HHsearch results for GI: 254780191 and protein with PDBid: 2e1b_A

>2e1b_A PH0108, 216AA long hypothetical alanyl-tRNA synthetase; zinc-binding motif, trans-editing enzyme, structural genomics, NPPSFA; 2.70A {Pyrococcus horikoshii} SCOP: b.43.3.6 d.67.1.2
Probab=100.00  E-value=0  Score=379.13  Aligned_cols=185  Identities=29%  Similarity=0.386  Sum_probs=167.2

Q ss_pred             EEEECCCCEEECCCCCCCCCCEEEECCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHCCCHHH
Q ss_conf             99973752000368765665145404248985224565533899851046787556733888421255677752013688
Q gi|254780191|r  512 EVVFDQTPFYAEAGGQLGDTGCAIGDGIRLQITDVQKKAEGIFVHHAIVERGILRTEMSLVLTIDYQNRRQLSINHSATH  591 (898)
Q Consensus       512 ~ivLd~T~FY~E~GGQ~~D~G~i~~~~~~~~V~dv~k~~~g~i~H~~~~~~g~l~~g~~V~~~VD~~rR~~~~~~HTatH  591 (898)
                      .|+||+|||||||||||+|+|+|.+    ..|+++.+..+|.++|.+.. .+.+.+|++|.++|||+||+.+|++|||+|
T Consensus        29 ~vvld~TiFypegGGQp~D~G~I~~----~~~~~~~~~~~g~i~H~~~~-~~~~~~G~~V~~~iD~~~R~~~~~~HTa~H  103 (216)
T 2e1b_A           29 AILLDQTIFYPTGGGQPHDRGTING----VEVLDVYKDEEGNVWHVVKE-PEKFKVGDEVELKIDWDYRYKLMRIHTGLH  103 (216)
T ss_dssp             CCCBSCCCSCCCCTTCCCCCEEETT----EEEEEEECCTTCCCEEEESC-GGGCCSSSCEEEEECHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCCCCCCCCCCCEEEEEE----EEEEEEEECCCCEEEEEECC-CCCCCCCCEEEEEECHHHHHHHHHHCHHHH
T ss_conf             8999588656886996896478945----69999997489739985424-799898999999999899787987686989


Q ss_pred             HHHHHHHHCCCCCCCC-CCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHH
Q ss_conf             9999975212544444-553002430000024767899999999999998988730453046612322210003554431
Q gi|254780191|r  592 LLHHALSTILGSHVSQ-NGSCITPDGLRFDVTHSKPITSAELKSIEDNVNDIIAQNLPVVTRIMNREDAIASGAAALLGT  670 (898)
Q Consensus       592 lL~~alr~vLG~hv~Q-~GS~v~~~~lrfDfsh~~~lt~eel~~IE~~vN~~I~~n~~V~~~~~~~~eA~~~ga~alfge  670 (898)
                      ||++|+++++|.+++| .||.+.++++||||+++..++++ ..+||..+|++|.++.||.+.+                 
T Consensus       104 ll~~a~~~~~g~~~~~~~g~~~~~~~~~~d~~~~~~l~~~-~~~ie~~~n~~I~~~~~v~~~~-----------------  165 (216)
T 2e1b_A          104 LLEHVLNEVLGEGNWQLVGSGMSVEKGRYDIAYPENLNKY-KEQIISLFNKYVDEGGEVKIWW-----------------  165 (216)
T ss_dssp             HHHHHHHHHHTTTSCEEEECCBCSSEEEEEEECSSCGGGG-HHHHHHHHHHHHHHCCBEEEEE-----------------
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCHH-HHHHHHHHHHHHCCCCEEEEEE-----------------
T ss_conf             8888878644887631146651344442116403368589-9999999987531484688985-----------------


Q ss_pred             CCCCCEEEEEECCCCCCCCCEECCCCCCCCCHHHHHHHHEECCCCCCCCCEEEEEE
Q ss_conf             55562489984476778553101562225886460110011012126882899997
Q gi|254780191|r  671 KYNDRVRVVSVEYEDGGVHSSALCGGTHVSSTGEIMLLYIVSESSIRAGIRRIEAI  726 (898)
Q Consensus       671 kygd~VRVV~I~~~d~~~~S~ElCGGTHV~nTgeIG~fkIise~si~sGvRRIeav  726 (898)
                        .+.+|+|+|++     ++.++||||||+||+|||.|+|++.+++++|+||||+.
T Consensus       166 --~~~~Rvv~I~~-----~~~~~CgGTHV~~T~eIg~i~I~~~~~~~kg~~Rie~~  214 (216)
T 2e1b_A          166 --EGDRRYTQIRD-----FEVIPCGGTHVKDIKEIGHIKKLKRSSIGRGKQRLEMW  214 (216)
T ss_dssp             --SSSCEEEEETT-----SCEECCCSCCCSBGGGTCCEEEEEEEEEETTEEEEEEE
T ss_pred             --CCCEEEEEECC-----EEEEECCCCCCCCHHHCCCEEEEEEEEEECCCEEEEEE
T ss_conf             --49768888898-----89870388056868754388999998693894889999