HHsearch results for GI: 254780191 and protein with PDBid: 1qf6_A

>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, zinc, mRNA, aminoacylation, translational regulation, protein/RNA, ligase/RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1
Probab=98.92  E-value=1.9e-08  Score=83.26  Aligned_cols=137  Identities=20%  Similarity=0.368  Sum_probs=94.9

Q ss_pred             HCCCHHHHHHHHHHHCCCC-CCCCCCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCH
Q ss_conf             2013688999997521254-444455300243000002476789999999999999898873045304661232221000
Q gi|254780191|r  585 INHSATHLLHHALSTILGS-HVSQNGSCITPDGLRFDVTHSKPITSAELKSIEDNVNDIIAQNLPVVTRIMNREDAIASG  663 (898)
Q Consensus       585 ~~HTatHlL~~alr~vLG~-hv~Q~GS~v~~~~lrfDfsh~~~lt~eel~~IE~~vN~~I~~n~~V~~~~~~~~eA~~~g  663 (898)
                      -.||+.|||.+|+.++++. ++.- |-.++ +-+=.||.-..++|+++|.+||+.++++|.+|+|+....++.++|.+..
T Consensus        71 ~~~S~a~vl~~Av~~l~p~~kl~i-gp~i~-~Gfyyd~~~~~~~t~~dl~~Ie~~M~~ii~~~~~i~r~~~~~~~A~~~f  148 (642)
T 1qf6_A           71 IRHSCAHLLGHAIKQLWPHTKMAI-GPVID-NGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETF  148 (642)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCEECC-CCEET-TEEEEEEECSSCCCHHHHHHHHHHHHHHHHHTCBEEEEECCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEE-CCCCC-CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHH
T ss_conf             999999999999999769987997-78658-8789997149999999999999999999732586279997578999987


Q ss_pred             H-------HHHHHHC--CCCCEEEEEECCCCCCCCCEECCCCCCCCCHHHHHHHHEECCCCC-------CCCCEEEEEEE
Q ss_conf             3-------5544315--556248998447677855310156222588646011001101212-------68828999971
Q gi|254780191|r  664 A-------AALLGTK--YNDRVRVVSVEYEDGGVHSSALCGGTHVSSTGEIMLLYIVSESSI-------RAGIRRIEAIT  727 (898)
Q Consensus       664 a-------~alfgek--ygd~VRVV~I~~~d~~~~S~ElCGGTHV~nTgeIG~fkIise~si-------~sGvRRIeavt  727 (898)
                      .       ..+..+.  ..+.|-+-..++     | +.+|-|.||.|||.|+.||+++.++-       ..-..||..++
T Consensus       149 ~~~~~~~k~~li~~~~~~~~~i~~y~~g~-----f-~Dlc~Gphvp~T~~ik~fkL~~~~~ayw~gd~~~~~l~Riyg~a  222 (642)
T 1qf6_A          149 ANRGESYKVSILDENIAHDDKPGLYFHEE-----Y-VDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTA  222 (642)
T ss_dssp             HHHTCHHHHHHHHHHSCTTCCCEEEEETT-----E-EECCSSCCCSBGGGCCSEEEEEEEEEEGGGCTTSCEEEEEEEEE
T ss_pred             HHCCCCHHHHHHHCCCCCCCCEEEEECCC-----E-EEECCCCCCCCCCCCCHHHHHHCCCEEECCCCCHHHHHHHHHHH
T ss_conf             63135045666530356676337996287-----7-98448877898766621467531312765887236767677664


Q ss_pred             CH
Q ss_conf             68
Q gi|254780191|r  728 GQ  729 (898)
Q Consensus       728 G~  729 (898)
                      =.
T Consensus       223 f~  224 (642)
T 1qf6_A          223 WA  224 (642)
T ss_dssp             CS
T ss_pred             HC
T ss_conf             16