HHsearch results for GI: 254780191 and protein with PDBid: 2e1b_A
>2e1b_A PH0108, 216AA long hypothetical alanyl-tRNA synthetase; zinc-binding motif, trans-editing enzyme, structural genomics, NPPSFA; 2.70A {Pyrococcus horikoshii} SCOP: b.43.3.6 d.67.1.2
Probab=100.00 E-value=0 Score=379.13 Aligned_cols=185 Identities=29% Similarity=0.386 Sum_probs=167.2
Q ss_pred EEEECCCCEEECCCCCCCCCCEEEECCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHCCCHHH
Q ss_conf 99973752000368765665145404248985224565533899851046787556733888421255677752013688
Q gi|254780191|r 512 EVVFDQTPFYAEAGGQLGDTGCAIGDGIRLQITDVQKKAEGIFVHHAIVERGILRTEMSLVLTIDYQNRRQLSINHSATH 591 (898)
Q Consensus 512 ~ivLd~T~FY~E~GGQ~~D~G~i~~~~~~~~V~dv~k~~~g~i~H~~~~~~g~l~~g~~V~~~VD~~rR~~~~~~HTatH 591 (898)
.|+||+|||||||||||+|+|+|.+ ..|+++.+..+|.++|.+.. .+.+.+|++|.++|||+||+.+|++|||+|
T Consensus 29 ~vvld~TiFypegGGQp~D~G~I~~----~~~~~~~~~~~g~i~H~~~~-~~~~~~G~~V~~~iD~~~R~~~~~~HTa~H 103 (216)
T 2e1b_A 29 AILLDQTIFYPTGGGQPHDRGTING----VEVLDVYKDEEGNVWHVVKE-PEKFKVGDEVELKIDWDYRYKLMRIHTGLH 103 (216)
T ss_dssp CCCBSCCCSCCCCTTCCCCCEEETT----EEEEEEECCTTCCCEEEESC-GGGCCSSSCEEEEECHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCCCCCEEEEEE----EEEEEEEECCCCEEEEEECC-CCCCCCCCEEEEEECHHHHHHHHHHCHHHH
T ss_conf 8999588656886996896478945----69999997489739985424-799898999999999899787987686989
Q ss_pred HHHHHHHHCCCCCCCC-CCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHH
Q ss_conf 9999975212544444-553002430000024767899999999999998988730453046612322210003554431
Q gi|254780191|r 592 LLHHALSTILGSHVSQ-NGSCITPDGLRFDVTHSKPITSAELKSIEDNVNDIIAQNLPVVTRIMNREDAIASGAAALLGT 670 (898)
Q Consensus 592 lL~~alr~vLG~hv~Q-~GS~v~~~~lrfDfsh~~~lt~eel~~IE~~vN~~I~~n~~V~~~~~~~~eA~~~ga~alfge 670 (898)
||++|+++++|.+++| .||.+.++++||||+++..++++ ..+||..+|++|.++.||.+.+
T Consensus 104 ll~~a~~~~~g~~~~~~~g~~~~~~~~~~d~~~~~~l~~~-~~~ie~~~n~~I~~~~~v~~~~----------------- 165 (216)
T 2e1b_A 104 LLEHVLNEVLGEGNWQLVGSGMSVEKGRYDIAYPENLNKY-KEQIISLFNKYVDEGGEVKIWW----------------- 165 (216)
T ss_dssp HHHHHHHHHHTTTSCEEEECCBCSSEEEEEEECSSCGGGG-HHHHHHHHHHHHHHCCBEEEEE-----------------
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCHH-HHHHHHHHHHHHCCCCEEEEEE-----------------
T ss_conf 8888878644887631146651344442116403368589-9999999987531484688985-----------------
Q ss_pred CCCCCEEEEEECCCCCCCCCEECCCCCCCCCHHHHHHHHEECCCCCCCCCEEEEEE
Q ss_conf 55562489984476778553101562225886460110011012126882899997
Q gi|254780191|r 671 KYNDRVRVVSVEYEDGGVHSSALCGGTHVSSTGEIMLLYIVSESSIRAGIRRIEAI 726 (898)
Q Consensus 671 kygd~VRVV~I~~~d~~~~S~ElCGGTHV~nTgeIG~fkIise~si~sGvRRIeav 726 (898)
.+.+|+|+|++ ++.++||||||+||+|||.|+|++.+++++|+||||+.
T Consensus 166 --~~~~Rvv~I~~-----~~~~~CgGTHV~~T~eIg~i~I~~~~~~~kg~~Rie~~ 214 (216)
T 2e1b_A 166 --EGDRRYTQIRD-----FEVIPCGGTHVKDIKEIGHIKKLKRSSIGRGKQRLEMW 214 (216)
T ss_dssp --SSSCEEEEETT-----SCEECCCSCCCSBGGGTCCEEEEEEEEEETTEEEEEEE
T ss_pred --CCCEEEEEECC-----EEEEECCCCCCCCHHHCCCEEEEEEEEEECCCEEEEEE
T ss_conf --49768888898-----89870388056868754388999998693894889999