HHsearch alignment for GI: 254780191 and conserved domain: pfam07973
>pfam07973 tRNA_SAD Threonyl and Alanyl tRNA synthetase second additional domain. The catalytically active from of threonyl/alanyl tRNA synthetase is a dimer. Within the tRNA synthetase class II dimer, the bound tRNA interacts with both monomers making specific interactions with the catalytic domain, the C-terminal domain, and this domain (the second additional domain). The second additional domain is comprised of a pair of perpendicularly orientated antiparallel beta sheets, of four and three strands, respectively, that surround a central alpha helix that forms the core of the domain.
Probab=99.05 E-value=7.2e-11 Score=103.94 Aligned_cols=44 Identities=45% Similarity=0.678 Sum_probs=41.6
Q ss_pred EEEEEECCCCCCCCCEECCCCCCCCCHHHHHHHHEECCCCCCCCCEEEE
Q ss_conf 4899844767785531015622258864601100110121268828999
Q gi|254780191|r 676 VRVVSVEYEDGGVHSSALCGGTHVSSTGEIMLLYIVSESSIRAGIRRIE 724 (898)
Q Consensus 676 VRVV~I~~~d~~~~S~ElCGGTHV~nTgeIG~fkIise~si~sGvRRIe 724 (898)
T Consensus 1 vrvv~ig-----~~~~~~C~GtHV~nT~~I~~fki~k~~~~~~g~~RI~ 44 (44)
T pfam07973 1 VRVVRIG-----DFDVDLCGGTHVPNTGEIGAFKILKGDSKNKGLQRIY 44 (44)
T ss_pred CEEEEEC-----CEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEECC
T ss_conf 9799989-----9198787795878825201299997144828759629