876