HHsearch results for GI: 254780191 and protein with PDBid: 1nnh_A
>1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1
Probab=92.24 E-value=0.31 Score=26.84 Aligned_cols=89 Identities=19% Similarity=0.232 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHCCCEECCCCCCC-CC---CCCCHHEEECCCCCCC------CCCCCCCC---------CCCCCCCCCC
Q ss_conf 8999999999997898891166756-67---7871002301434755------40058879---------9999851115
Q gi|254780191|r 5 SSIRTTFLEFFQKNGHELLPSSSLI-PC---NDPTLMFTNSGMVPFK------NIFTGQEK---------PVYQAVTTVQ 65 (898)
Q Consensus 5 ~eiR~~fl~fF~~~~H~~~~s~slv-p~---~d~~llft~Agm~~fk------~~f~G~~~---------p~~~r~~~~Q 65 (898)
++|-+.+-+||.++|-.-|. -|++ |. .++. ....|.++|+ +++|-+.+ ....|+=..-
T Consensus 19 s~i~~~iR~ff~~~~f~EV~-tPil~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~L~~Spql~~k~~l~~g~~~vf~I~ 95 (294)
T 1nnh_A 19 TKILEYMTDFFVKEGFKWLL-PVIISPITDPLWPD--PAGEGMEPAEVEIYGVKMRLTHSMILHKQLAIAMGLKKIFVLS 95 (294)
T ss_dssp HHHHHHHHHHHHHTTCEEEC-CCCEESCCCCCCSC--TTCCCCCCCEEEETTEEEEECSCSHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEC-CCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999999999988999984-87345667776776--5567663563567896675157888889899873025644650
Q ss_pred CCEECCCCCCCHHHCCCCCCCHHHHHHHH-HHHHCCCC
Q ss_conf 43224898786343464885001788854-22314753
Q gi|254780191|r 66 KCVRAGGKHNDLDNVGRTNRHHTFFEMLG-NFSFGGYF 102 (898)
Q Consensus 66 kCiR~ggkhnDld~VG~t~rH~TfFEMlG-n~SfgdYf 102 (898)
||.|+. +.+. .|.||.+=|-||= =.+|.||.
T Consensus 96 ~~FR~E----~~~~--~~~rH~~EFtmLE~e~~~~d~~ 127 (294)
T 1nnh_A 96 PNIRLE----SRQK--DDGRHAYEFTQLDFEVERAKME 127 (294)
T ss_dssp EEECCC----CGGG--CSSSCCSEEEEEEEEEETCCHH
T ss_pred CEECCC----CCCC--CCCCCCCCCCCCEEEEECCHHH
T ss_conf 456478----7888--8775540014650598400198